RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 CLTCL1P53675 1640 aa17.92■□□□□ 0.46
CARMIL3-201ENST00000342740 EHMT1Q9H9B1 1298 aa17.92■□□□□ 0.46
CARMIL3-201ENST00000342740 ZAP70P43403 619 aa17.91■□□□□ 0.46
CARMIL3-201ENST00000342740 MTIF2P46199 727 aaKnown RBP17.91■□□□□ 0.46
CARMIL3-201ENST00000342740 SPA17Q15506 151 aa17.91■□□□□ 0.46
CARMIL3-201ENST00000342740 NUP88Q99567 741 aaPredicted RBP17.91■□□□□ 0.46
CARMIL3-201ENST00000342740 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
CARMIL3-201ENST00000342740 A2ML1A8K2U0 1454 aa17.91■□□□□ 0.46
CARMIL3-201ENST00000342740 PRKCSHP14314 528 aaPredicted RBP17.91■□□□□ 0.46
CARMIL3-201ENST00000342740 ERBB3P21860 1342 aa17.91■□□□□ 0.46
CARMIL3-201ENST00000342740 NAPAP54920 295 aa17.91■□□□□ 0.46
CARMIL3-201ENST00000342740 CCDC24Q8N4L8 307 aa17.91■□□□□ 0.46
CARMIL3-201ENST00000342740 DNAJC25Q9H1X3 360 aa17.91■□□□□ 0.46
CARMIL3-201ENST00000342740 MATR3P43243 847 aaKnown RBP eCLIP17.91■□□□□ 0.46
CARMIL3-201ENST00000342740 BRAPQ7Z569 592 aa17.91■□□□□ 0.46
CARMIL3-201ENST00000342740 MAP3K4Q9Y6R4 1608 aa17.9■□□□□ 0.46
CARMIL3-201ENST00000342740 CALML3P27482 149 aa17.9■□□□□ 0.46
CARMIL3-201ENST00000342740 PPP4R3BQ5MIZ7 849 aa17.9■□□□□ 0.46
CARMIL3-201ENST00000342740 C16orf45Q96MC5 204 aaPredicted RBP17.9■□□□□ 0.46
CARMIL3-201ENST00000342740 RDXP35241 583 aaKnown RBP17.9■□□□□ 0.46
CARMIL3-201ENST00000342740 WDR78Q5VTH9 848 aa17.9■□□□□ 0.46
CARMIL3-201ENST00000342740 TRMT1LQ7Z2T5 733 aaKnown RBP17.9■□□□□ 0.46
CARMIL3-201ENST00000342740 HDAC9Q9UKV0 1011 aa17.9■□□□□ 0.46
CARMIL3-201ENST00000342740 ERLIN1O75477 346 aa17.89■□□□□ 0.46
CARMIL3-201ENST00000342740 CARD10Q9BWT7 1032 aa17.89■□□□□ 0.46
CARMIL3-201ENST00000342740 IBTKQ9P2D0 1353 aaPredicted RBP17.89■□□□□ 0.45
CARMIL3-201ENST00000342740 URI1O94763 535 aaPredicted RBP17.89■□□□□ 0.45
CARMIL3-201ENST00000342740 TNNT1P13805 278 aa17.89■□□□□ 0.45
CARMIL3-201ENST00000342740 TMEM87BQ96K49 555 aa17.89■□□□□ 0.45
CARMIL3-201ENST00000342740 NCOA5Q9HCD5 579 aaKnown RBP17.89■□□□□ 0.45
CARMIL3-201ENST00000342740 ANGEL1Q9UNK9 670 aaKnown RBP17.89■□□□□ 0.45
CARMIL3-201ENST00000342740 UFL1O94874 794 aa17.89■□□□□ 0.45
CARMIL3-201ENST00000342740 CDK12Q9NYV4 1490 aaPredicted RBP17.88■□□□□ 0.45
CARMIL3-201ENST00000342740 KIF5CO60282 957 aa17.88■□□□□ 0.45
CARMIL3-201ENST00000342740 TYRO3Q06418 890 aa17.88■□□□□ 0.45
CARMIL3-201ENST00000342740 EYA3Q99504 573 aa17.88■□□□□ 0.45
CARMIL3-201ENST00000342740 MROH5Q6ZUA9 1318 aa17.88■□□□□ 0.45
CARMIL3-201ENST00000342740 YEATS4O95619 227 aa17.88■□□□□ 0.45
CARMIL3-201ENST00000342740 TTLL12Q14166 644 aaPredicted RBP17.88■□□□□ 0.45
CARMIL3-201ENST00000342740 RBM17Q96I25 401 aaKnown RBP17.88■□□□□ 0.45
CARMIL3-201ENST00000342740 USP21Q9UK80 565 aa17.88■□□□□ 0.45
CARMIL3-201ENST00000342740 SKIDA1Q1XH10 827 aa17.88■□□□□ 0.45
CARMIL3-201ENST00000342740 KIF4BQ2VIQ3 1234 aa17.88■□□□□ 0.45
CARMIL3-201ENST00000342740 FAM173BQ6P4H8 233 aa17.88■□□□□ 0.45
CARMIL3-201ENST00000342740 UNC13BO14795 1591 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 N4BP3O15049 544 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 DTNBO60941 627 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 STAT6P42226 847 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 ENOX2Q16206 610 aaKnown RBP17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 HSP90AA4PQ58FG1 418 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 AXDND1Q5T1B0 1012 aaPredicted RBP17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 SPATA5Q8NB90 893 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 PRAMEF22A3QJZ6 481 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 UBASH3AP57075 661 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 C6orf50Q9HD87 102 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 ASAP1Q9ULH1 1129 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 RNF17Q9BXT8 1623 aaKnown RBP17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 PRDM1O75626 825 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 CTSWP56202 376 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 TM6SF1Q9BZW5 370 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 RMND1Q9NWS8 449 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 WWC3Q9ULE0 1092 aa17.87■□□□□ 0.45
CARMIL3-201ENST00000342740 TRPM1Q7Z4N2 1603 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 CCDC40Q4G0X9 1142 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 TEX11Q8IYF3 940 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 ZBTB38Q8NAP3 1195 aaPredicted RBP17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 TAF4BQ92750 862 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 LLPHQ9BRT6 129 aaKnown RBP17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 RRAGBQ5VZM2 374 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 DHX58Q96C10 678 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 TRIM47Q96LD4 638 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 ZNF532Q9HCE3 1301 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 KRT2P35908 639 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 TRAF1Q13077 416 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 IQCEQ6IPM2 695 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 TTC6Q86TZ1 520 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 AOPEPQ8N6M6 819 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 COPRSQ9NQ92 184 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 PCCAP05165 728 aaPredicted RBP17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 LRRC27Q9C0I9 530 aa17.86■□□□□ 0.45
CARMIL3-201ENST00000342740 TDRD12Q587J7 1177 aaKnown RBP17.85■□□□□ 0.45
CARMIL3-201ENST00000342740 TCERG1LQ5VWI1 586 aa17.85■□□□□ 0.45
CARMIL3-201ENST00000342740 ATL3Q6DD88 541 aa17.85■□□□□ 0.45
CARMIL3-201ENST00000342740 WDR17Q8IZU2 1322 aa17.85■□□□□ 0.45
CARMIL3-201ENST00000342740 ERLIN2O94905 339 aa17.85■□□□□ 0.45
CARMIL3-201ENST00000342740 CCDC186Q7Z3E2 898 aa17.85■□□□□ 0.45
CARMIL3-201ENST00000342740 EXOC1Q9NV70 894 aa17.85■□□□□ 0.45
CARMIL3-201ENST00000342740 A0A0D9SFI3 127 aa17.85■□□□□ 0.45
CARMIL3-201ENST00000342740 RRP36Q96EU6 259 aaKnown RBP17.85■□□□□ 0.45
CARMIL3-201ENST00000342740 ZNF830Q96NB3 372 aaPredicted RBP17.85■□□□□ 0.45
CARMIL3-201ENST00000342740 SAMM50Q9Y512 469 aa17.85■□□□□ 0.45
CARMIL3-201ENST00000342740 RPS8P62241 208 aaKnown RBP17.84■□□□□ 0.45
CARMIL3-201ENST00000342740 VPS36Q86VN1 386 aa17.84■□□□□ 0.45
CARMIL3-201ENST00000342740 LRRC24Q50LG9 513 aa17.84■□□□□ 0.45
CARMIL3-201ENST00000342740 GGA1Q9UJY5 639 aa17.84■□□□□ 0.45
CARMIL3-201ENST00000342740 WDR66Q8TBY9 1149 aa17.84■□□□□ 0.45
CARMIL3-201ENST00000342740 LMOD1P29536 600 aaPredicted RBP17.84■□□□□ 0.45
CARMIL3-201ENST00000342740 PTH1RQ03431 593 aa17.84■□□□□ 0.45
CARMIL3-201ENST00000342740 DSCC1Q9BVC3 393 aa17.84■□□□□ 0.45
CARMIL3-201ENST00000342740 VEZTQ9HBM0 779 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms