RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 EPHA10Q5JZY3 1008 aa23.35■■□□□ 1.33
UBC-201ENST00000339647 DDX46Q7L014 1031 aaKnown RBP23.35■■□□□ 1.33
UBC-201ENST00000339647 ABCC6O95255 1503 aa23.34■■□□□ 1.33
UBC-201ENST00000339647 VWA3AA6NCI4 1184 aa23.34■■□□□ 1.33
UBC-201ENST00000339647 CARMIL3Q8ND23 1372 aa23.34■■□□□ 1.33
UBC-201ENST00000339647 ADAMTS13Q76LX8 1427 aa23.34■■□□□ 1.33
UBC-201ENST00000339647 PDIA3P30101 505 aaKnown RBP23.34■■□□□ 1.33
UBC-201ENST00000339647 UBASH3AP57075 661 aa23.34■■□□□ 1.33
UBC-201ENST00000339647 EXOSC10Q01780 885 aaKnown RBP23.34■■□□□ 1.33
UBC-201ENST00000339647 CCDC9Q9Y3X0 531 aaKnown RBP23.34■■□□□ 1.33
UBC-201ENST00000339647 TRIM66O15016 1216 aa23.33■■□□□ 1.33
UBC-201ENST00000339647 TPM1P09493 284 aa23.33■■□□□ 1.33
UBC-201ENST00000339647 CCDC191Q8NCU4 936 aa23.33■■□□□ 1.33
UBC-201ENST00000339647 WDR24Q96S15 920 aa23.33■■□□□ 1.33
UBC-201ENST00000339647 UTYO14607 1347 aa23.33■■□□□ 1.32
UBC-201ENST00000339647 TMEM232C9JQI7 657 aa23.33■■□□□ 1.32
UBC-201ENST00000339647 PSME1Q06323 249 aa23.33■■□□□ 1.32
UBC-201ENST00000339647 DHX8Q14562 1220 aaKnown RBP23.33■■□□□ 1.32
UBC-201ENST00000339647 NBPF6Q5VWK0 638 aa23.32■■□□□ 1.32
UBC-201ENST00000339647 NBPF4Q96M43 638 aa23.32■■□□□ 1.32
UBC-201ENST00000339647 NCAPD2Q15021 1401 aa23.32■■□□□ 1.32
UBC-201ENST00000339647 KDM3BQ7LBC6 1761 aa23.32■■□□□ 1.32
UBC-201ENST00000339647 SPTLC2O15270 562 aa23.32■■□□□ 1.32
UBC-201ENST00000339647 SERPINC1P01008 464 aa23.32■■□□□ 1.32
UBC-201ENST00000339647 HMGB1P09429 215 aaKnown RBP23.32■■□□□ 1.32
UBC-201ENST00000339647 TFCP2Q12800 502 aa23.32■■□□□ 1.32
UBC-201ENST00000339647 GPS2Q13227 327 aa23.32■■□□□ 1.32
UBC-201ENST00000339647 CFAP100Q494V2 611 aa23.32■■□□□ 1.32
UBC-201ENST00000339647 LAMA4Q16363 1823 aa23.31■■□□□ 1.32
UBC-201ENST00000339647 IGKV5-2P06315 115 aa23.31■■□□□ 1.32
UBC-201ENST00000339647 PARD6BQ9BYG5 372 aa23.31■■□□□ 1.32
UBC-201ENST00000339647 GJB4Q9NTQ9 266 aa23.31■■□□□ 1.32
UBC-201ENST00000339647 TNNI3KQ59H18 835 aa23.31■■□□□ 1.32
UBC-201ENST00000339647 C10orf67Q8IYJ2 551 aa23.31■■□□□ 1.32
UBC-201ENST00000339647 GPR161Q8N6U8 529 aaKnown RBP23.31■■□□□ 1.32
UBC-201ENST00000339647 ZBTB9Q96C00 473 aa23.31■■□□□ 1.32
UBC-201ENST00000339647 FUT8Q9BYC5 575 aa23.31■■□□□ 1.32
UBC-201ENST00000339647 PPP2R2CQ9Y2T4 447 aa23.31■■□□□ 1.32
UBC-201ENST00000339647 FPGT-TNNI3KV9GXZ4 949 aa23.31■■□□□ 1.32
UBC-201ENST00000339647 MED1Q15648 1581 aaPredicted RBP23.31■■□□□ 1.32
UBC-201ENST00000339647 GNG11P61952 73 aa23.3■■□□□ 1.32
UBC-201ENST00000339647 DBNDD2Q9BQY9 259 aa23.3■■□□□ 1.32
UBC-201ENST00000339647 AGXT2Q9BYV1 514 aa23.3■■□□□ 1.32
UBC-201ENST00000339647 ARFGAP3Q9NP61 516 aa23.3■■□□□ 1.32
UBC-201ENST00000339647 MAP3K9P80192 1104 aa23.3■■□□□ 1.32
UBC-201ENST00000339647 PPP2R3AQ06190 1150 aa23.3■■□□□ 1.32
UBC-201ENST00000339647 GPHNQ9NQX3 736 aaPredicted RBP23.3■■□□□ 1.32
UBC-201ENST00000339647 RSPH14Q9UHP6 348 aa23.3■■□□□ 1.32
UBC-201ENST00000339647 IKBKBO14920 756 aa23.29■■□□□ 1.32
UBC-201ENST00000339647 PFKFB1P16118 471 aa23.29■■□□□ 1.32
UBC-201ENST00000339647 CASQ1P31415 396 aa23.29■■□□□ 1.32
UBC-201ENST00000339647 ZNF530Q6P9A1 599 aaPredicted RBP23.29■■□□□ 1.32
UBC-201ENST00000339647 KCNG4Q8TDN1 519 aa23.29■■□□□ 1.32
UBC-201ENST00000339647 RASSF4Q9H2L5 321 aa23.29■■□□□ 1.32
UBC-201ENST00000339647 RGPD8O14715 1765 aaPredicted RBP23.29■■□□□ 1.32
UBC-201ENST00000339647 E7EWF7 191 aa23.29■■□□□ 1.32
UBC-201ENST00000339647 MYO1CO00159 1063 aa23.29■■□□□ 1.32
UBC-201ENST00000339647 TMEM139Q8IV31 216 aa23.29■■□□□ 1.32
UBC-201ENST00000339647 ABTB2Q8N961 1025 aa23.29■■□□□ 1.32
UBC-201ENST00000339647 ADAM21Q9UKJ8 722 aa23.29■■□□□ 1.32
UBC-201ENST00000339647 AMOTL2Q9Y2J4 779 aa23.29■■□□□ 1.32
UBC-201ENST00000339647 H3BQF6 201 aa23.28■■□□□ 1.32
UBC-201ENST00000339647 ZSCAN12O43309 604 aa23.28■■□□□ 1.32
UBC-201ENST00000339647 LMAN1P49257 510 aa23.28■■□□□ 1.32
UBC-201ENST00000339647 RSRC2Q7L4I2 434 aaKnown RBP23.28■■□□□ 1.32
UBC-201ENST00000339647 ZFP91Q96JP5 570 aaPredicted RBP23.28■■□□□ 1.32
UBC-201ENST00000339647 TOP1P11387 765 aaKnown RBP23.28■■□□□ 1.32
UBC-201ENST00000339647 VSTM4Q8IW00 320 aa23.28■■□□□ 1.32
UBC-201ENST00000339647 MPHOSPH8Q99549 860 aa23.28■■□□□ 1.32
UBC-201ENST00000339647 SETD1BQ9UPS6 1966 aaKnown RBP23.28■■□□□ 1.32
UBC-201ENST00000339647 AXDND1Q5T1B0 1012 aaPredicted RBP23.27■■□□□ 1.32
UBC-201ENST00000339647 POLR3EQ9NVU0 708 aa23.27■■□□□ 1.32
UBC-201ENST00000339647 MRFAP1Q9Y605 127 aa23.27■■□□□ 1.32
UBC-201ENST00000339647 TNNT3P45378 269 aaPredicted RBP23.27■■□□□ 1.32
UBC-201ENST00000339647 C14orf37Q86TY3 774 aa23.27■■□□□ 1.32
UBC-201ENST00000339647 CERS3Q8IU89 383 aa23.27■■□□□ 1.32
UBC-201ENST00000339647 UBR1Q8IWV7 1749 aa23.27■■□□□ 1.32
UBC-201ENST00000339647 MROH7-TTC4A0A0A0MT08 1334 aa23.27■■□□□ 1.32
UBC-201ENST00000339647 YEATS4O95619 227 aa23.26■■□□□ 1.31
UBC-201ENST00000339647 MARCKSP29966 332 aaPredicted RBP23.26■■□□□ 1.31
UBC-201ENST00000339647 HSP90AA4PQ58FG1 418 aa23.26■■□□□ 1.31
UBC-201ENST00000339647 MYSM1Q5VVJ2 828 aa23.26■■□□□ 1.31
UBC-201ENST00000339647 ZNF274Q96GC6 653 aaPredicted RBP23.26■■□□□ 1.31
UBC-201ENST00000339647 HAUS7Q99871 368 aa23.26■■□□□ 1.31
UBC-201ENST00000339647 EID1Q9Y6B2 187 aa23.26■■□□□ 1.31
UBC-201ENST00000339647 WDHD1O75717 1129 aaPredicted RBP23.26■■□□□ 1.31
UBC-201ENST00000339647 RIC3Q7Z5B4 369 aa23.26■■□□□ 1.31
UBC-201ENST00000339647 C8orf76Q96K31 380 aa23.26■■□□□ 1.31
UBC-201ENST00000339647 KIF28PB7ZC32 967 aa23.26■■□□□ 1.31
UBC-201ENST00000339647 CBFA2T2O43439 604 aa23.26■■□□□ 1.31
UBC-201ENST00000339647 ARHGAP6O43182 974 aa23.25■■□□□ 1.31
UBC-201ENST00000339647 MYL5Q02045 173 aa23.25■■□□□ 1.31
UBC-201ENST00000339647 TOGARAM2Q6ZUX3 1019 aa23.25■■□□□ 1.31
UBC-201ENST00000339647 RAB11FIP4Q86YS3 637 aa23.25■■□□□ 1.31
UBC-201ENST00000339647 ZSWIM4Q9H7M6 989 aa23.25■■□□□ 1.31
UBC-201ENST00000339647 FANCLQ9NW38 375 aa23.25■■□□□ 1.31
UBC-201ENST00000339647 DDX58O95786 925 aaKnown RBP23.25■■□□□ 1.31
UBC-201ENST00000339647 LONRF2Q1L5Z9 754 aa23.25■■□□□ 1.31
UBC-201ENST00000339647 FCHSD1Q86WN1 690 aa23.25■■□□□ 1.31
UBC-201ENST00000339647 FBXO18Q8NFZ0 1043 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms