RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CTSWP56202 376 aa19.27■□□□□ 0.68
LITAF-201ENST00000339430 CCDC57Q2TAC2 916 aa19.27■□□□□ 0.68
LITAF-201ENST00000339430 OFD1O75665 1012 aa19.27■□□□□ 0.67
LITAF-201ENST00000339430 SETDB2Q96T68 719 aa19.27■□□□□ 0.67
LITAF-201ENST00000339430 LIG1P18858 919 aa19.26■□□□□ 0.67
LITAF-201ENST00000339430 PLCB2Q00722 1185 aa19.26■□□□□ 0.67
LITAF-201ENST00000339430 FUCA2Q9BTY2 467 aa19.26■□□□□ 0.67
LITAF-201ENST00000339430 GPR108Q9NPR9 543 aa19.26■□□□□ 0.67
LITAF-201ENST00000339430 ZNF500O60304 480 aaPredicted RBP19.26■□□□□ 0.67
LITAF-201ENST00000339430 FOSBP53539 338 aa19.26■□□□□ 0.67
LITAF-201ENST00000339430 FKBP4Q02790 459 aaKnown RBP eCLIP19.26■□□□□ 0.67
LITAF-201ENST00000339430 CAMK4Q16566 473 aa19.26■□□□□ 0.67
LITAF-201ENST00000339430 ZNF827Q17R98 1081 aa19.26■□□□□ 0.67
LITAF-201ENST00000339430 UVSSAQ2YD98 709 aa19.26■□□□□ 0.67
LITAF-201ENST00000339430 GREM2Q9H772 168 aa19.26■□□□□ 0.67
LITAF-201ENST00000339430 HELLSQ9NRZ9 838 aa19.26■□□□□ 0.67
LITAF-201ENST00000339430 HMGB2P26583 209 aaKnown RBP19.25■□□□□ 0.67
LITAF-201ENST00000339430 SCRN1Q12765 414 aa19.25■□□□□ 0.67
LITAF-201ENST00000339430 IFIT5Q13325 482 aaKnown RBP19.25■□□□□ 0.67
LITAF-201ENST00000339430 ZMYM1Q5SVZ6 1142 aa19.25■□□□□ 0.67
LITAF-201ENST00000339430 ILDR1Q86SU0 546 aaPredicted RBP19.25■□□□□ 0.67
LITAF-201ENST00000339430 SPATA32Q96LK8 384 aa19.25■□□□□ 0.67
LITAF-201ENST00000339430 TFCP2L1Q9NZI6 479 aa19.25■□□□□ 0.67
LITAF-201ENST00000339430 ADCY5O95622 1261 aa19.25■□□□□ 0.67
LITAF-201ENST00000339430 ADORA1P30542 326 aa19.25■□□□□ 0.67
LITAF-201ENST00000339430 MYH3P11055 1940 aa19.24■□□□□ 0.67
LITAF-201ENST00000339430 MAST3O60307 1309 aa19.24■□□□□ 0.67
LITAF-201ENST00000339430 HSPD1P10809 573 aaKnown RBP19.24■□□□□ 0.67
LITAF-201ENST00000339430 PDIA4P13667 645 aaKnown RBP19.24■□□□□ 0.67
LITAF-201ENST00000339430 APOBRQ0VD83 1088 aa19.24■□□□□ 0.67
LITAF-201ENST00000339430 ERFEQ4G0M1 354 aa19.24■□□□□ 0.67
LITAF-201ENST00000339430 CHST3Q7LGC8 479 aa19.24■□□□□ 0.67
LITAF-201ENST00000339430 CEP126Q9P2H0 1117 aa19.24■□□□□ 0.67
LITAF-201ENST00000339430 NAP1L2Q9ULW6 460 aaPredicted RBP19.24■□□□□ 0.67
LITAF-201ENST00000339430 H3BQV1 296 aa19.24■□□□□ 0.67
LITAF-201ENST00000339430 M0R2C6 588 aa19.24■□□□□ 0.67
LITAF-201ENST00000339430 PPFIA3O75145 1194 aa19.24■□□□□ 0.67
LITAF-201ENST00000339430 ITGA6P23229 1130 aa19.24■□□□□ 0.67
LITAF-201ENST00000339430 IFFO2Q5TF58 517 aa19.24■□□□□ 0.67
LITAF-201ENST00000339430 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.24■□□□□ 0.67
LITAF-201ENST00000339430 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.24■□□□□ 0.67
LITAF-201ENST00000339430 GTF2E1P29083 439 aaPredicted RBP19.23■□□□□ 0.67
LITAF-201ENST00000339430 EN1Q05925 392 aaPredicted RBP19.23■□□□□ 0.67
LITAF-201ENST00000339430 GORABQ5T7V8 394 aa19.23■□□□□ 0.67
LITAF-201ENST00000339430 DHX32Q7L7V1 743 aaKnown RBP19.23■□□□□ 0.67
LITAF-201ENST00000339430 AKT1S1Q96B36 256 aa19.23■□□□□ 0.67
LITAF-201ENST00000339430 ZNF830Q96NB3 372 aaPredicted RBP19.23■□□□□ 0.67
LITAF-201ENST00000339430 GOLGA6L4A6NEF3 574 aa19.22■□□□□ 0.67
LITAF-201ENST00000339430 RNF113AO15541 343 aaKnown RBP19.22■□□□□ 0.67
LITAF-201ENST00000339430 CIAO1O76071 339 aa19.22■□□□□ 0.67
LITAF-201ENST00000339430 CCT2P78371 535 aaKnown RBP19.22■□□□□ 0.67
LITAF-201ENST00000339430 TAF7LQ5H9L4 462 aa19.22■□□□□ 0.67
LITAF-201ENST00000339430 TTLL5Q6EMB2 1281 aa19.22■□□□□ 0.67
LITAF-201ENST00000339430 NBPF5PQ86XG9 351 aaPredicted RBP19.22■□□□□ 0.67
LITAF-201ENST00000339430 DSCC1Q9BVC3 393 aa19.22■□□□□ 0.67
LITAF-201ENST00000339430 ELP1O95163 1332 aa19.22■□□□□ 0.67
LITAF-201ENST00000339430 E7EWF7 191 aa19.22■□□□□ 0.67
LITAF-201ENST00000339430 LEO1Q8WVC0 666 aaPredicted RBP19.22■□□□□ 0.67
LITAF-201ENST00000339430 SCAND2PQ9GZW5 306 aaPredicted RBP19.22■□□□□ 0.67
LITAF-201ENST00000339430 R3HCC1Q9Y3T6 440 aaKnown RBP19.22■□□□□ 0.67
LITAF-201ENST00000339430 DDX60Q8IY21 1712 aaKnown RBP19.22■□□□□ 0.67
LITAF-201ENST00000339430 ANKRD18BA2A2Z9 1011 aa19.21■□□□□ 0.67
LITAF-201ENST00000339430 GYS1P13807 737 aa19.21■□□□□ 0.67
LITAF-201ENST00000339430 EZH2Q15910 746 aaKnown RBP19.21■□□□□ 0.67
LITAF-201ENST00000339430 TTC39AQ5SRH9 613 aa19.21■□□□□ 0.67
LITAF-201ENST00000339430 NUP62CLQ9H1M0 184 aa19.21■□□□□ 0.67
LITAF-201ENST00000339430 DACT1Q9NYF0 836 aa19.21■□□□□ 0.67
LITAF-201ENST00000339430 KDM4AO75164 1064 aa19.21■□□□□ 0.67
LITAF-201ENST00000339430 MCM5P33992 734 aa19.21■□□□□ 0.67
LITAF-201ENST00000339430 RESTQ13127 1097 aa19.21■□□□□ 0.67
LITAF-201ENST00000339430 NFIXQ14938 502 aa19.21■□□□□ 0.67
LITAF-201ENST00000339430 OSBP2Q969R2 916 aa19.21■□□□□ 0.67
LITAF-201ENST00000339430 XAGE2Q96GT9 111 aa19.21■□□□□ 0.67
LITAF-201ENST00000339430 NYXQ9GZU5 481 aa19.21■□□□□ 0.67
LITAF-201ENST00000339430 HMGB1P09429 215 aaKnown RBP19.2■□□□□ 0.66
LITAF-201ENST00000339430 SCARF1Q14162 830 aa19.2■□□□□ 0.66
LITAF-201ENST00000339430 CKAP2LQ8IYA6 745 aa19.2■□□□□ 0.66
LITAF-201ENST00000339430 CAMKK2Q96RR4 588 aa19.2■□□□□ 0.66
LITAF-201ENST00000339430 NCOA5Q9HCD5 579 aaKnown RBP19.2■□□□□ 0.66
LITAF-201ENST00000339430 AP5Z1O43299 807 aa19.2■□□□□ 0.66
LITAF-201ENST00000339430 PFKFB2O60825 505 aa19.2■□□□□ 0.66
LITAF-201ENST00000339430 CCDC192P0DO97 292 aa19.2■□□□□ 0.66
LITAF-201ENST00000339430 CEBPZQ03701 1054 aaKnown RBP19.2■□□□□ 0.66
LITAF-201ENST00000339430 WASHC4Q2M389 1173 aa19.2■□□□□ 0.66
LITAF-201ENST00000339430 CCDC158Q5M9N0 1113 aa19.2■□□□□ 0.66
LITAF-201ENST00000339430 TPTE2Q6XPS3 522 aa19.2■□□□□ 0.66
LITAF-201ENST00000339430 CCDC24Q8N4L8 307 aa19.2■□□□□ 0.66
LITAF-201ENST00000339430 RGPD3A6NKT7 1758 aaPredicted RBP19.2■□□□□ 0.66
LITAF-201ENST00000339430 RGPD4Q7Z3J3 1758 aa19.2■□□□□ 0.66
LITAF-201ENST00000339430 COL24A1Q17RW2 1714 aa19.19■□□□□ 0.66
LITAF-201ENST00000339430 MAP3K11Q16584 847 aa19.19■□□□□ 0.66
LITAF-201ENST00000339430 CTDNEP1O95476 244 aa19.19■□□□□ 0.66
LITAF-201ENST00000339430 EXOSC10Q01780 885 aaKnown RBP19.19■□□□□ 0.66
LITAF-201ENST00000339430 PI16Q6UXB8 463 aa19.19■□□□□ 0.66
LITAF-201ENST00000339430 C3orf67Q6ZVT6 689 aa19.19■□□□□ 0.66
LITAF-201ENST00000339430 NSUN7Q8NE18 718 aaKnown RBP19.19■□□□□ 0.66
LITAF-201ENST00000339430 PGBD1Q96JS3 809 aa19.19■□□□□ 0.66
LITAF-201ENST00000339430 ABCC12Q96J65 1359 aa19.19■□□□□ 0.66
LITAF-201ENST00000339430 HAND2P61296 217 aa19.18■□□□□ 0.66
LITAF-201ENST00000339430 CCDC152Q4G0S7 254 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms