RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 CREBZFQ9NS37 354 aa17.09■□□□□ 0.33
TPM4-202ENST00000344824 GGA3Q9NZ52 723 aa17.09■□□□□ 0.33
TPM4-202ENST00000344824 MKRN1Q9UHC7 482 aaKnown RBP17.09■□□□□ 0.33
TPM4-202ENST00000344824 IQSEC3Q9UPP2 1182 aaPredicted RBP17.09■□□□□ 0.33
TPM4-202ENST00000344824 PCDHB15Q9Y5E8 787 aa17.09■□□□□ 0.33
TPM4-202ENST00000344824 F8W031 263 aaPredicted RBP17.08■□□□□ 0.32
TPM4-202ENST00000344824 FRAT2O75474 233 aaPredicted RBP17.08■□□□□ 0.32
TPM4-202ENST00000344824 PDE8BO95263 885 aa17.08■□□□□ 0.32
TPM4-202ENST00000344824 HIBADHP31937 336 aaKnown RBP17.08■□□□□ 0.32
TPM4-202ENST00000344824 AAMPQ13685 434 aa17.08■□□□□ 0.32
TPM4-202ENST00000344824 OGFOD1Q8N543 542 aa17.08■□□□□ 0.32
TPM4-202ENST00000344824 DCPSQ96C86 337 aaKnown RBP17.08■□□□□ 0.32
TPM4-202ENST00000344824 MYOZ2Q9NPC6 264 aa17.08■□□□□ 0.32
TPM4-202ENST00000344824 ABT1Q9ULW3 272 aaKnown RBP17.08■□□□□ 0.32
TPM4-202ENST00000344824 ASTN2O75129 1339 aaPredicted RBP17.07■□□□□ 0.32
TPM4-202ENST00000344824 IFIT1P09914 478 aaKnown RBP17.07■□□□□ 0.32
TPM4-202ENST00000344824 IL1R1P14778 569 aa17.07■□□□□ 0.32
TPM4-202ENST00000344824 CHAF1AQ13111 956 aaPredicted RBP17.07■□□□□ 0.32
TPM4-202ENST00000344824 PUM3Q15397 648 aaKnown RBP17.07■□□□□ 0.32
TPM4-202ENST00000344824 CAVIN4Q5BKX8 364 aa17.07■□□□□ 0.32
TPM4-202ENST00000344824 VGLL2Q8N8G2 317 aa17.07■□□□□ 0.32
TPM4-202ENST00000344824 ZC3H15Q8WU90 426 aaKnown RBP17.07■□□□□ 0.32
TPM4-202ENST00000344824 KLRG1Q96E93 195 aa17.07■□□□□ 0.32
TPM4-202ENST00000344824 GMLQ99445 158 aa17.07■□□□□ 0.32
TPM4-202ENST00000344824 HDAC9Q9UKV0 1011 aa17.07■□□□□ 0.32
TPM4-202ENST00000344824 SASH1O94885 1247 aa17.06■□□□□ 0.32
TPM4-202ENST00000344824 SLC5A1P13866 664 aa17.06■□□□□ 0.32
TPM4-202ENST00000344824 ZNF280AP59817 542 aaPredicted RBP17.06■□□□□ 0.32
TPM4-202ENST00000344824 CACNB1Q02641 598 aaPredicted RBP17.06■□□□□ 0.32
TPM4-202ENST00000344824 PAXIP1Q6ZW49 1069 aaPredicted RBP17.06■□□□□ 0.32
TPM4-202ENST00000344824 ATG9AQ7Z3C6 839 aa17.06■□□□□ 0.32
TPM4-202ENST00000344824 KRT26Q7Z3Y9 468 aa17.06■□□□□ 0.32
TPM4-202ENST00000344824 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
TPM4-202ENST00000344824 ADM5C9JUS6 153 aa17.05■□□□□ 0.32
TPM4-202ENST00000344824 KCNA4P22459 653 aa17.05■□□□□ 0.32
TPM4-202ENST00000344824 SCARF1Q14162 830 aa17.05■□□□□ 0.32
TPM4-202ENST00000344824 ANGEL2Q5VTE6 544 aaKnown RBP17.05■□□□□ 0.32
TPM4-202ENST00000344824 CDC37L1Q7L3B6 337 aa17.05■□□□□ 0.32
TPM4-202ENST00000344824 FAM84BQ96KN1 310 aaPredicted RBP17.05■□□□□ 0.32
TPM4-202ENST00000344824 CEP126Q9P2H0 1117 aa17.05■□□□□ 0.32
TPM4-202ENST00000344824 CIAO1O76071 339 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 CELF2O95319 508 aaKnown RBP17.04■□□□□ 0.32
TPM4-202ENST00000344824 IL15P40933 162 aaPredicted RBP17.04■□□□□ 0.32
TPM4-202ENST00000344824 GRM1Q13255 1194 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 ATP2B3Q16720 1220 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 DLK2Q6UY11 383 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 SULF1Q8IWU6 871 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 CERS5Q8N5B7 392 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 PNMA6EA0A0J9YXQ4 647 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 BCAMP50895 628 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 MFSD14BQ5SR56 506 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 DNAJC5GQ8N7S2 189 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 TDRD7Q8NHU6 1098 aaKnown RBP17.04■□□□□ 0.32
TPM4-202ENST00000344824 LPIN2Q92539 896 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 RNF39Q9H2S5 420 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 COPRSQ9NQ92 184 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 PGAP2Q9UHJ9 254 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 FBXO3Q9UK99 471 aa17.04■□□□□ 0.32
TPM4-202ENST00000344824 SCAF8Q9UPN6 1271 aaKnown RBP17.04■□□□□ 0.32
TPM4-202ENST00000344824 RBM5P52756 815 aaKnown RBP eCLIP17.03■□□□□ 0.328e-6■■■■□ 20.7
TPM4-202ENST00000344824 MTX1Q13505 466 aa17.03■□□□□ 0.32
TPM4-202ENST00000344824 NBPF9Q3BBW0 867 aa17.03■□□□□ 0.32
TPM4-202ENST00000344824 IGHDP01880 384 aa17.02■□□□□ 0.31
TPM4-202ENST00000344824 FGFR2P21802 821 aa17.02■□□□□ 0.31
TPM4-202ENST00000344824 OS9Q13438 667 aaPredicted RBP17.02■□□□□ 0.31
TPM4-202ENST00000344824 CEP85Q6P2H3 762 aa17.02■□□□□ 0.31
TPM4-202ENST00000344824 CNTNAP1P78357 1384 aa17.02■□□□□ 0.31
TPM4-202ENST00000344824 DLGAP5Q15398 846 aa17.01■□□□□ 0.31
TPM4-202ENST00000344824 FBXO33Q7Z6M2 555 aa17.01■□□□□ 0.31
TPM4-202ENST00000344824 FAM205AQ6ZU69 1335 aa17■□□□□ 0.31
TPM4-202ENST00000344824 PCNTO95613 3336 aa17■□□□□ 0.31
TPM4-202ENST00000344824 WNT10BO00744 389 aa17■□□□□ 0.31
TPM4-202ENST00000344824 TFCP2Q12800 502 aa17■□□□□ 0.31
TPM4-202ENST00000344824 G3BP1Q13283 466 aaKnown RBP eCLIP17■□□□□ 0.315e-7■□□□□ 11.1
TPM4-202ENST00000344824 SIRT2Q8IXJ6 389 aa17■□□□□ 0.31
TPM4-202ENST00000344824 RWDD1Q9H446 243 aaPredicted RBP17■□□□□ 0.31
TPM4-202ENST00000344824 TTF2Q9UNY4 1162 aaKnown RBP17■□□□□ 0.31
TPM4-202ENST00000344824 COL1A1P02452 1464 aaPredicted RBP16.99■□□□□ 0.31
TPM4-202ENST00000344824 FKBP1AP62942 108 aaKnown RBP16.99■□□□□ 0.31
TPM4-202ENST00000344824 DEFB115Q30KQ5 88 aa16.99■□□□□ 0.31
TPM4-202ENST00000344824 CFAP100Q494V2 611 aa16.99■□□□□ 0.31
TPM4-202ENST00000344824 CST9Q5W186 159 aa16.99■□□□□ 0.31
TPM4-202ENST00000344824 RPAP2Q8IXW5 612 aaPredicted RBP16.99■□□□□ 0.31
TPM4-202ENST00000344824 PCDHAC2Q9Y5I4 1007 aa16.99■□□□□ 0.31
TPM4-202ENST00000344824 ADORA1P30542 326 aa16.98■□□□□ 0.31
TPM4-202ENST00000344824 CDCA5Q96FF9 252 aa16.98■□□□□ 0.31
TPM4-202ENST00000344824 NEUROD6Q96NK8 337 aa16.98■□□□□ 0.31
TPM4-202ENST00000344824 PITPNM2Q9BZ72 1349 aa16.98■□□□□ 0.31
TPM4-202ENST00000344824 A0A1B0GUL7 405 aa16.97■□□□□ 0.31
TPM4-202ENST00000344824 CLRN2A0PK11 232 aa16.97■□□□□ 0.31
TPM4-202ENST00000344824 VEGFBP49765 207 aa16.97■□□□□ 0.31
TPM4-202ENST00000344824 ATP8B2P98198 1209 aa16.97■□□□□ 0.31
TPM4-202ENST00000344824 TBC1D22AQ8WUA7 517 aa16.97■□□□□ 0.31
TPM4-202ENST00000344824 VEZTQ9HBM0 779 aa16.97■□□□□ 0.31
TPM4-202ENST00000344824 GNL3LQ9NVN8 582 aaKnown RBP16.97■□□□□ 0.31
TPM4-202ENST00000344824 AKAP2Q9Y2D5 859 aa16.97■□□□□ 0.31
TPM4-202ENST00000344824 AK9Q5TCS8 1911 aa16.97■□□□□ 0.31
TPM4-202ENST00000344824 MYH2Q9UKX2 1941 aa16.97■□□□□ 0.31
TPM4-202ENST00000344824 RASSF10A6NK89 507 aa16.96■□□□□ 0.31
TPM4-202ENST00000344824 MYO1BO43795 1136 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms