RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 DPF2Q92785 391 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 BAG1Q99933 345 aaPredicted RBP8.79□□□□□ -1
BRCA1-201ENST00000352993 YY1AP1Q9H869 796 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 KCND1Q9NSA2 647 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 HDAC5Q9UQL6 1122 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 MAP3K19Q56UN5 1328 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 MAP3K5Q99683 1374 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 TXLNAP40222 546 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 CHMP4BP1P59074 171 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 MTX1Q13505 466 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 SLC52A1Q9NWF4 448 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 RNF216Q9NWF9 866 aaPredicted RBP8.79□□□□□ -1
BRCA1-201ENST00000352993 NDUFB9Q9Y6M9 179 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 TMEM232C9JQI7 657 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 WDHD1O75717 1129 aaPredicted RBP8.79□□□□□ -1
BRCA1-201ENST00000352993 GUCY2CP25092 1073 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 ADKP55263 362 aaKnown RBP8.79□□□□□ -1
BRCA1-201ENST00000352993 NLRP12P59046 1061 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 KIF4BQ2VIQ3 1234 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 EDC4Q6P2E9 1401 aaKnown RBP8.79□□□□□ -1
BRCA1-201ENST00000352993 SUGCTQ9HAC7 445 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 HMG20BQ9P0W2 317 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 CRB1P82279 1406 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 GNAT3A8MTJ3 354 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 CEBPAP49715 358 aaPredicted RBP8.78□□□□□ -1
BRCA1-201ENST00000352993 MNAT1P51948 309 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 CPLX3Q8WVH0 158 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 NCAPGQ9BPX3 1015 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 CCDC151A5D8V7 595 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 VWA3AA6NCI4 1184 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 ARHGAP6O43182 974 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 ZNF202O95125 648 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 MARCKSP29966 332 aaPredicted RBP8.78□□□□□ -1
BRCA1-201ENST00000352993 PSME1Q06323 249 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 RAB11FIP4Q86YS3 637 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 FMR1NBQ8N0W7 255 aaPredicted RBP8.78□□□□□ -1
BRCA1-201ENST00000352993 ENGASEQ8NFI3 743 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 IRX2Q9BZI1 471 aaPredicted RBP8.78□□□□□ -1
BRCA1-201ENST00000352993 BICC1Q9H694 974 aaKnown RBP8.78□□□□□ -1
BRCA1-201ENST00000352993 BRMS1Q9HCU9 246 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 CHPF2Q9P2E5 772 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 AATKQ6ZMQ8 1374 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 BRD3Q15059 726 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 FBXO31Q5XUX0 539 aaPredicted RBP8.78□□□□□ -1
BRCA1-201ENST00000352993 CNNM3Q8NE01 707 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 KCNB2Q92953 911 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 ACBD3Q9H3P7 528 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 RABEP2Q9H5N1 569 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 TLR7Q9NYK1 1049 aaKnown RBP8.78□□□□□ -1
BRCA1-201ENST00000352993 ADCY9O60503 1353 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 NALCNQ8IZF0 1738 aa8.78□□□□□ -1
BRCA1-201ENST00000352993 FANCGO15287 622 aa8.77□□□□□ -1
BRCA1-201ENST00000352993 MAP3K9P80192 1104 aa8.77□□□□□ -1
BRCA1-201ENST00000352993 EAF2Q96CJ1 260 aaPredicted RBP8.77□□□□□ -1
BRCA1-201ENST00000352993 MRFAP1Q9Y605 127 aa8.77□□□□□ -1
BRCA1-201ENST00000352993 GOLGA6L9A6NEM1 432 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 SPTLC2O15270 562 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 ADD1P35611 737 aaKnown RBP8.77□□□□□ -1.01
BRCA1-201ENST00000352993 ADALQ6DHV7 355 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 NAA16Q6N069 864 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-201ENST00000352993 STK11IPQ8N1F8 1099 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 NSUN7Q8NE18 718 aaKnown RBP8.77□□□□□ -1.01
BRCA1-201ENST00000352993 ABCB6Q9NP58 842 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 ATG3Q9NT62 314 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 PSD3Q9NYI0 1048 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 CLIC4Q9Y696 253 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 KCNJ6P48051 423 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 MYL5Q02045 173 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 TOGARAM2Q6ZUX3 1019 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 ILDR2Q71H61 639 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 FANCLQ9NW38 375 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 PLEKHG2Q9H7P9 1386 aa8.77□□□□□ -1.01
BRCA1-201ENST00000352993 ATP2B1P20020 1258 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 AKAP17AQ02040 695 aaKnown RBP8.76□□□□□ -1.01
BRCA1-201ENST00000352993 AIMP1Q12904 312 aaKnown RBP8.76□□□□□ -1.01
BRCA1-201ENST00000352993 CCDC91Q7Z6B0 441 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 KLHDC4Q8TBB5 520 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 UBXN6Q9BZV1 441 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 MKRN1Q9UHC7 482 aaKnown RBP8.76□□□□□ -1.01
BRCA1-201ENST00000352993 KIF5CO60282 957 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 TAF5LO75529 589 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 CWF19L2Q2TBE0 894 aaKnown RBP8.76□□□□□ -1.01
BRCA1-201ENST00000352993 ZNF569Q5MCW4 686 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 C8orf76Q96K31 380 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 FAM204AQ9H8W3 233 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 CPLX1O14810 134 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 CHGBP05060 677 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 SYKP43405 635 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 LIG3P49916 1009 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 SIRT1Q96EB6 747 aa8.76□□□□□ -1.01
BRCA1-201ENST00000352993 NEXMIFQ5QGS0 1516 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 ARHGEF10O15013 1369 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 IBSPP21815 317 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-201ENST00000352993 DNAJC21Q5F1R6 531 aaKnown RBP8.75□□□□□ -1.01
BRCA1-201ENST00000352993 AXDND1Q5T1B0 1012 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-201ENST00000352993 RSRC2Q7L4I2 434 aaKnown RBP8.75□□□□□ -1.01
BRCA1-201ENST00000352993 KCNG4Q8TDN1 519 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 SMARCC1Q92922 1105 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-201ENST00000352993 GDAP1L1Q96MZ0 367 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 EYA1Q99502 592 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms