RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 PDE6AP16499 860 aa8.81□□□□□ -1
SRFBP1-201ENST00000339397 TM4SF1P30408 202 aa8.81□□□□□ -1
SRFBP1-201ENST00000339397 KRT27Q7Z3Y8 459 aa8.81□□□□□ -1
SRFBP1-201ENST00000339397 ANKRD18AQ8IVF6 992 aa8.81□□□□□ -1
SRFBP1-201ENST00000339397 MAGEB6Q8N7X4 407 aa8.81□□□□□ -1
SRFBP1-201ENST00000339397 SMC3Q9UQE7 1217 aa8.81□□□□□ -1
SRFBP1-201ENST00000339397 JAG2Q9Y219 1238 aa8.81□□□□□ -1
SRFBP1-201ENST00000339397 SPEF2Q9C093 1822 aa8.81□□□□□ -1
SRFBP1-201ENST00000339397 TCRBV5S4A2TA0A5A2 114 aa8.81□□□□□ -1
SRFBP1-201ENST00000339397 JAK2O60674 1132 aa8.81□□□□□ -1
SRFBP1-201ENST00000339397 NCLP19338 710 aaKnown RBP8.81□□□□□ -1
SRFBP1-201ENST00000339397 TXNRD3Q86VQ6 643 aa8.81□□□□□ -1
SRFBP1-201ENST00000339397 GAS2L3Q86XJ1 694 aa8.81□□□□□ -1
SRFBP1-201ENST00000339397 DDX49Q9Y6V7 483 aaKnown RBP8.81□□□□□ -1
SRFBP1-201ENST00000339397 NPHP1O15259 732 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 PRKAB2O43741 272 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 RPS8P62241 208 aaKnown RBP8.8□□□□□ -1
SRFBP1-201ENST00000339397 APOBRQ0VD83 1088 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 SLC10A5Q5PT55 438 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 FAM173BQ6P4H8 233 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 TPTE2Q6XPS3 522 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 ADGRA1Q86SQ6 560 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 RAB11FIP4Q86YS3 637 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 STK11IPQ8N1F8 1099 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 GPT2Q8TD30 523 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 ZNF512BQ96KM6 892 aaPredicted RBP8.8□□□□□ -1
SRFBP1-201ENST00000339397 NLRP3Q96P20 1036 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 CDC5LQ99459 802 aaKnown RBP8.8□□□□□ -1
SRFBP1-201ENST00000339397 NBPF3Q9H094 633 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 BSDC1Q9NW68 430 aaPredicted RBP8.8□□□□□ -1
SRFBP1-201ENST00000339397 TFCP2L1Q9NZI6 479 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 STX6O43752 255 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 APPP05067 770 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 CCT2P78371 535 aaKnown RBP8.8□□□□□ -1
SRFBP1-201ENST00000339397 MIGA1Q8NAN2 632 aa8.8□□□□□ -1
SRFBP1-201ENST00000339397 NCOA5Q9HCD5 579 aaKnown RBP8.8□□□□□ -1
SRFBP1-201ENST00000339397 RBM27Q9P2N5 1060 aaKnown RBP8.8□□□□□ -1
SRFBP1-201ENST00000339397 GADD45BO75293 160 aaPredicted RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 EXOSC10Q01780 885 aaKnown RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 FERMT3Q86UX7 667 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 FAM84BQ96KN1 310 aaPredicted RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 GPR101Q96P66 508 aaPredicted RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 ARMT1Q9H993 441 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 ABCF2Q9UG63 623 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 SBF2Q86WG5 1849 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 TCHHQ07283 1943 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 ZFYP08048 801 aaPredicted RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 FGD1P98174 961 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 SCRN1Q12765 414 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 DHX32Q7L7V1 743 aaKnown RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 DDX11Q96FC9 970 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 SH2B1Q9NRF2 756 aaPredicted RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 BRPF3Q9ULD4 1205 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 NAP1L2Q9ULW6 460 aaPredicted RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 TACC3Q9Y6A5 838 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 RTL9Q8NET4 1388 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 NHSQ6T4R5 1651 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 CICQ96RK0 1608 aaPredicted RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 VPS37CA5D8V6 355 aaPredicted RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 UQCRFS1P1P0C7P4 283 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 GYS1P13807 737 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 HSP90B1P14625 803 aaKnown RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 FOSBP53539 338 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 KRT32Q14532 448 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 CAVIN1Q6NZI2 390 aaKnown RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 ZSCAN31Q96LW9 406 aaPredicted RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 STRBPQ96SI9 672 aaKnown RBP8.79□□□□□ -1
SRFBP1-201ENST00000339397 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.79□□□□□ -1
SRFBP1-201ENST00000339397 MTMR6Q9Y217 621 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 CNPY2Q9Y2B0 182 aa8.79□□□□□ -1
SRFBP1-201ENST00000339397 BCORQ6W2J9 1755 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 LRP5O75197 1615 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 MBD4O95243 580 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 ZSCAN22P10073 491 aaPredicted RBP8.78□□□□□ -1
SRFBP1-201ENST00000339397 CDC37L1Q7L3B6 337 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 TBC1D10CQ8IV04 446 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 ZNF384Q8TF68 577 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 EPB41L4AQ9HCS5 686 aaPredicted RBP8.78□□□□□ -1
SRFBP1-201ENST00000339397 LRP2BPQ9P2M1 347 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 GOLGA6L22H0YM25 854 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 ANTXR2P58335 489 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 TTF1Q15361 905 aaPredicted RBP8.78□□□□□ -1
SRFBP1-201ENST00000339397 UBE3CQ15386 1083 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 LCORLQ8N3X6 602 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 PANK2Q9BZ23 570 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 NYXQ9GZU5 481 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 SENP2Q9HC62 589 aa8.78□□□□□ -1
SRFBP1-201ENST00000339397 COL1A1P02452 1464 aaPredicted RBP8.77□□□□□ -1
SRFBP1-201ENST00000339397 CTDNEP1O95476 244 aa8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 EVX2Q03828 476 aa8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 TXNRD1Q16881 649 aa8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 IMMTQ16891 758 aaKnown RBP8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 LARP1BQ659C4 914 aaKnown RBP8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 USP48Q86UV5 1035 aa8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 AIDAQ96BJ3 306 aa8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 ALDH8A1Q9H2A2 487 aaPredicted RBP8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 TAF1LQ8IZX4 1826 aa8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 WDR33Q9C0J8 1336 aaKnown RBP8.77□□□□□ -1.01
SRFBP1-201ENST00000339397 C4BP0C0L5 1744 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 479.9 ms