RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 HSP90AB4PQ58FF6 505 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 ATRIPQ8WXE1 791 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 EYA1Q99502 592 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 FMN2Q9NZ56 1722 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 ATP2B1P20020 1258 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 MTX1Q13505 466 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 CLIC4Q9Y696 253 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 SALL1Q9NSC2 1324 aa16.48■□□□□ 0.23
RLIM-202ENST00000349225 CYP21A2P08686 494 aa16.48■□□□□ 0.23
RLIM-202ENST00000349225 NLRP12P59046 1061 aa16.48■□□□□ 0.23
RLIM-202ENST00000349225 E2F4Q16254 413 aa16.48■□□□□ 0.23
RLIM-202ENST00000349225 CCDC129Q6ZRS4 1044 aa16.48■□□□□ 0.23
RLIM-202ENST00000349225 ERC1Q8IUD2 1116 aa16.48■□□□□ 0.23
RLIM-202ENST00000349225 BRMS1Q9HCU9 246 aa16.48■□□□□ 0.23
RLIM-202ENST00000349225 ALDH1L1O75891 902 aa16.48■□□□□ 0.23
RLIM-202ENST00000349225 RAPGEF3O95398 923 aa16.48■□□□□ 0.23
RLIM-202ENST00000349225 ADALQ6DHV7 355 aa16.48■□□□□ 0.23
RLIM-202ENST00000349225 FSD1Q9BTV5 496 aa16.48■□□□□ 0.23
RLIM-202ENST00000349225 CORO7P57737 925 aa16.47■□□□□ 0.23
RLIM-202ENST00000349225 CCT2P78371 535 aaKnown RBP16.47■□□□□ 0.23
RLIM-202ENST00000349225 NDUFB9Q9Y6M9 179 aa16.47■□□□□ 0.23
RLIM-202ENST00000349225 CCP110O43303 1012 aa16.47■□□□□ 0.23
RLIM-202ENST00000349225 PFKFB2O60825 505 aa16.47■□□□□ 0.23
RLIM-202ENST00000349225 EIF2S2P20042 333 aaKnown RBP16.47■□□□□ 0.23
RLIM-202ENST00000349225 LEKR1Q6ZMV7 388 aa16.47■□□□□ 0.23
RLIM-202ENST00000349225 VSTM4Q8IW00 320 aa16.47■□□□□ 0.23
RLIM-202ENST00000349225 HMG20BQ9P0W2 317 aa16.47■□□□□ 0.23
RLIM-202ENST00000349225 CHPF2Q9P2E5 772 aa16.47■□□□□ 0.23
RLIM-202ENST00000349225 UBASH3AP57075 661 aa16.47■□□□□ 0.23
RLIM-202ENST00000349225 LINC00301Q8NCQ3 95 aa16.47■□□□□ 0.23
RLIM-202ENST00000349225 DNAAF4Q8WXU2 420 aa16.47■□□□□ 0.23
RLIM-202ENST00000349225 METP08581 1390 aa16.46■□□□□ 0.23
RLIM-202ENST00000349225 A0A0G2JLW4 131 aa16.46■□□□□ 0.23
RLIM-202ENST00000349225 OTUD7BQ6GQQ9 843 aa16.46■□□□□ 0.23
RLIM-202ENST00000349225 GOLGA1Q92805 767 aa16.46■□□□□ 0.23
RLIM-202ENST00000349225 IVLP07476 585 aa16.46■□□□□ 0.23
RLIM-202ENST00000349225 DESI2Q9BSY9 194 aa16.46■□□□□ 0.23
RLIM-202ENST00000349225 MYCBPQ99417 103 aaPredicted RBP16.46■□□□□ 0.22
RLIM-202ENST00000349225 MRPL44Q9H9J2 332 aaKnown RBP16.46■□□□□ 0.22
RLIM-202ENST00000349225 L1RE1Q9UN81 338 aa16.46■□□□□ 0.22
RLIM-202ENST00000349225 FDPSP14324 419 aaKnown RBP16.45■□□□□ 0.22
RLIM-202ENST00000349225 GPATCH3Q96I76 525 aa16.45■□□□□ 0.22
RLIM-202ENST00000349225 MROH7-TTC4A0A0A0MT08 1334 aa16.45■□□□□ 0.22
RLIM-202ENST00000349225 ZNF202O95125 648 aa16.45■□□□□ 0.22
RLIM-202ENST00000349225 SLC3A2P08195 630 aaKnown RBP16.45■□□□□ 0.22
RLIM-202ENST00000349225 MTF1Q14872 753 aa16.45■□□□□ 0.22
RLIM-202ENST00000349225 FCHSD1Q86WN1 690 aa16.45■□□□□ 0.22
RLIM-202ENST00000349225 KAZALD1Q96I82 304 aa16.45■□□□□ 0.22
RLIM-202ENST00000349225 ABCB6Q9NP58 842 aa16.45■□□□□ 0.22
RLIM-202ENST00000349225 RTEL1Q9NZ71 1219 aa16.45■□□□□ 0.22
RLIM-202ENST00000349225 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
RLIM-202ENST00000349225 A0A1W2PQ27 194 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 A0A1W2PQ64 194 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 A0A1W2PQD8 194 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 GNAT3A8MTJ3 354 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 HIP1O00291 1037 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 NRDCO43847 1150 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 KARSQ15046 597 aaKnown RBP16.44■□□□□ 0.22
RLIM-202ENST00000349225 BRD3Q15059 726 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 GOLGA6L1Q8N7Z2 621 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 ZNF396Q96N95 335 aaPredicted RBP16.44■□□□□ 0.22
RLIM-202ENST00000349225 IKBKBO14920 756 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 ARHGAP6O43182 974 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 PHACTR2O75167 634 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 CFAP100Q494V2 611 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 HNRNPLLQ8WVV9 542 aaKnown RBP16.44■□□□□ 0.22
RLIM-202ENST00000349225 LLPHQ9BRT6 129 aaKnown RBP16.44■□□□□ 0.22
RLIM-202ENST00000349225 PUF60Q9UHX1 559 aaKnown RBP16.44■□□□□ 0.22
RLIM-202ENST00000349225 ZSCAN12O43309 604 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 USP5P45974 858 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 TBX2Q13207 712 aaPredicted RBP16.44■□□□□ 0.22
RLIM-202ENST00000349225 HSP90AA4PQ58FG1 418 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 GPATCH11Q8N954 259 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 TC2NQ8N9U0 490 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 BICC1Q9H694 974 aaKnown RBP16.44■□□□□ 0.22
RLIM-202ENST00000349225 GJB4Q9NTQ9 266 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 RAB21Q9UL25 225 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 USP31Q70CQ4 1352 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 NRXN3Q9Y4C0 1643 aa16.44■□□□□ 0.22
RLIM-202ENST00000349225 CUTAO60888 179 aa16.43■□□□□ 0.22
RLIM-202ENST00000349225 ADKP55263 362 aaKnown RBP16.43■□□□□ 0.22
RLIM-202ENST00000349225 CT47A1Q5JQC4 288 aaPredicted RBP16.43■□□□□ 0.22
RLIM-202ENST00000349225 ZNF609O15014 1411 aa16.43■□□□□ 0.22
RLIM-202ENST00000349225 KLHDC4Q8TBB5 520 aa16.43■□□□□ 0.22
RLIM-202ENST00000349225 SERPINC1P01008 464 aa16.43■□□□□ 0.22
RLIM-202ENST00000349225 POLR3DP05423 398 aaPredicted RBP16.42■□□□□ 0.22
RLIM-202ENST00000349225 CHMP4BP1P59074 171 aa16.42■□□□□ 0.22
RLIM-202ENST00000349225 PLEKHO1Q53GL0 409 aaPredicted RBP16.42■□□□□ 0.22
RLIM-202ENST00000349225 AXDND1Q5T1B0 1012 aaPredicted RBP16.42■□□□□ 0.22
RLIM-202ENST00000349225 BAG1Q99933 345 aaPredicted RBP16.42■□□□□ 0.22
RLIM-202ENST00000349225 FANCLQ9NW38 375 aa16.42■□□□□ 0.22
RLIM-202ENST00000349225 TOP1P11387 765 aaKnown RBP16.42■□□□□ 0.22
RLIM-202ENST00000349225 NOM1Q5C9Z4 860 aaKnown RBP16.42■□□□□ 0.22
RLIM-202ENST00000349225 ATL3Q6DD88 541 aa16.42■□□□□ 0.22
RLIM-202ENST00000349225 EP400NLQ6ZTU2 488 aa16.42■□□□□ 0.22
RLIM-202ENST00000349225 CNNM3Q8NE01 707 aa16.42■□□□□ 0.22
RLIM-202ENST00000349225 KAT2BQ92831 832 aa16.42■□□□□ 0.22
RLIM-202ENST00000349225 RNF216Q9NWF9 866 aaPredicted RBP16.42■□□□□ 0.22
RLIM-202ENST00000349225 ACEP12821 1306 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms