RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 EYA2O00167 538 aa19.23■□□□□ 0.67
VAPA-201ENST00000340541 MTX1Q13505 466 aa19.23■□□□□ 0.67
VAPA-201ENST00000340541 UBE4AQ14139 1066 aa19.23■□□□□ 0.67
VAPA-201ENST00000340541 DACT2Q5SW24 774 aa19.23■□□□□ 0.67
VAPA-201ENST00000340541 ATG9AQ7Z3C6 839 aa19.23■□□□□ 0.67
VAPA-201ENST00000340541 CD209Q9NNX6 404 aa19.23■□□□□ 0.67
VAPA-201ENST00000340541 USP17L8P0C7I0 530 aa19.22■□□□□ 0.67
VAPA-201ENST00000340541 STRIP1Q5VSL9 837 aa19.22■□□□□ 0.67
VAPA-201ENST00000340541 GGA3Q9NZ52 723 aa19.22■□□□□ 0.67
VAPA-201ENST00000340541 RCAN3Q9UKA8 241 aa19.22■□□□□ 0.67
VAPA-201ENST00000340541 PITPNM2Q9BZ72 1349 aa19.22■□□□□ 0.67
VAPA-201ENST00000340541 FAM155AB1AL88 458 aaPredicted RBP19.21■□□□□ 0.67
VAPA-201ENST00000340541 ADM5C9JUS6 153 aa19.21■□□□□ 0.67
VAPA-201ENST00000340541 PDE8BO95263 885 aa19.21■□□□□ 0.67
VAPA-201ENST00000340541 GNAI2P04899 355 aa19.21■□□□□ 0.67
VAPA-201ENST00000340541 IL1R1P14778 569 aa19.21■□□□□ 0.67
VAPA-201ENST00000340541 FKBP1BP68106 108 aa19.21■□□□□ 0.67
VAPA-201ENST00000340541 SCARF1Q14162 830 aa19.21■□□□□ 0.67
VAPA-201ENST00000340541 METTL24Q5JXM2 366 aa19.21■□□□□ 0.67
VAPA-201ENST00000340541 FTSJ3Q8IY81 847 aaKnown RBP19.21■□□□□ 0.67
VAPA-201ENST00000340541 REM2Q8IYK8 340 aaPredicted RBP19.21■□□□□ 0.67
VAPA-201ENST00000340541 MXD3Q9BW11 206 aa19.21■□□□□ 0.67
VAPA-201ENST00000340541 MYOZ2Q9NPC6 264 aa19.21■□□□□ 0.67
VAPA-201ENST00000340541 COPRSQ9NQ92 184 aa19.21■□□□□ 0.67
VAPA-201ENST00000340541 CIAO1O76071 339 aa19.2■□□□□ 0.66
VAPA-201ENST00000340541 ZNF157P51786 506 aaPredicted RBP19.2■□□□□ 0.66
VAPA-201ENST00000340541 DLK2Q6UY11 383 aa19.2■□□□□ 0.66
VAPA-201ENST00000340541 SAGE1Q9NXZ1 904 aa19.2■□□□□ 0.66
VAPA-201ENST00000340541 FBXO3Q9UK99 471 aa19.2■□□□□ 0.66
VAPA-201ENST00000340541 PA2G4Q9UQ80 394 aaKnown RBP19.2■□□□□ 0.66
VAPA-201ENST00000340541 ZBTB7BO15156 539 aaPredicted RBP19.19■□□□□ 0.66
VAPA-201ENST00000340541 FGFR2P21802 821 aa19.19■□□□□ 0.66
VAPA-201ENST00000340541 ZNF804AQ7Z570 1209 aa19.19■□□□□ 0.66
VAPA-201ENST00000340541 PANK1Q8TE04 598 aa19.19■□□□□ 0.66
VAPA-201ENST00000340541 FAM84BQ96KN1 310 aaPredicted RBP19.19■□□□□ 0.66
VAPA-201ENST00000340541 SIL1Q9H173 461 aa19.19■□□□□ 0.66
VAPA-201ENST00000340541 TSKSQ9UJT2 592 aa19.19■□□□□ 0.66
VAPA-201ENST00000340541 MYO3BQ8WXR4 1341 aa19.19■□□□□ 0.66
VAPA-201ENST00000340541 SRGAP3O43295 1099 aa19.18■□□□□ 0.66
VAPA-201ENST00000340541 GYG1P46976 350 aa19.18■□□□□ 0.66
VAPA-201ENST00000340541 GTF2IP78347 998 aa19.18■□□□□ 0.66
VAPA-201ENST00000340541 ANGEL2Q5VTE6 544 aaKnown RBP19.18■□□□□ 0.66
VAPA-201ENST00000340541 TTLL5Q6EMB2 1281 aa19.18■□□□□ 0.66
VAPA-201ENST00000340541 ITPRIPQ8IWB1 547 aa19.18■□□□□ 0.66
VAPA-201ENST00000340541 OGFOD1Q8N543 542 aa19.18■□□□□ 0.66
VAPA-201ENST00000340541 CDCA5Q96FF9 252 aa19.18■□□□□ 0.66
VAPA-201ENST00000340541 PNMA6EA0A0J9YXQ4 647 aa19.17■□□□□ 0.66
VAPA-201ENST00000340541 FBXO33Q7Z6M2 555 aa19.17■□□□□ 0.66
VAPA-201ENST00000340541 CERS5Q8N5B7 392 aa19.17■□□□□ 0.66
VAPA-201ENST00000340541 TDRD7Q8NHU6 1098 aaKnown RBP19.17■□□□□ 0.66
VAPA-201ENST00000340541 ZIC5Q96T25 663 aa19.17■□□□□ 0.66
VAPA-201ENST00000340541 SLC10A3P09131 477 aa19.16■□□□□ 0.66
VAPA-201ENST00000340541 HIBADHP31937 336 aaKnown RBP19.16■□□□□ 0.66
VAPA-201ENST00000340541 RGS19P49795 217 aa19.16■□□□□ 0.66
VAPA-201ENST00000340541 KIF23Q02241 960 aaPredicted RBP19.16■□□□□ 0.66
VAPA-201ENST00000340541 PUM3Q15397 648 aaKnown RBP19.16■□□□□ 0.66
VAPA-201ENST00000340541 FBXW7Q969H0 707 aa19.16■□□□□ 0.66
VAPA-201ENST00000340541 ASTN2O75129 1339 aaPredicted RBP19.16■□□□□ 0.66
VAPA-201ENST00000340541 IL15P40933 162 aaPredicted RBP19.15■□□□□ 0.66
VAPA-201ENST00000340541 C1orf115Q9H7X2 142 aa19.15■□□□□ 0.66
VAPA-201ENST00000340541 FAM205AQ6ZU69 1335 aa19.15■□□□□ 0.66
VAPA-201ENST00000340541 CCDC85CA6NKD9 419 aa19.14■□□□□ 0.65
VAPA-201ENST00000340541 SASH1O94885 1247 aa19.14■□□□□ 0.65
VAPA-201ENST00000340541 POLA2Q14181 598 aa19.14■□□□□ 0.65
VAPA-201ENST00000340541 MCOLN1Q9GZU1 580 aa19.14■□□□□ 0.65
VAPA-201ENST00000340541 CASP8AP2Q9UKL3 1982 aa19.13■□□□□ 0.65
VAPA-201ENST00000340541 MS4A1P11836 297 aa19.13■□□□□ 0.65
VAPA-201ENST00000340541 FKBP1AP62942 108 aaKnown RBP19.13■□□□□ 0.65
VAPA-201ENST00000340541 LPIN2Q92539 896 aa19.13■□□□□ 0.65
VAPA-201ENST00000340541 YTHDC1Q96MU7 727 aaKnown RBP19.13■□□□□ 0.65
VAPA-201ENST00000340541 CSRNP1Q96S65 589 aa19.13■□□□□ 0.65
VAPA-201ENST00000340541 RNF186Q9NXI6 227 aa19.13■□□□□ 0.65
VAPA-201ENST00000340541 CEP126Q9P2H0 1117 aa19.13■□□□□ 0.65
VAPA-201ENST00000340541 JAG2Q9Y219 1238 aa19.13■□□□□ 0.65
VAPA-201ENST00000340541 ARAP2Q8WZ64 1704 aa19.12■□□□□ 0.65
VAPA-201ENST00000340541 IFIT1P09914 478 aaKnown RBP19.12■□□□□ 0.65
VAPA-201ENST00000340541 BCAMP50895 628 aa19.12■□□□□ 0.65
VAPA-201ENST00000340541 ATP8B2P98198 1209 aa19.12■□□□□ 0.65
VAPA-201ENST00000340541 MVPQ14764 893 aaKnown RBP19.12■□□□□ 0.65
VAPA-201ENST00000340541 KIAA0825Q8IV33 1275 aa19.12■□□□□ 0.65
VAPA-201ENST00000340541 SSH3Q8TE77 659 aa19.12■□□□□ 0.65
VAPA-201ENST00000340541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.12■□□□□ 0.65
VAPA-201ENST00000340541 WNT10BO00744 389 aa19.11■□□□□ 0.65
VAPA-201ENST00000340541 SLC5A1P13866 664 aa19.11■□□□□ 0.65
VAPA-201ENST00000340541 DGKZQ13574 1117 aa19.11■□□□□ 0.65
VAPA-201ENST00000340541 ATP2B3Q16720 1220 aa19.11■□□□□ 0.65
VAPA-201ENST00000340541 NBPF9Q3BBW0 867 aa19.11■□□□□ 0.65
VAPA-201ENST00000340541 CAVIN4Q5BKX8 364 aa19.11■□□□□ 0.65
VAPA-201ENST00000340541 HDAC9Q9UKV0 1011 aa19.11■□□□□ 0.65
VAPA-201ENST00000340541 IQSEC3Q9UPP2 1182 aaPredicted RBP19.11■□□□□ 0.65
VAPA-201ENST00000340541 COG6Q9Y2V7 657 aa19.11■□□□□ 0.65
VAPA-201ENST00000340541 PAPPA2Q9BXP8 1791 aa19.11■□□□□ 0.65
VAPA-201ENST00000340541 AKAP11Q9UKA4 1901 aa19.1■□□□□ 0.65
VAPA-201ENST00000340541 TRPA1O75762 1119 aa19.1■□□□□ 0.65
VAPA-201ENST00000340541 NF2P35240 595 aa19.1■□□□□ 0.65
VAPA-201ENST00000340541 C20orf194Q5TEA3 1177 aa19.1■□□□□ 0.65
VAPA-201ENST00000340541 RASAL3Q86YV0 1011 aa19.1■□□□□ 0.65
VAPA-201ENST00000340541 ZBED3Q96IU2 234 aaPredicted RBP19.1■□□□□ 0.65
VAPA-201ENST00000340541 TFCP2Q12800 502 aa19.09■□□□□ 0.65
VAPA-201ENST00000340541 VPS37DQ86XT2 251 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms