RNA–Protein interactions for RNA: ENST00000348069.6

NLRP3-202, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-202ENST00000348069 PDIA6Q15084 440 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 SKIDA1Q1XH10 827 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 ARHGAP29Q52LW3 1261 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 CREB3L3Q68CJ9 461 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 MSL1Q68DK7 614 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 PI16Q6UXB8 463 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 SYT10Q6XYQ8 523 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 SEPT12Q8IYM1 358 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 ERO1AQ96HE7 468 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 TMX1Q9H3N1 280 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 DNAI1Q9UI46 699 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 CFAP100Q494V2 611 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 ISM2Q6H9L7 571 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 SSH3Q8TE77 659 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 ZBTB9Q96C00 473 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 CCDC87Q9NVE4 849 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 TFCP2L1Q9NZI6 479 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 AFF2P51816 1311 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 CCP110O43303 1012 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 NR1I2O75469 434 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 IGHMBP2P38935 993 aaKnown RBP9.37□□□□□ -0.91
NLRP3-202ENST00000348069 CCT2P78371 535 aaKnown RBP9.37□□□□□ -0.91
NLRP3-202ENST00000348069 TCIRG1Q13488 830 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 ADCK5Q3MIX3 580 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 CHST3Q7LGC8 479 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.37□□□□□ -0.91
NLRP3-202ENST00000348069 CERKQ8TCT0 537 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 LEO1Q8WVC0 666 aaPredicted RBP9.37□□□□□ -0.91
NLRP3-202ENST00000348069 SEC62Q99442 399 aaKnown RBP9.37□□□□□ -0.91
NLRP3-202ENST00000348069 GREM2Q9H772 168 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 SEC31BQ9NQW1 1179 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 HEG1Q9ULI3 1381 aa9.37□□□□□ -0.91
NLRP3-202ENST00000348069 RAD21O60216 631 aa9.36□□□□□ -0.91
NLRP3-202ENST00000348069 KRT32Q14532 448 aa9.36□□□□□ -0.91
NLRP3-202ENST00000348069 TMEM87AQ8NBN3 555 aa9.36□□□□□ -0.91
NLRP3-202ENST00000348069 SETDB2Q96T68 719 aa9.36□□□□□ -0.91
NLRP3-202ENST00000348069 CLSTN2Q9H4D0 955 aa9.36□□□□□ -0.91
NLRP3-202ENST00000348069 SETD1AO15047 1707 aaKnown RBP9.36□□□□□ -0.91
NLRP3-202ENST00000348069 PTH1RQ03431 593 aa9.36□□□□□ -0.91
NLRP3-202ENST00000348069 ANKIB1Q9P2G1 1089 aa9.36□□□□□ -0.91
NLRP3-202ENST00000348069 RTCBQ9Y3I0 505 aaKnown RBP9.36□□□□□ -0.91
NLRP3-202ENST00000348069 A0A1B0GUL7 405 aa9.36□□□□□ -0.91
NLRP3-202ENST00000348069 PSEN1P49768 467 aa9.36□□□□□ -0.91
NLRP3-202ENST00000348069 HSP90B2PQ58FF3 399 aa9.36□□□□□ -0.91
NLRP3-202ENST00000348069 USPL1Q5W0Q7 1092 aa9.36□□□□□ -0.91
NLRP3-202ENST00000348069 ERCC4Q92889 916 aaPredicted RBP9.36□□□□□ -0.91
NLRP3-202ENST00000348069 LRP2BPQ9P2M1 347 aa9.36□□□□□ -0.91
NLRP3-202ENST00000348069 NMIQ13287 307 aaPredicted RBP9.35□□□□□ -0.91
NLRP3-202ENST00000348069 ERCC6LQ2NKX8 1250 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 TTLL5Q6EMB2 1281 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 OLFM4Q6UX06 510 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 CEMIPQ8WUJ3 1361 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 SASH1O94885 1247 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 MYCNP04198 464 aaPredicted RBP9.35□□□□□ -0.91
NLRP3-202ENST00000348069 LEKR1Q6ZMV7 388 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 STAP2Q9UGK3 403 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 CTNNA3Q9UI47 895 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 ZNF652Q9Y2D9 606 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 ITSN1Q15811 1721 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 CCDC191Q8NCU4 936 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 UTP14AQ9BVJ6 771 aaKnown RBP9.35□□□□□ -0.91
NLRP3-202ENST00000348069 TRIM34Q9BYJ4 488 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 LSG1Q9H089 658 aaKnown RBP9.35□□□□□ -0.91
NLRP3-202ENST00000348069 RAI14Q9P0K7 980 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 TPCN1Q9ULQ1 816 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 DLG5Q8TDM6 1919 aa9.35□□□□□ -0.91
NLRP3-202ENST00000348069 ADORA1P30542 326 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 FAM196AQ6ZSG2 479 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 LRRC8AQ8IWT6 810 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 CCDC82Q8N4S0 544 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 DDX41Q9UJV9 622 aaKnown RBP9.34□□□□□ -0.91
NLRP3-202ENST00000348069 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.34□□□□□ -0.91
NLRP3-202ENST00000348069 A0A087WWV3 80 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 ARID5BQ14865 1188 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 TNNI3KQ59H18 835 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 NOM1Q5C9Z4 860 aaKnown RBP9.34□□□□□ -0.91
NLRP3-202ENST00000348069 NEK1Q96PY6 1258 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 ZSCAN16Q9H4T2 348 aaPredicted RBP9.34□□□□□ -0.91
NLRP3-202ENST00000348069 ZSWIM4Q9H7M6 989 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 FPGT-TNNI3KV9GXZ4 949 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 NRKQ7Z2Y5 1582 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 JAK2O60674 1132 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 APBA3O96018 575 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 LMOD1P29536 600 aaPredicted RBP9.34□□□□□ -0.91
NLRP3-202ENST00000348069 ANKRD7Q92527 254 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 TMX4Q9H1E5 349 aaPredicted RBP9.34□□□□□ -0.91
NLRP3-202ENST00000348069 IFNKQ9P0W0 207 aa9.34□□□□□ -0.91
NLRP3-202ENST00000348069 KNDC1Q76NI1 1749 aa9.34□□□□□ -0.92
NLRP3-202ENST00000348069 KDM6AO15550 1401 aaPredicted RBP9.34□□□□□ -0.92
NLRP3-202ENST00000348069 AOX1Q06278 1338 aa9.33□□□□□ -0.92
NLRP3-202ENST00000348069 LMAN1P49257 510 aa9.33□□□□□ -0.92
NLRP3-202ENST00000348069 TERF2Q15554 542 aa9.33□□□□□ -0.92
NLRP3-202ENST00000348069 TSPYL1Q9H0U9 437 aa9.33□□□□□ -0.92
NLRP3-202ENST00000348069 SH3TC1Q8TE82 1336 aa9.33□□□□□ -0.92
NLRP3-202ENST00000348069 MON2Q7Z3U7 1717 aa9.33□□□□□ -0.92
NLRP3-202ENST00000348069 EPB41L2O43491 1005 aaKnown RBP9.33□□□□□ -0.92
NLRP3-202ENST00000348069 POLR3DP05423 398 aaPredicted RBP9.33□□□□□ -0.92
NLRP3-202ENST00000348069 SLC3A2P08195 630 aaKnown RBP9.33□□□□□ -0.92
NLRP3-202ENST00000348069 ITPK1Q13572 414 aa9.33□□□□□ -0.92
NLRP3-202ENST00000348069 MIGA1Q8NAN2 632 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms