RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 CGNQ9P2M7 1197 aaKnown RBP11.24□□□□□ -0.61
RPE-201ENST00000354506 MAST3O60307 1309 aa11.23□□□□□ -0.61
RPE-201ENST00000354506 NEDD4P46934 1319 aa11.23□□□□□ -0.61
RPE-201ENST00000354506 CCAR1Q8IX12 1150 aaKnown RBP11.23□□□□□ -0.61
RPE-201ENST00000354506 USP28Q96RU2 1077 aa11.23□□□□□ -0.61
RPE-201ENST00000354506 STRCP1A6NGW2 1772 aa11.23□□□□□ -0.61
RPE-201ENST00000354506 GOLIM4O00461 696 aa11.23□□□□□ -0.61
RPE-201ENST00000354506 ME1P48163 572 aa11.23□□□□□ -0.61
RPE-201ENST00000354506 SYCP1Q15431 976 aa11.23□□□□□ -0.61
RPE-201ENST00000354506 LRRC8AQ8IWT6 810 aa11.23□□□□□ -0.61
RPE-201ENST00000354506 CCDC112Q8NEF3 446 aa11.23□□□□□ -0.61
RPE-201ENST00000354506 A0A1B0GVL5 298 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 RNF113AO15541 343 aaKnown RBP11.22□□□□□ -0.61
RPE-201ENST00000354506 DMTNQ08495 405 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 LRRC24Q50LG9 513 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 ZNF215Q9UL58 517 aaPredicted RBP11.22□□□□□ -0.61
RPE-201ENST00000354506 DCCP43146 1447 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 M0R2C6 588 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 EYA2O00167 538 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 TTLL5Q6EMB2 1281 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 PROSER2Q86WR7 435 aaPredicted RBP11.22□□□□□ -0.61
RPE-201ENST00000354506 FMR1NBQ8N0W7 255 aaPredicted RBP11.22□□□□□ -0.61
RPE-201ENST00000354506 LRRN4CLQ8ND94 238 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 RGS22Q8NE09 1264 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 SHANK3Q9BYB0 1731 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 CABP4P57796 275 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 TTLL7Q6ZT98 887 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 AOPEPQ8N6M6 819 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 OSBP2Q969R2 916 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 CWC25Q9NXE8 425 aaPredicted RBP11.22□□□□□ -0.61
RPE-201ENST00000354506 RTEL1Q9NZ71 1219 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 CARMIL3Q8ND23 1372 aa11.22□□□□□ -0.61
RPE-201ENST00000354506 SKILP12757 684 aa11.21□□□□□ -0.61
RPE-201ENST00000354506 FAM160A1Q05DH4 1040 aa11.21□□□□□ -0.61
RPE-201ENST00000354506 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
RPE-201ENST00000354506 ELF2Q15723 593 aa11.21□□□□□ -0.61
RPE-201ENST00000354506 STX1AQ16623 288 aa11.21□□□□□ -0.61
RPE-201ENST00000354506 C4AP0C0L4 1744 aa11.21□□□□□ -0.61
RPE-201ENST00000354506 C4BP0C0L5 1744 aa11.21□□□□□ -0.61
RPE-201ENST00000354506 TNS2Q63HR2 1409 aa11.21□□□□□ -0.61
RPE-201ENST00000354506 DDX17Q92841 729 aaKnown RBP11.21□□□□□ -0.62
RPE-201ENST00000354506 A0A1W2PQ27 194 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 A0A1W2PQ64 194 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 A0A1W2PQD8 194 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 SMC2O95347 1197 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 RXRAP19793 462 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 ADALQ6DHV7 355 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 SDF4Q9BRK5 362 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 PCDHA7Q9UN72 937 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 HPS5Q9UPZ3 1129 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 TNS3Q68CZ2 1445 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 A0A1B0GUL7 405 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 CEP135Q66GS9 1140 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 ZNF396Q96N95 335 aaPredicted RBP11.2□□□□□ -0.62
RPE-201ENST00000354506 EPC1Q9H2F5 836 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 CCDC69A6NI79 296 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 SMTNL1A8MU46 457 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 NYAP1Q6ZVC0 841 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 FSIP1Q8NA03 581 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 LINC00301Q8NCQ3 95 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 ZNF594Q96JF6 807 aaPredicted RBP11.2□□□□□ -0.62
RPE-201ENST00000354506 BPIFA3Q9BQP9 254 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 PODXL2Q9NZ53 605 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 PAXBP1Q9Y5B6 917 aa11.2□□□□□ -0.62
RPE-201ENST00000354506 ERVV-2B6SEH9 535 aa11.19□□□□□ -0.62
RPE-201ENST00000354506 IFIT1P09914 478 aaKnown RBP11.19□□□□□ -0.62
RPE-201ENST00000354506 NBPF11Q86T75 865 aa11.19□□□□□ -0.62
RPE-201ENST00000354506 ISCA1Q9BUE6 129 aa11.19□□□□□ -0.62
RPE-201ENST00000354506 PUS3Q9BZE2 481 aaKnown RBP11.19□□□□□ -0.62
RPE-201ENST00000354506 NEMFO60524 1076 aa11.19□□□□□ -0.62
RPE-201ENST00000354506 CCZ1BP86790 482 aa11.19□□□□□ -0.62
RPE-201ENST00000354506 CCZ1P86791 482 aaPredicted RBP11.19□□□□□ -0.62
RPE-201ENST00000354506 MB21D2Q8IYB1 491 aaPredicted RBP11.19□□□□□ -0.62
RPE-201ENST00000354506 CABLES1Q8TDN4 633 aa11.19□□□□□ -0.62
RPE-201ENST00000354506 A1BGP04217 495 aa11.18□□□□□ -0.62
RPE-201ENST00000354506 CHMP4CQ96CF2 233 aa11.18□□□□□ -0.62
RPE-201ENST00000354506 ZFP91Q96JP5 570 aaPredicted RBP11.18□□□□□ -0.62
RPE-201ENST00000354506 POLR3EQ9NVU0 708 aa11.18□□□□□ -0.62
RPE-201ENST00000354506 SPATA31A3Q5VYP0 1347 aa11.18□□□□□ -0.62
RPE-201ENST00000354506 WDR19Q8NEZ3 1342 aa11.18□□□□□ -0.62
RPE-201ENST00000354506 AKAP11Q9UKA4 1901 aa11.18□□□□□ -0.62
RPE-201ENST00000354506 CHRNA2Q15822 529 aa11.18□□□□□ -0.62
RPE-201ENST00000354506 PLA2G12BQ9BX93 195 aa11.18□□□□□ -0.62
RPE-201ENST00000354506 MYH7P12883 1935 aa11.18□□□□□ -0.62
RPE-201ENST00000354506 ABCC12Q96J65 1359 aa11.18□□□□□ -0.62
RPE-201ENST00000354506 CSF1RP07333 972 aa11.18□□□□□ -0.62
RPE-201ENST00000354506 MARCKSP29966 332 aaPredicted RBP11.18□□□□□ -0.62
RPE-201ENST00000354506 ANTXR2P58335 489 aa11.18□□□□□ -0.62
RPE-201ENST00000354506 TRIM28Q13263 835 aaKnown RBP11.18□□□□□ -0.62
RPE-201ENST00000354506 SF3A1Q15459 793 aaKnown RBP11.18□□□□□ -0.62
RPE-201ENST00000354506 ANO10Q9NW15 660 aa11.18□□□□□ -0.62
RPE-201ENST00000354506 FGAP02671 866 aa11.17□□□□□ -0.62
RPE-201ENST00000354506 LMOD1P29536 600 aaPredicted RBP11.17□□□□□ -0.62
RPE-201ENST00000354506 FKBP4Q02790 459 aaKnown RBP eCLIP11.17□□□□□ -0.62
RPE-201ENST00000354506 PTPN14Q15678 1187 aa11.17□□□□□ -0.62
RPE-201ENST00000354506 FBXO18Q8NFZ0 1043 aa11.17□□□□□ -0.62
RPE-201ENST00000354506 OSBPL5Q9H0X9 879 aaPredicted RBP11.17□□□□□ -0.62
RPE-201ENST00000354506 CLIC4Q9Y696 253 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms