RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 GRM8O00222 908 aa20.43■□□□□ 0.86
SMC4-201ENST00000344722 MACROD2A1Z1Q3 448 aa20.42■□□□□ 0.86
SMC4-201ENST00000344722 LRMPQ12912 555 aa20.42■□□□□ 0.86
SMC4-201ENST00000344722 FAM173BQ6P4H8 233 aa20.42■□□□□ 0.86
SMC4-201ENST00000344722 STARD3NLO95772 234 aa20.42■□□□□ 0.86
SMC4-201ENST00000344722 TMTC1Q8IUR5 882 aa20.42■□□□□ 0.86
SMC4-201ENST00000344722 KLHL34Q8N239 644 aa20.42■□□□□ 0.86
SMC4-201ENST00000344722 FAM69CQ0P6D2 419 aa20.42■□□□□ 0.86
SMC4-201ENST00000344722 CWC25Q9NXE8 425 aaPredicted RBP20.42■□□□□ 0.86
SMC4-201ENST00000344722 ANO1Q5XXA6 986 aa20.41■□□□□ 0.86
SMC4-201ENST00000344722 CDC37L1Q7L3B6 337 aa20.41■□□□□ 0.86
SMC4-201ENST00000344722 ATP6V1AP38606 617 aa20.41■□□□□ 0.86
SMC4-201ENST00000344722 ZNF444Q8N0Y2 327 aaPredicted RBP20.41■□□□□ 0.86
SMC4-201ENST00000344722 PAG1Q9NWQ8 432 aa20.41■□□□□ 0.86
SMC4-201ENST00000344722 CDC25BP30305 580 aa20.41■□□□□ 0.86
SMC4-201ENST00000344722 SETDB1Q15047 1291 aa20.41■□□□□ 0.86
SMC4-201ENST00000344722 C8orf74Q6P047 294 aa20.41■□□□□ 0.86
SMC4-201ENST00000344722 MLKLQ8NB16 471 aa20.41■□□□□ 0.86
SMC4-201ENST00000344722 BUB1BO60566 1050 aaPredicted RBP20.41■□□□□ 0.86
SMC4-201ENST00000344722 ATP11AP98196 1134 aa20.41■□□□□ 0.86
SMC4-201ENST00000344722 PKP1Q13835 747 aa20.41■□□□□ 0.86
SMC4-201ENST00000344722 RBM28Q9NW13 759 aaKnown RBP20.41■□□□□ 0.86
SMC4-201ENST00000344722 NAA16Q6N069 864 aaPredicted RBP20.4■□□□□ 0.86
SMC4-201ENST00000344722 KSR2Q6VAB6 950 aa20.4■□□□□ 0.86
SMC4-201ENST00000344722 POLKQ9UBT6 870 aa20.4■□□□□ 0.86
SMC4-201ENST00000344722 TOM1L2Q6ZVM7 507 aa20.4■□□□□ 0.86
SMC4-201ENST00000344722 XPO4Q9C0E2 1151 aaKnown RBP20.4■□□□□ 0.86
SMC4-201ENST00000344722 PZPP20742 1482 aa20.4■□□□□ 0.86
SMC4-201ENST00000344722 SPATS2Q86XZ4 545 aaKnown RBP20.4■□□□□ 0.86
SMC4-201ENST00000344722 IFT20Q8IY31 132 aa20.4■□□□□ 0.86
SMC4-201ENST00000344722 ETF1P62495 437 aaKnown RBP20.4■□□□□ 0.86
SMC4-201ENST00000344722 WWC2Q6AWC2 1192 aa20.4■□□□□ 0.86
SMC4-201ENST00000344722 TBC1D5Q92609 795 aa20.4■□□□□ 0.86
SMC4-201ENST00000344722 RPGRIP1Q96KN7 1286 aa20.4■□□□□ 0.86
SMC4-201ENST00000344722 DUOX2Q9NRD8 1548 aa20.4■□□□□ 0.86
SMC4-201ENST00000344722 UQCRFS1P1P0C7P4 283 aa20.4■□□□□ 0.86
SMC4-201ENST00000344722 LMNTD2Q8IXW0 634 aa20.4■□□□□ 0.86
SMC4-201ENST00000344722 PAIP2Q9BPZ3 127 aaKnown RBP20.4■□□□□ 0.86
SMC4-201ENST00000344722 CLGNO14967 610 aa20.39■□□□□ 0.86
SMC4-201ENST00000344722 RNF113AO15541 343 aaKnown RBP20.39■□□□□ 0.86
SMC4-201ENST00000344722 TM6SF1Q9BZW5 370 aa20.39■□□□□ 0.86
SMC4-201ENST00000344722 TRIM7Q9C029 511 aa20.39■□□□□ 0.86
SMC4-201ENST00000344722 PSDA5PKW4 1024 aaPredicted RBP20.39■□□□□ 0.85
SMC4-201ENST00000344722 FMNL3Q8IVF7 1028 aa20.39■□□□□ 0.85
SMC4-201ENST00000344722 IQUBQ8NA54 791 aa20.39■□□□□ 0.85
SMC4-201ENST00000344722 UBLCP1Q8WVY7 318 aaPredicted RBP20.39■□□□□ 0.85
SMC4-201ENST00000344722 PA2G4Q9UQ80 394 aaKnown RBP20.39■□□□□ 0.85
SMC4-201ENST00000344722 GSPT1P15170 499 aaKnown RBP20.39■□□□□ 0.85
SMC4-201ENST00000344722 WHAMMP3Q1A5X7 153 aa20.39■□□□□ 0.85
SMC4-201ENST00000344722 STXBP4Q6ZWJ1 553 aa20.39■□□□□ 0.85
SMC4-201ENST00000344722 MTRF1LQ9UGC7 380 aaKnown RBP20.39■□□□□ 0.85
SMC4-201ENST00000344722 ASIC1P78348 528 aa20.39■□□□□ 0.85
SMC4-201ENST00000344722 MAP3K9P80192 1104 aa20.39■□□□□ 0.85
SMC4-201ENST00000344722 KIAA1524Q8TCG1 905 aa20.39■□□□□ 0.85
SMC4-201ENST00000344722 KAT14Q9H8E8 782 aa20.39■□□□□ 0.85
SMC4-201ENST00000344722 ZNF202O95125 648 aa20.38■□□□□ 0.85
SMC4-201ENST00000344722 HPDP32754 393 aaPredicted RBP20.38■□□□□ 0.85
SMC4-201ENST00000344722 ZRANB1Q9UGI0 708 aa20.38■□□□□ 0.85
SMC4-201ENST00000344722 KCNH3Q9ULD8 1083 aa20.38■□□□□ 0.85
SMC4-201ENST00000344722 SPATA31E1Q6ZUB1 1445 aa20.38■□□□□ 0.85
SMC4-201ENST00000344722 KRT13P13646 458 aa20.38■□□□□ 0.85
SMC4-201ENST00000344722 CTNNA2P26232 953 aa20.38■□□□□ 0.85
SMC4-201ENST00000344722 THEMISQ8N1K5 641 aaPredicted RBP20.38■□□□□ 0.85
SMC4-201ENST00000344722 TTC21AQ8NDW8 1320 aa20.38■□□□□ 0.85
SMC4-201ENST00000344722 SPTY2D1Q68D10 685 aaPredicted RBP20.38■□□□□ 0.85
SMC4-201ENST00000344722 MED4Q9NPJ6 270 aa20.38■□□□□ 0.85
SMC4-201ENST00000344722 PPFIBP2Q8ND30 876 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 JAKMIP2Q96AA8 810 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 IKBKGQ9Y6K9 419 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 FBLN1P23142 703 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 FAM71BQ8TC56 605 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 HOMER2Q9NSB8 354 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 KRT2P35908 639 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 TRIM35Q9UPQ4 493 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 ANXA1P04083 346 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 CCT6AP40227 531 aaKnown RBP20.37■□□□□ 0.85
SMC4-201ENST00000344722 IL15P40933 162 aaPredicted RBP20.37■□□□□ 0.85
SMC4-201ENST00000344722 PDE4BQ07343 736 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 RUFY4Q6ZNE9 571 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 ESR2Q92731 530 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 CABS1Q96KC9 395 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 HELLSQ9NRZ9 838 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 STIM2Q9P246 746 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 RGS12O14924 1447 aa20.37■□□□□ 0.85
SMC4-201ENST00000344722 CUTAO60888 179 aa20.36■□□□□ 0.85
SMC4-201ENST00000344722 CHST3Q7LGC8 479 aa20.36■□□□□ 0.85
SMC4-201ENST00000344722 CCDC26Q8TAB7 109 aa20.36■□□□□ 0.85
SMC4-201ENST00000344722 PHACTR3Q96KR7 559 aa20.36■□□□□ 0.85
SMC4-201ENST00000344722 MTX1Q13505 466 aa20.36■□□□□ 0.85
SMC4-201ENST00000344722 TRMT2AQ8IZ69 625 aaKnown RBP20.36■□□□□ 0.85
SMC4-201ENST00000344722 TNIP1Q15025 636 aa20.36■□□□□ 0.85
SMC4-201ENST00000344722 ANKRD13DQ6ZTN6 518 aa20.36■□□□□ 0.85
SMC4-201ENST00000344722 OSCARQ8IYS5 282 aa20.36■□□□□ 0.85
SMC4-201ENST00000344722 TLDC2A0PJX2 215 aa20.36■□□□□ 0.85
SMC4-201ENST00000344722 GIGYF1O75420 1035 aaPredicted RBP20.36■□□□□ 0.85
SMC4-201ENST00000344722 LRRC45Q96CN5 670 aa20.36■□□□□ 0.85
SMC4-201ENST00000344722 EFCC1Q9HA90 598 aa20.36■□□□□ 0.85
SMC4-201ENST00000344722 LDHAL6AQ6ZMR3 332 aa20.35■□□□□ 0.85
SMC4-201ENST00000344722 RRP15Q9Y3B9 282 aaKnown RBP20.35■□□□□ 0.85
SMC4-201ENST00000344722 ATP5J2-PTCD1G3V325 749 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms