RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 POTECB2RU33 542 aa17.13■□□□□ 0.33
SEC13-202ENST00000350697 SCNN1DP51172 638 aa17.13■□□□□ 0.33
SEC13-202ENST00000350697 AACSQ86V21 672 aa17.13■□□□□ 0.33
SEC13-202ENST00000350697 GPRC5DQ9NZD1 345 aa17.13■□□□□ 0.33
SEC13-202ENST00000350697 HACL1Q9UJ83 578 aa17.13■□□□□ 0.33
SEC13-202ENST00000350697 MYH13Q9UKX3 1938 aa17.13■□□□□ 0.33
SEC13-202ENST00000350697 SEMA3EO15041 775 aa17.13■□□□□ 0.33
SEC13-202ENST00000350697 ZBTB22O15209 634 aa17.13■□□□□ 0.33
SEC13-202ENST00000350697 FKBP1AP62942 108 aaKnown RBP17.13■□□□□ 0.33
SEC13-202ENST00000350697 DBNDD2Q9BQY9 259 aa17.13■□□□□ 0.33
SEC13-202ENST00000350697 CCDC8Q9H0W5 538 aaPredicted RBP17.13■□□□□ 0.33
SEC13-202ENST00000350697 CCDC158Q5M9N0 1113 aa17.12■□□□□ 0.33
SEC13-202ENST00000350697 GCC1Q96CN9 775 aa17.12■□□□□ 0.33
SEC13-202ENST00000350697 GMLQ99445 158 aa17.12■□□□□ 0.33
SEC13-202ENST00000350697 CNOT7Q9UIV1 285 aaKnown RBP17.12■□□□□ 0.33
SEC13-202ENST00000350697 DBNLQ9UJU6 430 aaKnown RBP17.12■□□□□ 0.33
SEC13-202ENST00000350697 JAG2Q9Y219 1238 aa17.12■□□□□ 0.33
SEC13-202ENST00000350697 NEFLP07196 543 aa17.11■□□□□ 0.33
SEC13-202ENST00000350697 IFIT2P09913 472 aaKnown RBP17.11■□□□□ 0.33
SEC13-202ENST00000350697 CHAF1AQ13111 956 aaPredicted RBP17.11■□□□□ 0.33
SEC13-202ENST00000350697 MICALL2Q8IY33 904 aa17.11■□□□□ 0.33
SEC13-202ENST00000350697 TBC1D22AQ8WUA7 517 aa17.11■□□□□ 0.33
SEC13-202ENST00000350697 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
SEC13-202ENST00000350697 TLR7Q9NYK1 1049 aaKnown RBP17.11■□□□□ 0.33
SEC13-202ENST00000350697 DENND2AQ9ULE3 1009 aa17.11■□□□□ 0.33
SEC13-202ENST00000350697 H7C1D1 291 aa17.1■□□□□ 0.33
SEC13-202ENST00000350697 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
SEC13-202ENST00000350697 UQCRFS1P1P0C7P4 283 aa17.1■□□□□ 0.33
SEC13-202ENST00000350697 ARID4AP29374 1257 aaPredicted RBP17.1■□□□□ 0.33
SEC13-202ENST00000350697 EPHX2P34913 555 aa17.1■□□□□ 0.33
SEC13-202ENST00000350697 EPS15P42566 896 aa17.1■□□□□ 0.33
SEC13-202ENST00000350697 MFSD14BQ5SR56 506 aa17.1■□□□□ 0.33
SEC13-202ENST00000350697 CERS5Q8N5B7 392 aa17.1■□□□□ 0.33
SEC13-202ENST00000350697 TAF1DQ9H5J8 278 aaPredicted RBP17.1■□□□□ 0.33
SEC13-202ENST00000350697 PDS5AQ29RF7 1337 aaKnown RBP17.09■□□□□ 0.33
SEC13-202ENST00000350697 KIF3CO14782 793 aa17.09■□□□□ 0.33
SEC13-202ENST00000350697 IGHDP01880 384 aa17.09■□□□□ 0.33
SEC13-202ENST00000350697 USP17L8P0C7I0 530 aa17.09■□□□□ 0.33
SEC13-202ENST00000350697 MMP14P50281 582 aa17.09■□□□□ 0.33
SEC13-202ENST00000350697 RASGRF1Q13972 1273 aa17.09■□□□□ 0.33
SEC13-202ENST00000350697 TTC39AQ5SRH9 613 aa17.09■□□□□ 0.33
SEC13-202ENST00000350697 WDR66Q8TBY9 1149 aa17.09■□□□□ 0.33
SEC13-202ENST00000350697 ZNF512BQ96KM6 892 aaPredicted RBP17.09■□□□□ 0.33
SEC13-202ENST00000350697 BCL11AQ9H165 835 aa17.09■□□□□ 0.33
SEC13-202ENST00000350697 COL1A1P02452 1464 aaPredicted RBP17.08■□□□□ 0.33
SEC13-202ENST00000350697 ZNF280AP59817 542 aaPredicted RBP17.08■□□□□ 0.32
SEC13-202ENST00000350697 PNMA8AQ86V59 439 aaPredicted RBP17.08■□□□□ 0.32
SEC13-202ENST00000350697 KIAA0825Q8IV33 1275 aa17.08■□□□□ 0.32
SEC13-202ENST00000350697 SMC5Q8IY18 1101 aa17.08■□□□□ 0.32
SEC13-202ENST00000350697 OGFOD1Q8N543 542 aa17.08■□□□□ 0.32
SEC13-202ENST00000350697 ADARB2Q9NS39 739 aaKnown RBP17.08■□□□□ 0.32
SEC13-202ENST00000350697 SHTN1A0MZ66 631 aa17.07■□□□□ 0.32
SEC13-202ENST00000350697 C16orf71Q8IYS4 520 aaPredicted RBP17.07■□□□□ 0.32
SEC13-202ENST00000350697 HMG20BQ9P0W2 317 aa17.07■□□□□ 0.32
SEC13-202ENST00000350697 ZBTB47Q9UFB7 747 aaPredicted RBP17.07■□□□□ 0.32
SEC13-202ENST00000350697 HDAC9Q9UKV0 1011 aa17.07■□□□□ 0.32
SEC13-202ENST00000350697 SALL1Q9NSC2 1324 aa17.06■□□□□ 0.32
SEC13-202ENST00000350697 MCAMP43121 646 aa17.06■□□□□ 0.32
SEC13-202ENST00000350697 USP50Q70EL3 339 aaPredicted RBP17.06■□□□□ 0.32
SEC13-202ENST00000350697 SPATA5Q8NB90 893 aa17.06■□□□□ 0.32
SEC13-202ENST00000350697 SUGT1Q9Y2Z0 365 aa17.06■□□□□ 0.32
SEC13-202ENST00000350697 SCARF1Q14162 830 aa17.05■□□□□ 0.32
SEC13-202ENST00000350697 EAPPQ56P03 285 aaPredicted RBP17.05■□□□□ 0.32
SEC13-202ENST00000350697 ANKRD45Q5TZF3 282 aa17.05■□□□□ 0.32
SEC13-202ENST00000350697 SAMD7Q7Z3H4 446 aa17.05■□□□□ 0.32
SEC13-202ENST00000350697 ZGPATQ8N5A5 531 aaKnown RBP17.05■□□□□ 0.32
SEC13-202ENST00000350697 F8W031 263 aaPredicted RBP17.04■□□□□ 0.32
SEC13-202ENST00000350697 TBC1D10BQ4KMP7 808 aaPredicted RBP17.04■□□□□ 0.32
SEC13-202ENST00000350697 PI16Q6UXB8 463 aa17.04■□□□□ 0.32
SEC13-202ENST00000350697 TRPM4Q8TD43 1214 aa17.04■□□□□ 0.32
SEC13-202ENST00000350697 MYOZ2Q9NPC6 264 aa17.04■□□□□ 0.32
SEC13-202ENST00000350697 TTF2Q9UNY4 1162 aaKnown RBP17.04■□□□□ 0.32
SEC13-202ENST00000350697 AKAP11Q9UKA4 1901 aa17.04■□□□□ 0.32
SEC13-202ENST00000350697 TOMM70O94826 608 aa17.04■□□□□ 0.32
SEC13-202ENST00000350697 KIF4BQ2VIQ3 1234 aa17.04■□□□□ 0.32
SEC13-202ENST00000350697 MAST3O60307 1309 aa17.03■□□□□ 0.32
SEC13-202ENST00000350697 C1QTNF8P60827 252 aa17.03■□□□□ 0.32
SEC13-202ENST00000350697 GRIK5Q16478 980 aa17.03■□□□□ 0.32
SEC13-202ENST00000350697 RBM26Q5T8P6 1007 aaKnown RBP17.03■□□□□ 0.32
SEC13-202ENST00000350697 SPTY2D1Q68D10 685 aaPredicted RBP17.03■□□□□ 0.32
SEC13-202ENST00000350697 LDHDQ86WU2 507 aa17.03■□□□□ 0.32
SEC13-202ENST00000350697 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.03■□□□□ 0.32
SEC13-202ENST00000350697 SNRKQ9NRH2 765 aa17.03■□□□□ 0.32
SEC13-202ENST00000350697 EGFRP00533 1210 aa17.02■□□□□ 0.31
SEC13-202ENST00000350697 LDHBP07195 334 aaKnown RBP17.02■□□□□ 0.31
SEC13-202ENST00000350697 POTEIP0CG38 1075 aa17.02■□□□□ 0.31
SEC13-202ENST00000350697 POTEJP0CG39 1038 aa17.02■□□□□ 0.31
SEC13-202ENST00000350697 ATP5JP18859 108 aa17.02■□□□□ 0.31
SEC13-202ENST00000350697 PRDX5P30044 214 aa17.02■□□□□ 0.31
SEC13-202ENST00000350697 HIRAP54198 1017 aaPredicted RBP17.02■□□□□ 0.31
SEC13-202ENST00000350697 HDLBPQ00341 1268 aaKnown RBP17.02■□□□□ 0.31
SEC13-202ENST00000350697 B4GALNT3Q6L9W6 998 aa17.02■□□□□ 0.31
SEC13-202ENST00000350697 RBM46Q8TBY0 533 aaKnown RBP17.02■□□□□ 0.31
SEC13-202ENST00000350697 GPATCH3Q96I76 525 aa17.02■□□□□ 0.31
SEC13-202ENST00000350697 ABCF2Q9UG63 623 aa17.02■□□□□ 0.31
SEC13-202ENST00000350697 SERPINA10Q9UK55 444 aa17.02■□□□□ 0.31
SEC13-202ENST00000350697 ADAMTSL1Q8N6G6 1762 aa17.01■□□□□ 0.31
SEC13-202ENST00000350697 ZAP70P43403 619 aa17.01■□□□□ 0.31
SEC13-202ENST00000350697 NUCB1Q02818 461 aa17.01■□□□□ 0.31
SEC13-202ENST00000350697 MTMR14Q8NCE2 650 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms