RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 IRS2Q9Y4H2 1338 aa17.59■□□□□ 0.41
UPK3BL1-201ENST00000340457 MMP14P50281 582 aa17.59■□□□□ 0.41
UPK3BL1-201ENST00000340457 PRPF38BQ5VTL8 546 aaKnown RBP17.59■□□□□ 0.41
UPK3BL1-201ENST00000340457 LINS1Q8NG48 757 aa17.59■□□□□ 0.41
UPK3BL1-201ENST00000340457 SALL2Q9Y467 1007 aaPredicted RBP17.59■□□□□ 0.41
UPK3BL1-201ENST00000340457 SSC5DA1L4H1 1573 aa17.58■□□□□ 0.41
UPK3BL1-201ENST00000340457 F6X3S4 739 aa17.58■□□□□ 0.4
UPK3BL1-201ENST00000340457 PLIN1O60240 522 aa17.58■□□□□ 0.4
UPK3BL1-201ENST00000340457 CFAP100Q494V2 611 aa17.58■□□□□ 0.4
UPK3BL1-201ENST00000340457 NOM1Q5C9Z4 860 aaKnown RBP17.58■□□□□ 0.4
UPK3BL1-201ENST00000340457 VEZTQ9HBM0 779 aa17.58■□□□□ 0.4
UPK3BL1-201ENST00000340457 FOXO4P98177 505 aa17.57■□□□□ 0.4
UPK3BL1-201ENST00000340457 IFIT5Q13325 482 aaKnown RBP17.57■□□□□ 0.4
UPK3BL1-201ENST00000340457 CCDC27Q2M243 656 aa17.57■□□□□ 0.4
UPK3BL1-201ENST00000340457 IFNL1Q8IU54 200 aa17.57■□□□□ 0.4
UPK3BL1-201ENST00000340457 ZNF594Q96JF6 807 aaPredicted RBP17.57■□□□□ 0.4
UPK3BL1-201ENST00000340457 PRMT6Q96LA8 375 aaPredicted RBP17.57■□□□□ 0.4
UPK3BL1-201ENST00000340457 FANCIQ9NVI1 1328 aa17.57■□□□□ 0.4
UPK3BL1-201ENST00000340457 IGF2BP3O00425 579 aaKnown RBP eCLIP17.56■□□□□ 0.4
UPK3BL1-201ENST00000340457 RBM5P52756 815 aaKnown RBP eCLIP17.56■□□□□ 0.4
UPK3BL1-201ENST00000340457 EPHA10Q5JZY3 1008 aa17.56■□□□□ 0.4
UPK3BL1-201ENST00000340457 NBPF12Q5TAG4 269 aaPredicted RBP17.56■□□□□ 0.4
UPK3BL1-201ENST00000340457 WNK4Q96J92 1243 aa17.56■□□□□ 0.4
UPK3BL1-201ENST00000340457 CFHR5Q9BXR6 569 aa17.56■□□□□ 0.4
UPK3BL1-201ENST00000340457 TRIM17Q9Y577 477 aa17.56■□□□□ 0.4
UPK3BL1-201ENST00000340457 KIAA0100Q14667 2235 aaKnown RBP17.56■□□□□ 0.4
UPK3BL1-201ENST00000340457 SPDYE2BA6NHP3 402 aa17.55■□□□□ 0.4
UPK3BL1-201ENST00000340457 MANSC4A6NHS7 340 aaPredicted RBP17.55■□□□□ 0.4
UPK3BL1-201ENST00000340457 PPP1R12BO60237 982 aaPredicted RBP17.55■□□□□ 0.4
UPK3BL1-201ENST00000340457 SPDYE6P0CI01 402 aa17.55■□□□□ 0.4
UPK3BL1-201ENST00000340457 LMBR1LQ6UX01 489 aa17.55■□□□□ 0.4
UPK3BL1-201ENST00000340457 ZNF804AQ7Z570 1209 aa17.55■□□□□ 0.4
UPK3BL1-201ENST00000340457 MTMR14Q8NCE2 650 aa17.55■□□□□ 0.4
UPK3BL1-201ENST00000340457 A0A1B0GUL6 1792 aa17.55■□□□□ 0.4
UPK3BL1-201ENST00000340457 COL1A1P02452 1464 aaPredicted RBP17.54■□□□□ 0.4
UPK3BL1-201ENST00000340457 VAMP4O75379 141 aa17.54■□□□□ 0.4
UPK3BL1-201ENST00000340457 ALDH1A1P00352 501 aa17.54■□□□□ 0.4
UPK3BL1-201ENST00000340457 IL1R1P14778 569 aa17.54■□□□□ 0.4
UPK3BL1-201ENST00000340457 GJA5P36382 358 aa17.54■□□□□ 0.4
UPK3BL1-201ENST00000340457 EXOSC9Q06265 439 aaKnown RBP17.54■□□□□ 0.4
UPK3BL1-201ENST00000340457 MAP3K11Q16584 847 aa17.54■□□□□ 0.4
UPK3BL1-201ENST00000340457 C15orf52Q6ZUT6 534 aaKnown RBP17.54■□□□□ 0.4
UPK3BL1-201ENST00000340457 PCDH10Q9P2E7 1040 aa17.54■□□□□ 0.4
UPK3BL1-201ENST00000340457 IL16Q14005 1332 aa17.54■□□□□ 0.4
UPK3BL1-201ENST00000340457 ECM29Q5VYK3 1845 aa17.53■□□□□ 0.4
UPK3BL1-201ENST00000340457 MYO1BO43795 1136 aa17.53■□□□□ 0.4
UPK3BL1-201ENST00000340457 SUPT20HL1Q3ZLR7 823 aa17.53■□□□□ 0.4
UPK3BL1-201ENST00000340457 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
UPK3BL1-201ENST00000340457 BEND3Q5T5X7 828 aa17.53■□□□□ 0.4
UPK3BL1-201ENST00000340457 OTOP1Q7RTM1 612 aa17.53■□□□□ 0.4
UPK3BL1-201ENST00000340457 CACNA1FO60840 1977 aa17.52■□□□□ 0.4
UPK3BL1-201ENST00000340457 USP2O75604 605 aaPredicted RBP17.52■□□□□ 0.4
UPK3BL1-201ENST00000340457 ZBTB48P10074 688 aaPredicted RBP17.52■□□□□ 0.4
UPK3BL1-201ENST00000340457 INHBEP58166 350 aa17.52■□□□□ 0.4
UPK3BL1-201ENST00000340457 RASA3Q14644 834 aa17.52■□□□□ 0.4
UPK3BL1-201ENST00000340457 LDHAL6AQ6ZMR3 332 aa17.52■□□□□ 0.4
UPK3BL1-201ENST00000340457 PPP2R3BQ9Y5P8 575 aa17.52■□□□□ 0.4
UPK3BL1-201ENST00000340457 POTEFA5A3E0 1075 aa17.51■□□□□ 0.39
UPK3BL1-201ENST00000340457 IREB2P48200 963 aaKnown RBP17.51■□□□□ 0.39
UPK3BL1-201ENST00000340457 CRHR2Q13324 411 aa17.51■□□□□ 0.39
UPK3BL1-201ENST00000340457 CCDC57Q2TAC2 916 aa17.51■□□□□ 0.39
UPK3BL1-201ENST00000340457 CDAN1Q8IWY9 1227 aa17.51■□□□□ 0.39
UPK3BL1-201ENST00000340457 CD99L2Q8TCZ2 262 aa17.51■□□□□ 0.39
UPK3BL1-201ENST00000340457 CNNM1Q9NRU3 951 aa17.51■□□□□ 0.39
UPK3BL1-201ENST00000340457 BRCA2P51587 3418 aa17.51■□□□□ 0.39
UPK3BL1-201ENST00000340457 GYG1P46976 350 aa17.5■□□□□ 0.39
UPK3BL1-201ENST00000340457 PTPN18Q99952 460 aa17.5■□□□□ 0.39
UPK3BL1-201ENST00000340457 TDRD3Q9H7E2 651 aaKnown RBP17.5■□□□□ 0.39
UPK3BL1-201ENST00000340457 ELP3Q9H9T3 547 aa17.5■□□□□ 0.39
UPK3BL1-201ENST00000340457 FKBP1AP62942 108 aaKnown RBP17.49■□□□□ 0.39
UPK3BL1-201ENST00000340457 CAP1Q01518 475 aa17.49■□□□□ 0.39
UPK3BL1-201ENST00000340457 MFSD14BQ5SR56 506 aa17.49■□□□□ 0.39
UPK3BL1-201ENST00000340457 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
UPK3BL1-201ENST00000340457 ZNF70Q9UC06 446 aaPredicted RBP17.49■□□□□ 0.39
UPK3BL1-201ENST00000340457 TTF2Q9UNY4 1162 aaKnown RBP17.49■□□□□ 0.39
UPK3BL1-201ENST00000340457 GRM8O00222 908 aa17.48■□□□□ 0.39
UPK3BL1-201ENST00000340457 ANKRD13AQ8IZ07 590 aa17.48■□□□□ 0.39
UPK3BL1-201ENST00000340457 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
UPK3BL1-201ENST00000340457 PUS3Q9BZE2 481 aaKnown RBP17.48■□□□□ 0.39
UPK3BL1-201ENST00000340457 MRS2Q9HD23 443 aa17.48■□□□□ 0.39
UPK3BL1-201ENST00000340457 C9orf78Q9NZ63 289 aaPredicted RBP17.48■□□□□ 0.39
UPK3BL1-201ENST00000340457 TCP10L2B9ZVM9 353 aa17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 SPDYE2Q495Y8 402 aa17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 OTUD7BQ6GQQ9 843 aa17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 SLC4A10Q6U841 1118 aa17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 TDRD7Q8NHU6 1098 aaKnown RBP17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 OPTNQ96CV9 577 aa17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 ERO1AQ96HE7 468 aa17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 IQSEC3Q9UPP2 1182 aaPredicted RBP17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 PTPN22Q9Y2R2 807 aa17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 OTOFQ9HC10 1997 aa17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 FAM205AQ6ZU69 1335 aa17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 HIBADHP31937 336 aaKnown RBP17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 GRIK5Q16478 980 aa17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 WDR63Q8IWG1 891 aa17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 FAM84BQ96KN1 310 aaPredicted RBP17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 TMEM39BQ9GZU3 492 aa17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 EFCC1Q9HA90 598 aa17.47■□□□□ 0.39
UPK3BL1-201ENST00000340457 UNCXA6NJT0 531 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms