RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 C2CD5Q86YS7 1000 aa13.2□□□□□ -0.3
ECM1-201ENST00000346569 IL27Q8NEV9 243 aa13.2□□□□□ -0.3
ECM1-201ENST00000346569 TDRD7Q8NHU6 1098 aaKnown RBP13.2□□□□□ -0.3
ECM1-201ENST00000346569 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.2□□□□□ -0.3
ECM1-201ENST00000346569 PUS7LQ9H0K6 701 aaKnown RBP13.2□□□□□ -0.3
ECM1-201ENST00000346569 SPON1Q9HCB6 807 aa13.2□□□□□ -0.3
ECM1-201ENST00000346569 GGA1Q9UJY5 639 aa13.2□□□□□ -0.3
ECM1-201ENST00000346569 IQSEC3Q9UPP2 1182 aaPredicted RBP13.2□□□□□ -0.3
ECM1-201ENST00000346569 RBM8AQ9Y5S9 174 aaKnown RBP13.2□□□□□ -0.3
ECM1-201ENST00000346569 SNX14Q9Y5W7 946 aa13.2□□□□□ -0.3
ECM1-201ENST00000346569 MAST3O60307 1309 aa13.19□□□□□ -0.3
ECM1-201ENST00000346569 M0R2C6 588 aa13.19□□□□□ -0.3
ECM1-201ENST00000346569 PDE6AP16499 860 aa13.19□□□□□ -0.3
ECM1-201ENST00000346569 TSGA10IPQ3SY00 556 aa13.19□□□□□ -0.3
ECM1-201ENST00000346569 VPS37DQ86XT2 251 aa13.19□□□□□ -0.3
ECM1-201ENST00000346569 TBC1D16Q8TBP0 767 aa13.19□□□□□ -0.3
ECM1-201ENST00000346569 DSCC1Q9BVC3 393 aa13.19□□□□□ -0.3
ECM1-201ENST00000346569 WWC3Q9ULE0 1092 aa13.19□□□□□ -0.3
ECM1-201ENST00000346569 IDH1O75874 414 aaKnown RBP13.18□□□□□ -0.3
ECM1-201ENST00000346569 CD2BP2O95400 341 aaKnown RBP13.18□□□□□ -0.3
ECM1-201ENST00000346569 HSPD1P10809 573 aaKnown RBP13.18□□□□□ -0.3
ECM1-201ENST00000346569 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
ECM1-201ENST00000346569 CREB3L3Q68CJ9 461 aa13.18□□□□□ -0.3
ECM1-201ENST00000346569 C7orf43Q8WVR3 580 aa13.18□□□□□ -0.3
ECM1-201ENST00000346569 ZNF532Q9HCE3 1301 aa13.17□□□□□ -0.3
ECM1-201ENST00000346569 SLC27A2O14975 620 aa13.17□□□□□ -0.3
ECM1-201ENST00000346569 FOXP2O15409 715 aa13.17□□□□□ -0.3
ECM1-201ENST00000346569 UFL1O94874 794 aa13.17□□□□□ -0.3
ECM1-201ENST00000346569 PTGER2P43116 358 aa13.17□□□□□ -0.3
ECM1-201ENST00000346569 WASHC4Q2M389 1173 aa13.17□□□□□ -0.3
ECM1-201ENST00000346569 VPS53Q5VIR6 699 aa13.17□□□□□ -0.3
ECM1-201ENST00000346569 PRPF40BQ6NWY9 871 aaKnown RBP13.17□□□□□ -0.3
ECM1-201ENST00000346569 ZNF622Q969S3 477 aaKnown RBP eCLIP13.17□□□□□ -0.3
ECM1-201ENST00000346569 TM6SF1Q9BZW5 370 aa13.17□□□□□ -0.3
ECM1-201ENST00000346569 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
ECM1-201ENST00000346569 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
ECM1-201ENST00000346569 IGSF3O75054 1194 aa13.16□□□□□ -0.3
ECM1-201ENST00000346569 IL1R1P14778 569 aa13.16□□□□□ -0.3
ECM1-201ENST00000346569 CHRNA5P30532 468 aa13.16□□□□□ -0.3
ECM1-201ENST00000346569 MPNDQ8N594 471 aa13.16□□□□□ -0.3
ECM1-201ENST00000346569 CNKSR1Q969H4 720 aa13.16□□□□□ -0.3
ECM1-201ENST00000346569 GPR101Q96P66 508 aaPredicted RBP13.16□□□□□ -0.3
ECM1-201ENST00000346569 CD209Q9NNX6 404 aa13.16□□□□□ -0.3
ECM1-201ENST00000346569 LRP2BPQ9P2M1 347 aa13.16□□□□□ -0.3
ECM1-201ENST00000346569 GPAA1O43292 621 aa13.15□□□□□ -0.3
ECM1-201ENST00000346569 KCNA3P22001 575 aa13.15□□□□□ -0.3
ECM1-201ENST00000346569 NEK4P51957 841 aa13.15□□□□□ -0.3
ECM1-201ENST00000346569 ADCK5Q3MIX3 580 aa13.15□□□□□ -0.3
ECM1-201ENST00000346569 OLFM4Q6UX06 510 aa13.15□□□□□ -0.3
ECM1-201ENST00000346569 ZNF804AQ7Z570 1209 aa13.15□□□□□ -0.3
ECM1-201ENST00000346569 MAGEB6Q8N7X4 407 aa13.15□□□□□ -0.3
ECM1-201ENST00000346569 ZNF384Q8TF68 577 aa13.15□□□□□ -0.3
ECM1-201ENST00000346569 STRBPQ96SI9 672 aaKnown RBP13.15□□□□□ -0.3
ECM1-201ENST00000346569 SGIP1Q9BQI5 828 aa13.15□□□□□ -0.3
ECM1-201ENST00000346569 MYO5AQ9Y4I1 1855 aaKnown RBP13.15□□□□□ -0.3
ECM1-201ENST00000346569 LRRC37AA6NMS7 1700 aa13.15□□□□□ -0.3
ECM1-201ENST00000346569 SALL1Q9NSC2 1324 aa13.15□□□□□ -0.3
ECM1-201ENST00000346569 C10orf71Q711Q0 1435 aa13.15□□□□□ -0.31
ECM1-201ENST00000346569 C6orf229H3BNL8 230 aa13.14□□□□□ -0.31
ECM1-201ENST00000346569 FRAT2O75474 233 aaPredicted RBP13.14□□□□□ -0.31
ECM1-201ENST00000346569 ZBTB7AO95365 584 aa13.14□□□□□ -0.31
ECM1-201ENST00000346569 TMED8Q6PL24 325 aaPredicted RBP13.14□□□□□ -0.31
ECM1-201ENST00000346569 HSCBQ8IWL3 235 aa13.14□□□□□ -0.31
ECM1-201ENST00000346569 MTFR1LQ9H019 292 aa13.14□□□□□ -0.31
ECM1-201ENST00000346569 ZSWIM6Q9HCJ5 1215 aa13.14□□□□□ -0.31
ECM1-201ENST00000346569 DAXXQ9UER7 740 aaPredicted RBP13.14□□□□□ -0.31
ECM1-201ENST00000346569 ABCF2Q9UG63 623 aa13.14□□□□□ -0.31
ECM1-201ENST00000346569 FGAP02671 866 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 CYP21A2P08686 494 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 ZKSCAN1P17029 563 aaPredicted RBP13.13□□□□□ -0.31
ECM1-201ENST00000346569 ALX1Q15699 326 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 WDR66Q8TBY9 1149 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 NSUN4Q96CB9 384 aaKnown RBP13.13□□□□□ -0.31
ECM1-201ENST00000346569 TTC14Q96N46 770 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 RTFDC1Q9BY42 306 aaPredicted RBP13.13□□□□□ -0.31
ECM1-201ENST00000346569 TAF6LQ9Y6J9 622 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 COL11A2P13942 1736 aaPredicted RBP13.13□□□□□ -0.31
ECM1-201ENST00000346569 LTBP1Q14766 1721 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 DOCK2Q92608 1830 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 PATL2C9JE40 543 aaKnown RBP13.13□□□□□ -0.31
ECM1-201ENST00000346569 K7ELQ4 463 aaPredicted RBP13.13□□□□□ -0.31
ECM1-201ENST00000346569 ST18O60284 1047 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 CYP7A1P22680 504 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 CC2D2BQ6DHV5 1058 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 DPP8Q6V1X1 898 aaPredicted RBP13.13□□□□□ -0.31
ECM1-201ENST00000346569 ERICH6Q7L0X2 663 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 COA1Q9GZY4 146 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 RAI14Q9P0K7 980 aa13.13□□□□□ -0.31
ECM1-201ENST00000346569 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
ECM1-201ENST00000346569 FAM205AQ6ZU69 1335 aa13.12□□□□□ -0.31
ECM1-201ENST00000346569 MYH7P12883 1935 aa13.12□□□□□ -0.31
ECM1-201ENST00000346569 PSMA5P28066 241 aa13.12□□□□□ -0.31
ECM1-201ENST00000346569 TGFB2P61812 414 aa13.12□□□□□ -0.31
ECM1-201ENST00000346569 CHAF1AQ13111 956 aaPredicted RBP13.12□□□□□ -0.31
ECM1-201ENST00000346569 SPTY2D1Q68D10 685 aaPredicted RBP13.12□□□□□ -0.31
ECM1-201ENST00000346569 ADGRA1Q86SQ6 560 aa13.12□□□□□ -0.31
ECM1-201ENST00000346569 ZGPATQ8N5A5 531 aaKnown RBP13.12□□□□□ -0.31
ECM1-201ENST00000346569 UPF3BQ9BZI7 483 aaKnown RBP13.12□□□□□ -0.31
ECM1-201ENST00000346569 ZC3H12CQ9C0D7 883 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms