RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ZNF827Q17R98 1081 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 ERO1AQ96HE7 468 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 CALCOCO1Q9P1Z2 691 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 PCDHA7Q9UN72 937 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 TET3O43151 1660 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 ARHGEF10O15013 1369 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 IBSPP21815 317 aaPredicted RBP14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 LRRC24Q50LG9 513 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 IQSEC2Q5JU85 1478 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 EFCAB6Q5THR3 1501 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 ADAMTS2O95450 1211 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 SPHKAPQ2M3C7 1700 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 MYL5Q02045 173 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 CCDC181Q5TID7 509 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 TIGD1Q96MW7 591 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 CLIC4Q9Y696 253 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 TAF6LQ9Y6J9 622 aa14.26□□□□□ -0.13
SNRNP48-201ENST00000342415 ATP5JP18859 108 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 ZAP70P43403 619 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 NLRP5P59047 1200 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 PNOCQ13519 176 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 WTAPQ15007 396 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 BBXQ8WY36 941 aaPredicted RBP14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 CDK5RAP3Q96JB5 506 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 DRC1Q96MC2 740 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 PLIN2Q99541 437 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 CEP131Q9UPN4 1083 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 ZCCHC11Q5TAX3 1644 aaKnown RBP14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 EYA2O00167 538 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 IGHMBP2P38935 993 aaKnown RBP14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 ADKP55263 362 aaKnown RBP14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 DPCR1Q3MIW9 517 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 TTC14Q96N46 770 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 RNF17Q9BXT8 1623 aaKnown RBP14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 CCDC196A0A1B0GTZ2 297 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 GPAA1O43292 621 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 EPS15P42566 896 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 TMX4Q9H1E5 349 aaPredicted RBP14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 KCNJ14Q9UNX9 436 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 TBX22Q9Y458 520 aa14.25□□□□□ -0.13
SNRNP48-201ENST00000342415 HOXB7P09629 217 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 HSPD1P10809 573 aaKnown RBP14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 CCT6AP40227 531 aaKnown RBP14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 STIM1Q13586 685 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 LONRF3Q496Y0 759 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 TTLL7Q6ZT98 887 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 CLIC6Q96NY7 704 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 KIAA1468Q9P260 1216 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 POLR2DO15514 142 aaKnown RBP14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 EPHA10Q5JZY3 1008 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 PGBD1Q96JS3 809 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 DESI2Q9BSY9 194 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 TSPYL1Q9H0U9 437 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 GNL3LQ9NVN8 582 aaKnown RBP14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 MTX1Q13505 466 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 POLA2Q14181 598 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 RTN1Q16799 776 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 XAGE2Q96GT9 111 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 CRACR2AQ9BSW2 395 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 PUS3Q9BZE2 481 aaKnown RBP14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 CABP5Q9NP86 173 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 JAG2Q9Y219 1238 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 SLC4A4Q9Y6R1 1079 aa14.24□□□□□ -0.13
SNRNP48-201ENST00000342415 ZNF569Q5MCW4 686 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 TAF3Q5VWG9 929 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 PI16Q6UXB8 463 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 BAG1Q99933 345 aaPredicted RBP14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 CCDC144BQ3MJ40 725 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 MYSM1Q5VVJ2 828 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 RRAGBQ5VZM2 374 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 CTCFLQ8NI51 663 aaPredicted RBP14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 PRDM1O75626 825 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 ZFYP08048 801 aaPredicted RBP14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 USP5P45974 858 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 IQCA1Q86XH1 822 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 MAGEB6Q8N7X4 407 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 KCNH3Q9ULD8 1083 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 GLI2P10070 1586 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 FKBP15Q5T1M5 1219 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 VAT1LQ9HCJ6 419 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 ATP10DQ9P241 1426 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 NFE2L3Q9Y4A8 694 aa14.23□□□□□ -0.13
SNRNP48-201ENST00000342415 MED14O60244 1454 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 NCOA3Q9Y6Q9 1424 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 VGLL3A8MV65 326 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 HSPA2P54652 639 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 PPARDQ03181 441 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 KRT40Q6A162 431 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 ZCRB1Q8TBF4 217 aaKnown RBP14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 AIFM3Q96NN9 605 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 BABAM1Q9NWV8 329 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 PFKFB1P16118 471 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 CAPZA3Q96KX2 299 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 SLC52A2Q9HAB3 445 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 HELLSQ9NRZ9 838 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 COBLO75128 1261 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 PDIA3P30101 505 aaKnown RBP14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 TOB2Q14106 344 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms