RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 GOLGA8FQ08AF8 430 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 GOLGA8DPQ0D2H9 430 aa10.87□□□□□ -0.67
NECAP1-201ENST00000339754 BEND6Q5SZJ8 279 aaPredicted RBP10.87□□□□□ -0.67
NECAP1-201ENST00000339754 MSL3Q8N5Y2 521 aaKnown RBP10.87□□□□□ -0.67
NECAP1-201ENST00000339754 NSUN7Q8NE18 718 aaKnown RBP10.87□□□□□ -0.67
NECAP1-201ENST00000339754 LLPHQ9BRT6 129 aaKnown RBP10.87□□□□□ -0.67
NECAP1-201ENST00000339754 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.87□□□□□ -0.67
NECAP1-201ENST00000339754 A0A1W2PQ27 194 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 A0A1W2PQ64 194 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 A0A1W2PQD8 194 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 TAF7Q15545 349 aaPredicted RBP10.86□□□□□ -0.67
NECAP1-201ENST00000339754 GOLGA1Q92805 767 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 DRC1Q96MC2 740 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 NEK1Q96PY6 1258 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 TOMM22Q9NS69 142 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 ACEP12821 1306 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 AKAP12Q02952 1782 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 BIN1O00499 593 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 IKBKBO14920 756 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 PFKFB2O60825 505 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 N4BP1O75113 896 aaKnown RBP10.86□□□□□ -0.67
NECAP1-201ENST00000339754 ALDH1L1O75891 902 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 FOSBP53539 338 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 AACSQ86V21 672 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 ERC1Q8IUD2 1116 aa10.86□□□□□ -0.67
NECAP1-201ENST00000339754 ABCC6O95255 1503 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 UBASH3AP57075 661 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 KRT32Q14532 448 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 LRRC31Q6UY01 552 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 VSTM4Q8IW00 320 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 DHX58Q96C10 678 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 ANKZF1Q9H8Y5 726 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 RTEL1Q9NZ71 1219 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 PA2G4Q9UQ80 394 aaKnown RBP10.85□□□□□ -0.67
NECAP1-201ENST00000339754 ARHGAP6O43182 974 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 USP5P45974 858 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 MCM6Q14566 821 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 HDGFL1Q5TGJ6 251 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 PPM1EQ8WY54 764 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 EAF2Q96CJ1 260 aaPredicted RBP10.85□□□□□ -0.67
NECAP1-201ENST00000339754 SIL1Q9H173 461 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 MKRN1Q9UHC7 482 aaKnown RBP10.85□□□□□ -0.67
NECAP1-201ENST00000339754 L1RE1Q9UN81 338 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 AKAP2Q9Y2D5 859 aa10.85□□□□□ -0.67
NECAP1-201ENST00000339754 KDRP35968 1356 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 SLC3A2P08195 630 aaKnown RBP10.84□□□□□ -0.67
NECAP1-201ENST00000339754 HSP90B1P14625 803 aaKnown RBP10.84□□□□□ -0.67
NECAP1-201ENST00000339754 ZRSR1Q15695 479 aaKnown RBP10.84□□□□□ -0.67
NECAP1-201ENST00000339754 HDXQ7Z353 690 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 SUGP1Q8IWZ8 645 aaKnown RBP10.84□□□□□ -0.67
NECAP1-201ENST00000339754 IL17REQ8NFR9 667 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 RAB21Q9UL25 225 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 FAN1Q9Y2M0 1017 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 LRRC37A3O60309 1634 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 COL15A1P39059 1388 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 TMEM232C9JQI7 657 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 CPP00450 1065 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 LINC00301Q8NCQ3 95 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 DNAAF4Q8WXU2 420 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 SEC62Q99442 399 aaKnown RBP10.84□□□□□ -0.67
NECAP1-201ENST00000339754 FSD1Q9BTV5 496 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 LRRC2Q9BYS8 371 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 CEP170BQ9Y4F5 1589 aaPredicted RBP10.84□□□□□ -0.67
NECAP1-201ENST00000339754 OVOS2A0A0J9YW53 1432 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 OVOS2Q6IE36 1432 aa10.84□□□□□ -0.67
NECAP1-201ENST00000339754 PTPDC1A2A3K4 754 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 PI4KAP2A4QPH2 592 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 GOLGA6L9A6NEM1 432 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 ANKRD65E5RJM6 399 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 SASH1O94885 1247 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 KCNA6P17658 529 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 SART3Q15020 963 aaKnown RBP10.83□□□□□ -0.68
NECAP1-201ENST00000339754 PTPN21Q16825 1174 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 PI4KAP1Q8N8J0 262 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 CCDC8Q9H0W5 538 aaPredicted RBP10.83□□□□□ -0.68
NECAP1-201ENST00000339754 BOLA2Q9H3K6 86 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 PLEKHG3A1L390 1219 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 GNAT3A8MTJ3 354 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 CBFA2T2O43439 604 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 ZNF202O95125 648 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 TBX2Q13207 712 aaPredicted RBP10.83□□□□□ -0.68
NECAP1-201ENST00000339754 SWT1Q5T5J6 900 aaKnown RBP10.83□□□□□ -0.68
NECAP1-201ENST00000339754 ISM2Q6H9L7 571 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 TOGARAM2Q6ZUX3 1019 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 PNKPQ96T60 521 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 SUGCTQ9HAC7 445 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 SALL1Q9NSC2 1324 aa10.83□□□□□ -0.68
NECAP1-201ENST00000339754 CUTAO60888 179 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 SERPINC1P01008 464 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 TOP1P11387 765 aaKnown RBP10.82□□□□□ -0.68
NECAP1-201ENST00000339754 GUCY1B3Q02153 619 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 SRGAP1Q7Z6B7 1085 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 MSANTD4Q8NCY6 345 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 EYA1Q99502 592 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 BAG1Q99933 345 aaPredicted RBP10.82□□□□□ -0.68
NECAP1-201ENST00000339754 DEF6Q9H4E7 631 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 ABCB6Q9NP58 842 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 INTS13Q9NVM9 706 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 BABAM1Q9NWV8 329 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 TLR7Q9NYK1 1049 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms