RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 CSF1RP07333 972 aa13.88□□□□□ -0.19
C2orf88-201ENST00000340623 APPBP2Q92624 585 aa13.88□□□□□ -0.19
C2orf88-201ENST00000340623 LRRC2Q9BYS8 371 aa13.88□□□□□ -0.19
C2orf88-201ENST00000340623 ARMT1Q9H993 441 aa13.88□□□□□ -0.19
C2orf88-201ENST00000340623 RRAGDQ9NQL2 400 aaPredicted RBP13.88□□□□□ -0.19
C2orf88-201ENST00000340623 RGPD1P0DJD0 1748 aa13.88□□□□□ -0.19
C2orf88-201ENST00000340623 ZNF532Q9HCE3 1301 aa13.88□□□□□ -0.19
C2orf88-201ENST00000340623 ZNF827Q17R98 1081 aa13.88□□□□□ -0.19
C2orf88-201ENST00000340623 ATG9AQ7Z3C6 839 aa13.88□□□□□ -0.19
C2orf88-201ENST00000340623 WDR66Q8TBY9 1149 aa13.88□□□□□ -0.19
C2orf88-201ENST00000340623 MASTLQ96GX5 879 aa13.88□□□□□ -0.19
C2orf88-201ENST00000340623 A0A0D9SFI3 127 aa13.87□□□□□ -0.19
C2orf88-201ENST00000340623 ONECUT3O60422 494 aaPredicted RBP13.87□□□□□ -0.19
C2orf88-201ENST00000340623 BRIP1Q9BX63 1249 aa13.87□□□□□ -0.19
C2orf88-201ENST00000340623 OSBPL3Q9H4L5 887 aa13.87□□□□□ -0.19
C2orf88-201ENST00000340623 FAM208AQ9UK61 1670 aaKnown RBP13.87□□□□□ -0.19
C2orf88-201ENST00000340623 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.87□□□□□ -0.19
C2orf88-201ENST00000340623 GPAA1O43292 621 aa13.87□□□□□ -0.19
C2orf88-201ENST00000340623 HSP90AA2PQ14568 343 aaPredicted RBP13.87□□□□□ -0.19
C2orf88-201ENST00000340623 MFSD14BQ5SR56 506 aa13.87□□□□□ -0.19
C2orf88-201ENST00000340623 C21orf2O43822 256 aa13.87□□□□□ -0.19
C2orf88-201ENST00000340623 ANKRD1Q15327 319 aa13.87□□□□□ -0.19
C2orf88-201ENST00000340623 LEMD3Q9Y2U8 911 aa13.87□□□□□ -0.19
C2orf88-201ENST00000340623 CCDC69A6NI79 296 aa13.87□□□□□ -0.19
C2orf88-201ENST00000340623 IKQ13123 557 aaPredicted RBP13.87□□□□□ -0.19
C2orf88-201ENST00000340623 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
C2orf88-201ENST00000340623 USP26Q9BXU7 913 aa13.87□□□□□ -0.19
C2orf88-201ENST00000340623 RIPOR2Q9Y4F9 1068 aa13.87□□□□□ -0.19
C2orf88-201ENST00000340623 GJA3Q9Y6H8 435 aa13.87□□□□□ -0.19
C2orf88-201ENST00000340623 MPHOSPH10O00566 681 aaKnown RBP13.86□□□□□ -0.19
C2orf88-201ENST00000340623 TRAK2O60296 914 aa13.86□□□□□ -0.19
C2orf88-201ENST00000340623 RFX5P48382 616 aaPredicted RBP13.86□□□□□ -0.19
C2orf88-201ENST00000340623 PI4K2BQ8TCG2 481 aa13.86□□□□□ -0.19
C2orf88-201ENST00000340623 NEK1Q96PY6 1258 aa13.86□□□□□ -0.19
C2orf88-201ENST00000340623 TRIM29Q14134 588 aa13.86□□□□□ -0.19
C2orf88-201ENST00000340623 LRP10Q7Z4F1 713 aa13.86□□□□□ -0.19
C2orf88-201ENST00000340623 DBNDD1Q9H9R9 158 aa13.86□□□□□ -0.19
C2orf88-201ENST00000340623 AATFQ9NY61 560 aaKnown RBP eCLIP13.86□□□□□ -0.19
C2orf88-201ENST00000340623 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.86□□□□□ -0.19
C2orf88-201ENST00000340623 RAB11FIP4Q86YS3 637 aa13.86□□□□□ -0.19
C2orf88-201ENST00000340623 MRC1P22897 1456 aa13.86□□□□□ -0.19
C2orf88-201ENST00000340623 TTLL6Q8N841 843 aa13.85□□□□□ -0.19
C2orf88-201ENST00000340623 HELLSQ9NRZ9 838 aa13.85□□□□□ -0.19
C2orf88-201ENST00000340623 MCM9Q9NXL9 1143 aa13.85□□□□□ -0.19
C2orf88-201ENST00000340623 PDE6AP16499 860 aa13.85□□□□□ -0.19
C2orf88-201ENST00000340623 CREB3L3Q68CJ9 461 aa13.85□□□□□ -0.19
C2orf88-201ENST00000340623 HMG20BQ9P0W2 317 aa13.85□□□□□ -0.19
C2orf88-201ENST00000340623 RAD50Q92878 1312 aa13.85□□□□□ -0.19
C2orf88-201ENST00000340623 CPA1P15085 419 aa13.85□□□□□ -0.19
C2orf88-201ENST00000340623 RASGRF1Q13972 1273 aa13.85□□□□□ -0.19
C2orf88-201ENST00000340623 MFSD6Q6ZSS7 791 aa13.85□□□□□ -0.19
C2orf88-201ENST00000340623 CHST3Q7LGC8 479 aa13.85□□□□□ -0.19
C2orf88-201ENST00000340623 CCDC83Q8IWF9 413 aa13.85□□□□□ -0.19
C2orf88-201ENST00000340623 ZNF444Q8N0Y2 327 aaPredicted RBP13.85□□□□□ -0.19
C2orf88-201ENST00000340623 CASP7P55210 303 aa13.84□□□□□ -0.19
C2orf88-201ENST00000340623 TTLL5Q6EMB2 1281 aa13.84□□□□□ -0.19
C2orf88-201ENST00000340623 RNF41Q9H4P4 317 aaPredicted RBP13.84□□□□□ -0.19
C2orf88-201ENST00000340623 HDAC9Q9UKV0 1011 aa13.84□□□□□ -0.19
C2orf88-201ENST00000340623 IFIT3O14879 490 aaKnown RBP13.84□□□□□ -0.19
C2orf88-201ENST00000340623 PPFIA3O75145 1194 aa13.84□□□□□ -0.19
C2orf88-201ENST00000340623 C3orf67Q6ZVT6 689 aa13.84□□□□□ -0.19
C2orf88-201ENST00000340623 SUPT20HQ8NEM7 779 aa13.84□□□□□ -0.19
C2orf88-201ENST00000340623 VEZTQ9HBM0 779 aa13.84□□□□□ -0.19
C2orf88-201ENST00000340623 DNTTIP2Q5QJE6 756 aaKnown RBP13.84□□□□□ -0.19
C2orf88-201ENST00000340623 KIAA0825Q8IV33 1275 aa13.84□□□□□ -0.19
C2orf88-201ENST00000340623 PIBF1Q8WXW3 757 aa13.84□□□□□ -0.19
C2orf88-201ENST00000340623 DDX11Q96FC9 970 aa13.84□□□□□ -0.19
C2orf88-201ENST00000340623 A0A0G2JLW4 131 aa13.83□□□□□ -0.19
C2orf88-201ENST00000340623 MCAMP43121 646 aa13.83□□□□□ -0.19
C2orf88-201ENST00000340623 TMC4Q7Z404 712 aa13.83□□□□□ -0.19
C2orf88-201ENST00000340623 NIM1KQ8IY84 436 aa13.83□□□□□ -0.19
C2orf88-201ENST00000340623 ZRSR1Q15695 479 aaKnown RBP13.83□□□□□ -0.2
C2orf88-201ENST00000340623 SLFNL1Q499Z3 407 aa13.83□□□□□ -0.2
C2orf88-201ENST00000340623 TEX11Q8IYF3 940 aa13.83□□□□□ -0.2
C2orf88-201ENST00000340623 CCDC82Q8N4S0 544 aa13.83□□□□□ -0.2
C2orf88-201ENST00000340623 BCL2L12Q9HB09 334 aa13.83□□□□□ -0.2
C2orf88-201ENST00000340623 TSPY2A6NKD2 308 aa13.83□□□□□ -0.2
C2orf88-201ENST00000340623 IQCA1Q86XH1 822 aa13.83□□□□□ -0.2
C2orf88-201ENST00000340623 NCOA7Q8NI08 942 aa13.83□□□□□ -0.2
C2orf88-201ENST00000340623 TTF2Q9UNY4 1162 aaKnown RBP13.83□□□□□ -0.2
C2orf88-201ENST00000340623 SF3A1Q15459 793 aaKnown RBP13.82□□□□□ -0.2
C2orf88-201ENST00000340623 ARHGAP27Q6ZUM4 889 aa13.82□□□□□ -0.2
C2orf88-201ENST00000340623 ZNF287Q9HBT7 754 aa13.82□□□□□ -0.2
C2orf88-201ENST00000340623 SCNN1DP51172 638 aa13.82□□□□□ -0.2
C2orf88-201ENST00000340623 BRF1Q92994 677 aa13.82□□□□□ -0.2
C2orf88-201ENST00000340623 DDX11L8A8MPP1 907 aa13.82□□□□□ -0.2
C2orf88-201ENST00000340623 HMGB1P09429 215 aaKnown RBP13.82□□□□□ -0.2
C2orf88-201ENST00000340623 CCT2P78371 535 aaKnown RBP13.82□□□□□ -0.2
C2orf88-201ENST00000340623 SCARF1Q14162 830 aa13.82□□□□□ -0.2
C2orf88-201ENST00000340623 SAP30BPQ9UHR5 308 aaKnown RBP13.82□□□□□ -0.2
C2orf88-201ENST00000340623 CTDP1Q9Y5B0 961 aaPredicted RBP13.82□□□□□ -0.2
C2orf88-201ENST00000340623 PTH1RQ03431 593 aa13.81□□□□□ -0.2
C2orf88-201ENST00000340623 DDR1Q08345 913 aa13.81□□□□□ -0.2
C2orf88-201ENST00000340623 ABCC12Q96J65 1359 aa13.81□□□□□ -0.2
C2orf88-201ENST00000340623 MYO1BO43795 1136 aa13.81□□□□□ -0.2
C2orf88-201ENST00000340623 DTNBO60941 627 aa13.81□□□□□ -0.2
C2orf88-201ENST00000340623 GNAT2P19087 354 aa13.81□□□□□ -0.2
C2orf88-201ENST00000340623 NUCB2P80303 420 aa13.81□□□□□ -0.2
C2orf88-201ENST00000340623 GPSM2P81274 684 aa13.81□□□□□ -0.2
C2orf88-201ENST00000340623 PDE4BQ07343 736 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms