RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 GBP3Q9H0R5 595 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 TLR7Q9NYK1 1049 aaKnown RBP11.97□□□□□ -0.49
SMG7-201ENST00000347615 DYDC1Q8WWB3 177 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 CTNNBL1Q8WYA6 563 aaPredicted RBP11.97□□□□□ -0.49
SMG7-201ENST00000347615 VPS16Q9H269 839 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 CLSTN2Q9H4D0 955 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 WWC3Q9ULE0 1092 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 VWA3AA6NCI4 1184 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 EVCP57679 992 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 UBXN1Q04323 297 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 CCDC24Q8N4L8 307 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 INSRP06213 1382 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 NBPF6Q5VWK0 638 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 NBPF4Q96M43 638 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 KCNJ14Q9UNX9 436 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 ADGRL2O95490 1459 aa11.97□□□□□ -0.49
SMG7-201ENST00000347615 PSMB7Q99436 277 aa11.96□□□□□ -0.49
SMG7-201ENST00000347615 RNF41Q9H4P4 317 aaPredicted RBP11.96□□□□□ -0.49
SMG7-201ENST00000347615 SHANK2Q9UPX8 1470 aa11.96□□□□□ -0.49
SMG7-201ENST00000347615 CTAGE15A4D2H0 777 aa11.96□□□□□ -0.49
SMG7-201ENST00000347615 A1BGP04217 495 aa11.96□□□□□ -0.49
SMG7-201ENST00000347615 CTAGE8P0CG41 777 aa11.96□□□□□ -0.49
SMG7-201ENST00000347615 PAFAH1B1P43034 410 aa11.96□□□□□ -0.49
SMG7-201ENST00000347615 PNOCQ13519 176 aa11.96□□□□□ -0.49
SMG7-201ENST00000347615 CTAGE6Q86UF2 777 aa11.96□□□□□ -0.49
SMG7-201ENST00000347615 CTAGE4Q8IX94 777 aa11.96□□□□□ -0.49
SMG7-201ENST00000347615 USO1O60763 962 aaKnown RBP11.96□□□□□ -0.49
SMG7-201ENST00000347615 TAF5LO75529 589 aa11.96□□□□□ -0.49
SMG7-201ENST00000347615 FAM160A1Q05DH4 1040 aa11.96□□□□□ -0.49
SMG7-201ENST00000347615 TTF1Q15361 905 aaPredicted RBP11.96□□□□□ -0.49
SMG7-201ENST00000347615 SEPT7Q16181 437 aaKnown RBP11.96□□□□□ -0.49
SMG7-201ENST00000347615 MAP9Q49MG5 647 aa11.96□□□□□ -0.49
SMG7-201ENST00000347615 CRACR2BQ8N4Y2 399 aaPredicted RBP11.96□□□□□ -0.49
SMG7-201ENST00000347615 TNRQ92752 1358 aa11.96□□□□□ -0.5
SMG7-201ENST00000347615 AKR1B10O60218 316 aa11.96□□□□□ -0.5
SMG7-201ENST00000347615 LARGE1O95461 756 aa11.96□□□□□ -0.5
SMG7-201ENST00000347615 IL15P40933 162 aaPredicted RBP11.96□□□□□ -0.5
SMG7-201ENST00000347615 ARMT1Q9H993 441 aa11.96□□□□□ -0.5
SMG7-201ENST00000347615 CTNND2Q9UQB3 1225 aa11.96□□□□□ -0.5
SMG7-201ENST00000347615 ZPR1O75312 459 aa11.96□□□□□ -0.5
SMG7-201ENST00000347615 GCP02774 474 aa11.96□□□□□ -0.5
SMG7-201ENST00000347615 POLR2DO15514 142 aaKnown RBP11.95□□□□□ -0.5
SMG7-201ENST00000347615 ADKP55263 362 aaKnown RBP11.95□□□□□ -0.5
SMG7-201ENST00000347615 PICALMQ13492 652 aa11.95□□□□□ -0.5
SMG7-201ENST00000347615 IL17REQ8NFR9 667 aa11.95□□□□□ -0.5
SMG7-201ENST00000347615 TSG101Q99816 390 aa11.95□□□□□ -0.5
SMG7-201ENST00000347615 TCP11L1Q9NUJ3 509 aa11.95□□□□□ -0.5
SMG7-201ENST00000347615 CCDC175P0C221 793 aa11.95□□□□□ -0.5
SMG7-201ENST00000347615 BAG1Q99933 345 aaPredicted RBP11.95□□□□□ -0.5
SMG7-201ENST00000347615 OGFRQ9NZT2 677 aa11.95□□□□□ -0.5
SMG7-201ENST00000347615 SMIM23A6NLE4 172 aa11.95□□□□□ -0.5
SMG7-201ENST00000347615 MBD4O95243 580 aa11.95□□□□□ -0.5
SMG7-201ENST00000347615 FANCCQ00597 558 aa11.95□□□□□ -0.5
SMG7-201ENST00000347615 KRBA2Q6ZNG9 492 aa11.95□□□□□ -0.5
SMG7-201ENST00000347615 ZCRB1Q8TBF4 217 aaKnown RBP11.95□□□□□ -0.5
SMG7-201ENST00000347615 ORAI2Q96SN7 254 aa11.95□□□□□ -0.5
SMG7-201ENST00000347615 ZFYVE9O95405 1425 aa11.95□□□□□ -0.5
SMG7-201ENST00000347615 CHMP4BP1P59074 171 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 PROSER3Q2NL68 480 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 EXOC1Q9NV70 894 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 KDM5AP29375 1690 aaKnown RBP11.94□□□□□ -0.5
SMG7-201ENST00000347615 CTAGE9A4FU28 777 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 MTX1Q13505 466 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 ZNF827Q17R98 1081 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 TTC6Q86TZ1 520 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 EAF2Q96CJ1 260 aaPredicted RBP11.94□□□□□ -0.5
SMG7-201ENST00000347615 PPP1R9BQ96SB3 815 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 TTC21AQ8NDW8 1320 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 DESI2Q9BSY9 194 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 MTMR6Q9Y217 621 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 SAMD9Q5K651 1589 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 C6orf229H3BNL8 230 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 ZEB2O60315 1214 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 ZNF202O95125 648 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 ASIC1P78348 528 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 IFT81Q8WYA0 676 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 GOLGA1Q92805 767 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 XPO4Q9C0E2 1151 aaKnown RBP11.94□□□□□ -0.5
SMG7-201ENST00000347615 NPC1L1Q9UHC9 1359 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 PPP2R3AQ06190 1150 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 SLFNL1Q499Z3 407 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 EEF2KMTQ96G04 330 aa11.94□□□□□ -0.5
SMG7-201ENST00000347615 CAVIN2O95810 425 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 ZNF790Q6PG37 636 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 BLZF1Q9H2G9 400 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 ERVK-7P63135 1459 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 ERCC6LQ2NKX8 1250 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 CALML4Q96GE6 196 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 USP28Q96RU2 1077 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 WDR7Q9Y4E6 1490 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 TSPY3P0CV98 308 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 TSPY8P0CW00 308 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 UBE4AQ14139 1066 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 ANO1Q5XXA6 986 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 XAGE2Q96GT9 111 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 ZNF518AQ6AHZ1 1483 aa11.93□□□□□ -0.5
SMG7-201ENST00000347615 IRS4O14654 1257 aaPredicted RBP11.92□□□□□ -0.5
SMG7-201ENST00000347615 TRIM75PA6NK02 468 aa11.92□□□□□ -0.5
SMG7-201ENST00000347615 EXOC5O00471 708 aa11.92□□□□□ -0.5
SMG7-201ENST00000347615 MYL5Q02045 173 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms