RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 C6orf229H3BNL8 230 aa9.47□□□□□ -0.89
TMC1-202ENST00000340019 IL1R1P14778 569 aa9.47□□□□□ -0.89
TMC1-202ENST00000340019 MAPK8IP2Q13387 824 aaPredicted RBP9.47□□□□□ -0.89
TMC1-202ENST00000340019 ZNF804AQ7Z570 1209 aa9.47□□□□□ -0.89
TMC1-202ENST00000340019 SPON1Q9HCB6 807 aa9.47□□□□□ -0.89
TMC1-202ENST00000340019 GRIPAP1Q4V328 841 aa9.46□□□□□ -0.89
TMC1-202ENST00000340019 RUFY2Q8WXA3 655 aa9.46□□□□□ -0.89
TMC1-202ENST00000340019 TBC1D32Q96NH3 1257 aa9.46□□□□□ -0.89
TMC1-202ENST00000340019 CD209Q9NNX6 404 aa9.46□□□□□ -0.89
TMC1-202ENST00000340019 PIM2Q9P1W9 311 aa9.46□□□□□ -0.89
TMC1-202ENST00000340019 RAD50Q92878 1312 aa9.46□□□□□ -0.9
TMC1-202ENST00000340019 RNF113AO15541 343 aaKnown RBP9.46□□□□□ -0.9
TMC1-202ENST00000340019 C21orf2O43822 256 aa9.46□□□□□ -0.9
TMC1-202ENST00000340019 REC8O95072 547 aa9.46□□□□□ -0.9
TMC1-202ENST00000340019 USP26Q9BXU7 913 aa9.46□□□□□ -0.9
TMC1-202ENST00000340019 UPF2Q9HAU5 1272 aaKnown RBP9.46□□□□□ -0.9
TMC1-202ENST00000340019 UTRNP46939 3433 aa9.46□□□□□ -0.9
TMC1-202ENST00000340019 ZFYP08048 801 aaPredicted RBP9.45□□□□□ -0.9
TMC1-202ENST00000340019 SLFNL1Q499Z3 407 aa9.45□□□□□ -0.9
TMC1-202ENST00000340019 ZMYM1Q5SVZ6 1142 aa9.45□□□□□ -0.9
TMC1-202ENST00000340019 FER1L6Q2WGJ9 1857 aa9.45□□□□□ -0.9
TMC1-202ENST00000340019 SRCAPQ6ZRS2 3230 aa9.45□□□□□ -0.9
TMC1-202ENST00000340019 EPB41L2O43491 1005 aaKnown RBP9.45□□□□□ -0.9
TMC1-202ENST00000340019 ADD2P35612 726 aa9.45□□□□□ -0.9
TMC1-202ENST00000340019 RBM25P49756 843 aaKnown RBP9.45□□□□□ -0.9
TMC1-202ENST00000340019 LRRFIP1Q32MZ4 808 aaKnown RBP9.45□□□□□ -0.9
TMC1-202ENST00000340019 C22orf23Q9BZE7 217 aa9.45□□□□□ -0.9
TMC1-202ENST00000340019 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.45□□□□□ -0.9
TMC1-202ENST00000340019 SALL1Q9NSC2 1324 aa9.45□□□□□ -0.9
TMC1-202ENST00000340019 TCRBV5S4A2TA0A5A2 114 aa9.45□□□□□ -0.9
TMC1-202ENST00000340019 WASHC4Q2M389 1173 aa9.45□□□□□ -0.9
TMC1-202ENST00000340019 CCDC88AQ3V6T2 1871 aa9.45□□□□□ -0.9
TMC1-202ENST00000340019 CCDC93Q567U6 631 aa9.45□□□□□ -0.9
TMC1-202ENST00000340019 ZC3H12CQ9C0D7 883 aaKnown RBP9.45□□□□□ -0.9
TMC1-202ENST00000340019 COA1Q9GZY4 146 aa9.45□□□□□ -0.9
TMC1-202ENST00000340019 HELLSQ9NRZ9 838 aa9.45□□□□□ -0.9
TMC1-202ENST00000340019 ZNF219Q9P2Y4 722 aaPredicted RBP9.45□□□□□ -0.9
TMC1-202ENST00000340019 PPP1R1BQ9UD71 204 aaPredicted RBP9.45□□□□□ -0.9
TMC1-202ENST00000340019 MAST2Q6P0Q8 1798 aa9.44□□□□□ -0.9
TMC1-202ENST00000340019 ZNF646O15015 1829 aaPredicted RBP9.44□□□□□ -0.9
TMC1-202ENST00000340019 ARFGEF1Q9Y6D6 1849 aa9.44□□□□□ -0.9
TMC1-202ENST00000340019 IDH1O75874 414 aaKnown RBP9.44□□□□□ -0.9
TMC1-202ENST00000340019 UBE3CQ15386 1083 aa9.44□□□□□ -0.9
TMC1-202ENST00000340019 MCMDC2Q4G0Z9 681 aa9.44□□□□□ -0.9
TMC1-202ENST00000340019 DALRD3Q5D0E6 543 aaKnown RBP9.44□□□□□ -0.9
TMC1-202ENST00000340019 ZSCAN25Q6NSZ9 544 aa9.44□□□□□ -0.9
TMC1-202ENST00000340019 ZNF589Q86UQ0 364 aaPredicted RBP9.44□□□□□ -0.9
TMC1-202ENST00000340019 RTKN2Q8IZC4 609 aa9.44□□□□□ -0.9
TMC1-202ENST00000340019 SEC62Q99442 399 aaKnown RBP9.44□□□□□ -0.9
TMC1-202ENST00000340019 EYA3Q99504 573 aa9.44□□□□□ -0.9
TMC1-202ENST00000340019 LSG1Q9H089 658 aaKnown RBP9.44□□□□□ -0.9
TMC1-202ENST00000340019 WWC3Q9ULE0 1092 aa9.44□□□□□ -0.9
TMC1-202ENST00000340019 RIMBP2O15034 1052 aa9.44□□□□□ -0.9
TMC1-202ENST00000340019 FRAT2O75474 233 aaPredicted RBP9.44□□□□□ -0.9
TMC1-202ENST00000340019 MAP3K12Q12852 859 aa9.44□□□□□ -0.9
TMC1-202ENST00000340019 SLC9C2Q5TAH2 1124 aa9.44□□□□□ -0.9
TMC1-202ENST00000340019 APPBP2Q92624 585 aa9.44□□□□□ -0.9
TMC1-202ENST00000340019 PSMD1Q99460 953 aa9.44□□□□□ -0.9
TMC1-202ENST00000340019 PDE6AP16499 860 aa9.43□□□□□ -0.9
TMC1-202ENST00000340019 SOGA3Q5TF21 947 aa9.43□□□□□ -0.9
TMC1-202ENST00000340019 NLGN2Q8NFZ4 835 aa9.43□□□□□ -0.9
TMC1-202ENST00000340019 OSBP2Q969R2 916 aa9.43□□□□□ -0.9
TMC1-202ENST00000340019 ANO2Q9NQ90 1003 aa9.43□□□□□ -0.9
TMC1-202ENST00000340019 MAST3O60307 1309 aa9.43□□□□□ -0.9
TMC1-202ENST00000340019 SCN9AQ15858 1988 aa9.43□□□□□ -0.9
TMC1-202ENST00000340019 SUPT20HQ8NEM7 779 aa9.43□□□□□ -0.9
TMC1-202ENST00000340019 WDR66Q8TBY9 1149 aa9.43□□□□□ -0.9
TMC1-202ENST00000340019 LRP2BPQ9P2M1 347 aa9.43□□□□□ -0.9
TMC1-202ENST00000340019 FAM205AQ6ZU69 1335 aa9.43□□□□□ -0.9
TMC1-202ENST00000340019 ZNF532Q9HCE3 1301 aa9.43□□□□□ -0.9
TMC1-202ENST00000340019 M0R2C6 588 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 IGSF3O75054 1194 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 KIAA2012Q0VF49 1180 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 KLHL34Q8N239 644 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 MAGEB6Q8N7X4 407 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 ZNF384Q8TF68 577 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 PUS7LQ9H0K6 701 aaKnown RBP9.42□□□□□ -0.9
TMC1-202ENST00000340019 ABCF2Q9UG63 623 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 CCDC171Q6TFL3 1326 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 PSME4Q14997 1843 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 PTH1RQ03431 593 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 CHAF1AQ13111 956 aaPredicted RBP9.42□□□□□ -0.9
TMC1-202ENST00000340019 CCDC129Q6ZRS4 1044 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 ZGPATQ8N5A5 531 aaKnown RBP9.42□□□□□ -0.9
TMC1-202ENST00000340019 JAG2Q9Y219 1238 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 PRDX5P30044 214 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 DOK7Q18PE1 504 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 KIAA1211Q6ZU35 1233 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 PODNQ7Z5L7 613 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 MAP4K1Q92918 833 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 NSUN4Q96CB9 384 aaKnown RBP9.42□□□□□ -0.9
TMC1-202ENST00000340019 KIF2CQ99661 725 aa9.42□□□□□ -0.9
TMC1-202ENST00000340019 AOC3Q16853 763 aa9.41□□□□□ -0.9
TMC1-202ENST00000340019 TMED8Q6PL24 325 aaPredicted RBP9.41□□□□□ -0.9
TMC1-202ENST00000340019 ERICH6Q7L0X2 663 aa9.41□□□□□ -0.9
TMC1-202ENST00000340019 VPS33BQ9H267 617 aa9.41□□□□□ -0.9
TMC1-202ENST00000340019 COL4A5P29400 1685 aa9.41□□□□□ -0.9
TMC1-202ENST00000340019 HSPA4P34932 840 aa9.41□□□□□ -0.9
TMC1-202ENST00000340019 MECOMQ03112 1051 aa9.41□□□□□ -0.9
TMC1-202ENST00000340019 ADGRA1Q86SQ6 560 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms