RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 COL4A1P02462 1669 aa12.52□□□□□ -0.4
PTPN2-203ENST00000353319 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.52□□□□□ -0.4
PTPN2-203ENST00000353319 SNAP23O00161 211 aa12.52□□□□□ -0.4
PTPN2-203ENST00000353319 PDE6AP16499 860 aa12.52□□□□□ -0.4
PTPN2-203ENST00000353319 BCAMP50895 628 aa12.52□□□□□ -0.4
PTPN2-203ENST00000353319 EXOSC10Q01780 885 aaKnown RBP12.52□□□□□ -0.4
PTPN2-203ENST00000353319 MAP3K12Q12852 859 aa12.52□□□□□ -0.4
PTPN2-203ENST00000353319 NFIXQ14938 502 aa12.52□□□□□ -0.4
PTPN2-203ENST00000353319 STOX1Q6ZVD7 989 aa12.52□□□□□ -0.4
PTPN2-203ENST00000353319 CELF1Q92879 486 aaKnown RBP12.52□□□□□ -0.4
PTPN2-203ENST00000353319 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.4
PTPN2-203ENST00000353319 ANKRD2Q9GZV1 360 aa12.52□□□□□ -0.4
PTPN2-203ENST00000353319 TPCN1Q9ULQ1 816 aa12.52□□□□□ -0.4
PTPN2-203ENST00000353319 WDR33Q9C0J8 1336 aaKnown RBP12.52□□□□□ -0.41
PTPN2-203ENST00000353319 DOCK2Q92608 1830 aa12.52□□□□□ -0.41
PTPN2-203ENST00000353319 E7EWF7 191 aa12.52□□□□□ -0.41
PTPN2-203ENST00000353319 PLSCR1O15162 318 aa12.52□□□□□ -0.41
PTPN2-203ENST00000353319 GPAA1O43292 621 aa12.52□□□□□ -0.41
PTPN2-203ENST00000353319 TRIM37O94972 964 aa12.52□□□□□ -0.41
PTPN2-203ENST00000353319 LARGE1O95461 756 aa12.52□□□□□ -0.41
PTPN2-203ENST00000353319 FGAP02671 866 aa12.52□□□□□ -0.41
PTPN2-203ENST00000353319 COL9A3Q14050 684 aaPredicted RBP12.52□□□□□ -0.41
PTPN2-203ENST00000353319 ALX1Q15699 326 aa12.52□□□□□ -0.41
PTPN2-203ENST00000353319 GNL3LQ9NVN8 582 aaKnown RBP12.52□□□□□ -0.41
PTPN2-203ENST00000353319 SMC3Q9UQE7 1217 aa12.52□□□□□ -0.41
PTPN2-203ENST00000353319 A0A1B0GUL6 1792 aa12.52□□□□□ -0.41
PTPN2-203ENST00000353319 ZNF532Q9HCE3 1301 aa12.51□□□□□ -0.41
PTPN2-203ENST00000353319 SEMA3EO15041 775 aa12.51□□□□□ -0.41
PTPN2-203ENST00000353319 IDH1O75874 414 aaKnown RBP12.51□□□□□ -0.41
PTPN2-203ENST00000353319 GYS1P13807 737 aa12.51□□□□□ -0.41
PTPN2-203ENST00000353319 ST3GAL1Q11201 340 aa12.51□□□□□ -0.41
PTPN2-203ENST00000353319 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
PTPN2-203ENST00000353319 PROM2Q8N271 834 aa12.51□□□□□ -0.41
PTPN2-203ENST00000353319 LARP6Q9BRS8 491 aaKnown RBP12.51□□□□□ -0.41
PTPN2-203ENST00000353319 ZMYM6O95789 1325 aa12.5□□□□□ -0.41
PTPN2-203ENST00000353319 PDS5AQ29RF7 1337 aaKnown RBP12.5□□□□□ -0.41
PTPN2-203ENST00000353319 PHF14O94880 888 aa12.5□□□□□ -0.41
PTPN2-203ENST00000353319 CAVIN4Q5BKX8 364 aa12.5□□□□□ -0.41
PTPN2-203ENST00000353319 FBXO33Q7Z6M2 555 aa12.5□□□□□ -0.41
PTPN2-203ENST00000353319 CCDC83Q8IWF9 413 aa12.5□□□□□ -0.41
PTPN2-203ENST00000353319 STRBPQ96SI9 672 aaKnown RBP12.5□□□□□ -0.41
PTPN2-203ENST00000353319 PATL2C9JE40 543 aaKnown RBP12.49□□□□□ -0.41
PTPN2-203ENST00000353319 IGSF3O75054 1194 aa12.49□□□□□ -0.41
PTPN2-203ENST00000353319 EVCP57679 992 aa12.49□□□□□ -0.41
PTPN2-203ENST00000353319 TXNRD1Q16881 649 aa12.49□□□□□ -0.41
PTPN2-203ENST00000353319 TTLL5Q6EMB2 1281 aa12.49□□□□□ -0.41
PTPN2-203ENST00000353319 TMED8Q6PL24 325 aaPredicted RBP12.49□□□□□ -0.41
PTPN2-203ENST00000353319 Q6ZUG5 572 aa12.49□□□□□ -0.41
PTPN2-203ENST00000353319 CNBD1Q8NA66 436 aa12.49□□□□□ -0.41
PTPN2-203ENST00000353319 CHMP4CQ96CF2 233 aa12.49□□□□□ -0.41
PTPN2-203ENST00000353319 FAM84BQ96KN1 310 aaPredicted RBP12.49□□□□□ -0.41
PTPN2-203ENST00000353319 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
PTPN2-203ENST00000353319 DENND2AQ9ULE3 1009 aa12.49□□□□□ -0.41
PTPN2-203ENST00000353319 TAF1P21675 1872 aa12.49□□□□□ -0.41
PTPN2-203ENST00000353319 MYO5AQ9Y4I1 1855 aaKnown RBP12.49□□□□□ -0.41
PTPN2-203ENST00000353319 WDR19Q8NEZ3 1342 aa12.49□□□□□ -0.41
PTPN2-203ENST00000353319 ZNF213O14771 459 aa12.48□□□□□ -0.41
PTPN2-203ENST00000353319 STX6O43752 255 aa12.48□□□□□ -0.41
PTPN2-203ENST00000353319 GNAT2P19087 354 aa12.48□□□□□ -0.41
PTPN2-203ENST00000353319 SYT1P21579 422 aa12.48□□□□□ -0.41
PTPN2-203ENST00000353319 GJB2P29033 226 aa12.48□□□□□ -0.41
PTPN2-203ENST00000353319 GRAPQ13588 217 aa12.48□□□□□ -0.41
PTPN2-203ENST00000353319 CRY2Q49AN0 593 aa12.48□□□□□ -0.41
PTPN2-203ENST00000353319 PRR5LQ6MZQ0 368 aa12.48□□□□□ -0.41
PTPN2-203ENST00000353319 GRAPLQ8TC17 118 aaPredicted RBP12.48□□□□□ -0.41
PTPN2-203ENST00000353319 TCEANC2Q96MN5 208 aa12.48□□□□□ -0.41
PTPN2-203ENST00000353319 LMBRD1Q9NUN5 540 aa12.48□□□□□ -0.41
PTPN2-203ENST00000353319 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
PTPN2-203ENST00000353319 PNPLA7Q6ZV29 1317 aa12.48□□□□□ -0.41
PTPN2-203ENST00000353319 ZSCAN22P10073 491 aaPredicted RBP12.47□□□□□ -0.41
PTPN2-203ENST00000353319 MCTP1Q6DN14 999 aa12.47□□□□□ -0.41
PTPN2-203ENST00000353319 MAGEB6Q8N7X4 407 aa12.47□□□□□ -0.41
PTPN2-203ENST00000353319 NECAB1Q8N987 351 aa12.47□□□□□ -0.41
PTPN2-203ENST00000353319 AIDAQ96BJ3 306 aa12.47□□□□□ -0.41
PTPN2-203ENST00000353319 ZNF274Q96GC6 653 aaPredicted RBP12.47□□□□□ -0.41
PTPN2-203ENST00000353319 LLPHQ9BRT6 129 aaKnown RBP12.47□□□□□ -0.41
PTPN2-203ENST00000353319 IRS2Q9Y4H2 1338 aa12.47□□□□□ -0.41
PTPN2-203ENST00000353319 A0A0G2JLW4 131 aa12.47□□□□□ -0.41
PTPN2-203ENST00000353319 PFKFB2O60825 505 aa12.47□□□□□ -0.41
PTPN2-203ENST00000353319 SERPINB2P05120 415 aa12.47□□□□□ -0.41
PTPN2-203ENST00000353319 PDCP20941 246 aa12.47□□□□□ -0.41
PTPN2-203ENST00000353319 GYG1P46976 350 aa12.47□□□□□ -0.41
PTPN2-203ENST00000353319 KLHL40Q2TBA0 621 aa12.47□□□□□ -0.41
PTPN2-203ENST00000353319 C15orf52Q6ZUT6 534 aaKnown RBP12.47□□□□□ -0.41
PTPN2-203ENST00000353319 GTF3C6Q969F1 213 aa12.47□□□□□ -0.41
PTPN2-203ENST00000353319 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
PTPN2-203ENST00000353319 LEMD3Q9Y2U8 911 aa12.47□□□□□ -0.41
PTPN2-203ENST00000353319 TNRC6CQ9HCJ0 1690 aaKnown RBP12.46□□□□□ -0.41
PTPN2-203ENST00000353319 KLRG2A4D1S0 409 aaPredicted RBP12.46□□□□□ -0.42
PTPN2-203ENST00000353319 NPHP1O15259 732 aa12.46□□□□□ -0.42
PTPN2-203ENST00000353319 HIBADHP31937 336 aaKnown RBP12.46□□□□□ -0.42
PTPN2-203ENST00000353319 MB21D2Q8IYB1 491 aaPredicted RBP12.46□□□□□ -0.42
PTPN2-203ENST00000353319 CCDC24Q8N4L8 307 aa12.46□□□□□ -0.42
PTPN2-203ENST00000353319 NCOA7Q8NI08 942 aa12.46□□□□□ -0.42
PTPN2-203ENST00000353319 BRF1Q92994 677 aa12.46□□□□□ -0.42
PTPN2-203ENST00000353319 LRP2BPQ9P2M1 347 aa12.46□□□□□ -0.42
PTPN2-203ENST00000353319 ATP6V1DQ9Y5K8 247 aa12.46□□□□□ -0.42
PTPN2-203ENST00000353319 WTIPA6NIX2 430 aaPredicted RBP12.45□□□□□ -0.42
PTPN2-203ENST00000353319 HOXA10P31260 410 aaPredicted RBP12.45□□□□□ -0.42
PTPN2-203ENST00000353319 MCM5P33992 734 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms