RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 COL11A2P13942 1736 aaPredicted RBP22.36■■□□□ 1.17
PTN-201ENST00000348225 WTIPA6NIX2 430 aaPredicted RBP22.35■■□□□ 1.17
PTN-201ENST00000348225 PPEF1O14829 653 aaPredicted RBP22.35■■□□□ 1.17
PTN-201ENST00000348225 SLC27A2O14975 620 aa22.35■■□□□ 1.17
PTN-201ENST00000348225 PDE6AP16499 860 aa22.35■■□□□ 1.17
PTN-201ENST00000348225 ATP2B4P23634 1241 aa22.35■■□□□ 1.17
PTN-201ENST00000348225 RASEFQ8IZ41 740 aa22.35■■□□□ 1.17
PTN-201ENST00000348225 FRAT2O75474 233 aaPredicted RBP22.35■■□□□ 1.17
PTN-201ENST00000348225 ALDH1B1P30837 517 aa22.35■■□□□ 1.17
PTN-201ENST00000348225 MASTLQ96GX5 879 aa22.35■■□□□ 1.17
PTN-201ENST00000348225 TM6SF1Q9BZW5 370 aa22.35■■□□□ 1.17
PTN-201ENST00000348225 KLRK1P26718 216 aa22.34■■□□□ 1.17
PTN-201ENST00000348225 GPSM2P81274 684 aa22.34■■□□□ 1.17
PTN-201ENST00000348225 C15orf52Q6ZUT6 534 aaKnown RBP22.34■■□□□ 1.17
PTN-201ENST00000348225 GGA1Q9UJY5 639 aa22.34■■□□□ 1.17
PTN-201ENST00000348225 IQSEC3Q9UPP2 1182 aaPredicted RBP22.34■■□□□ 1.17
PTN-201ENST00000348225 ZNF532Q9HCE3 1301 aa22.33■■□□□ 1.17
PTN-201ENST00000348225 IRS2Q9Y4H2 1338 aa22.33■■□□□ 1.17
PTN-201ENST00000348225 SP8Q8IXZ3 490 aa22.33■■□□□ 1.17
PTN-201ENST00000348225 PODXL2Q9NZ53 605 aa22.33■■□□□ 1.17
PTN-201ENST00000348225 LRP2BPQ9P2M1 347 aa22.33■■□□□ 1.17
PTN-201ENST00000348225 WWC3Q9ULE0 1092 aa22.33■■□□□ 1.17
PTN-201ENST00000348225 NSFL1CQ9UNZ2 370 aaKnown RBP22.33■■□□□ 1.17
PTN-201ENST00000348225 COL1A1P02452 1464 aaPredicted RBP22.33■■□□□ 1.16
PTN-201ENST00000348225 HSPD1P10809 573 aaKnown RBP22.32■■□□□ 1.16
PTN-201ENST00000348225 PSMA5P28066 241 aa22.32■■□□□ 1.16
PTN-201ENST00000348225 KRT32Q14532 448 aa22.32■■□□□ 1.16
PTN-201ENST00000348225 TCRBV5S4A2TA0A5A2 114 aa22.31■■□□□ 1.16
PTN-201ENST00000348225 GPAA1O43292 621 aa22.31■■□□□ 1.16
PTN-201ENST00000348225 UFL1O94874 794 aa22.31■■□□□ 1.16
PTN-201ENST00000348225 HSP90AA1P07900 732 aaKnown RBP22.31■■□□□ 1.16
PTN-201ENST00000348225 TSGA10IPQ3SY00 556 aa22.31■■□□□ 1.16
PTN-201ENST00000348225 ZNF804AQ7Z570 1209 aa22.31■■□□□ 1.16
PTN-201ENST00000348225 MAGEB6Q8N7X4 407 aa22.31■■□□□ 1.16
PTN-201ENST00000348225 SLC16A10Q8TF71 515 aa22.31■■□□□ 1.16
PTN-201ENST00000348225 JAKMIP1Q96N16 626 aaKnown RBP22.31■■□□□ 1.16
PTN-201ENST00000348225 UPF3BQ9BZI7 483 aaKnown RBP22.31■■□□□ 1.16
PTN-201ENST00000348225 PUS7LQ9H0K6 701 aaKnown RBP22.31■■□□□ 1.16
PTN-201ENST00000348225 TMX4Q9H1E5 349 aaPredicted RBP22.31■■□□□ 1.16
PTN-201ENST00000348225 ATP6V0A2Q9Y487 856 aa22.31■■□□□ 1.16
PTN-201ENST00000348225 CASTP20810 708 aaKnown RBP22.31■■□□□ 1.16
PTN-201ENST00000348225 VPS53Q5VIR6 699 aa22.31■■□□□ 1.16
PTN-201ENST00000348225 RPAP1Q9BWH6 1393 aaPredicted RBP22.3■■□□□ 1.16
PTN-201ENST00000348225 C2CD5Q86YS7 1000 aa22.3■■□□□ 1.16
PTN-201ENST00000348225 SLKQ9H2G2 1235 aaPredicted RBP22.3■■□□□ 1.16
PTN-201ENST00000348225 ABCF2Q9UG63 623 aa22.3■■□□□ 1.16
PTN-201ENST00000348225 CTNNA3Q9UI47 895 aa22.3■■□□□ 1.16
PTN-201ENST00000348225 CYP46A1Q9Y6A2 500 aa22.3■■□□□ 1.16
PTN-201ENST00000348225 LTBP1Q14766 1721 aa22.3■■□□□ 1.16
PTN-201ENST00000348225 H0YIN7 160 aa22.29■■□□□ 1.16
PTN-201ENST00000348225 STYK1Q6J9G0 422 aa22.29■■□□□ 1.16
PTN-201ENST00000348225 AIDAQ96BJ3 306 aa22.29■■□□□ 1.16
PTN-201ENST00000348225 ZSWIM6Q9HCJ5 1215 aa22.29■■□□□ 1.16
PTN-201ENST00000348225 TXNRD3Q86VQ6 643 aa22.28■■□□□ 1.16
PTN-201ENST00000348225 SPRYD3Q8NCJ5 442 aa22.28■■□□□ 1.16
PTN-201ENST00000348225 RAI14Q9P0K7 980 aa22.28■■□□□ 1.16
PTN-201ENST00000348225 ADCK5Q3MIX3 580 aa22.28■■□□□ 1.16
PTN-201ENST00000348225 SLC51AQ86UW1 340 aa22.28■■□□□ 1.16
PTN-201ENST00000348225 TBC1D16Q8TBP0 767 aa22.28■■□□□ 1.16
PTN-201ENST00000348225 ZNF622Q969S3 477 aaKnown RBP eCLIP22.28■■□□□ 1.16
PTN-201ENST00000348225 MAST2Q6P0Q8 1798 aa22.27■■□□□ 1.16
PTN-201ENST00000348225 IGSF3O75054 1194 aa22.27■■□□□ 1.16
PTN-201ENST00000348225 TMED8Q6PL24 325 aaPredicted RBP22.27■■□□□ 1.16
PTN-201ENST00000348225 RUFY3Q7L099 469 aa22.27■■□□□ 1.16
PTN-201ENST00000348225 ZGPATQ8N5A5 531 aaKnown RBP22.27■■□□□ 1.16
PTN-201ENST00000348225 DUOX1Q9NRD9 1551 aa22.26■■□□□ 1.15
PTN-201ENST00000348225 CYP21A2P08686 494 aa22.26■■□□□ 1.15
PTN-201ENST00000348225 BLOC1S2Q6QNY1 142 aa22.26■■□□□ 1.15
PTN-201ENST00000348225 TTC14Q96N46 770 aa22.26■■□□□ 1.15
PTN-201ENST00000348225 CACNA1SQ13698 1873 aa22.26■■□□□ 1.15
PTN-201ENST00000348225 C6orf229H3BNL8 230 aa22.25■■□□□ 1.15
PTN-201ENST00000348225 CHAF1AQ13111 956 aaPredicted RBP22.25■■□□□ 1.15
PTN-201ENST00000348225 TDRD7Q8NHU6 1098 aaKnown RBP22.25■■□□□ 1.15
PTN-201ENST00000348225 PDRG1Q9NUG6 133 aa22.25■■□□□ 1.15
PTN-201ENST00000348225 CYP7A1P22680 504 aa22.24■■□□□ 1.15
PTN-201ENST00000348225 SPTY2D1Q68D10 685 aaPredicted RBP22.24■■□□□ 1.15
PTN-201ENST00000348225 WDR66Q8TBY9 1149 aa22.24■■□□□ 1.15
PTN-201ENST00000348225 PDGFDQ9GZP0 370 aaPredicted RBP22.24■■□□□ 1.15
PTN-201ENST00000348225 POLLQ9UGP5 575 aa22.24■■□□□ 1.15
PTN-201ENST00000348225 SALL1Q9NSC2 1324 aa22.24■■□□□ 1.15
PTN-201ENST00000348225 C10orf71Q711Q0 1435 aa22.24■■□□□ 1.15
PTN-201ENST00000348225 CCDC88AQ3V6T2 1871 aa22.24■■□□□ 1.15
PTN-201ENST00000348225 MBD4O95243 580 aa22.24■■□□□ 1.15
PTN-201ENST00000348225 GNAT2P19087 354 aa22.24■■□□□ 1.15
PTN-201ENST00000348225 IMMTQ16891 758 aaKnown RBP22.24■■□□□ 1.15
PTN-201ENST00000348225 MPNDQ8N594 471 aa22.24■■□□□ 1.15
PTN-201ENST00000348225 CNKSR1Q969H4 720 aa22.24■■□□□ 1.15
PTN-201ENST00000348225 GPR101Q96P66 508 aaPredicted RBP22.24■■□□□ 1.15
PTN-201ENST00000348225 STRBPQ96SI9 672 aaKnown RBP22.24■■□□□ 1.15
PTN-201ENST00000348225 FOXP2O15409 715 aa22.23■■□□□ 1.15
PTN-201ENST00000348225 NAA16Q6N069 864 aaPredicted RBP22.23■■□□□ 1.15
PTN-201ENST00000348225 TMX3Q96JJ7 454 aa22.23■■□□□ 1.15
PTN-201ENST00000348225 NEK1Q96PY6 1258 aa22.23■■□□□ 1.15
PTN-201ENST00000348225 FGAP02671 866 aa22.22■■□□□ 1.15
PTN-201ENST00000348225 HMGB1P09429 215 aaKnown RBP22.22■■□□□ 1.15
PTN-201ENST00000348225 RPS6KB1P23443 525 aa22.22■■□□□ 1.15
PTN-201ENST00000348225 AK2P54819 239 aa22.22■■□□□ 1.15
PTN-201ENST00000348225 DPP8Q6V1X1 898 aaPredicted RBP22.22■■□□□ 1.15
PTN-201ENST00000348225 CD209Q9NNX6 404 aa22.22■■□□□ 1.15
PTN-201ENST00000348225 CHMP5Q9NZZ3 219 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms