RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 FAM84BQ96KN1 310 aaPredicted RBP16.86■□□□□ 0.29
NUDCD3-201ENST00000338427 PRMT6Q96LA8 375 aaPredicted RBP16.86■□□□□ 0.29
NUDCD3-201ENST00000338427 IQSEC3Q9UPP2 1182 aaPredicted RBP16.86■□□□□ 0.29
NUDCD3-201ENST00000338427 GRIK5Q16478 980 aa16.85■□□□□ 0.29
NUDCD3-201ENST00000338427 RABL6Q3YEC7 729 aaPredicted RBP16.85■□□□□ 0.29
NUDCD3-201ENST00000338427 ZNF804AQ7Z570 1209 aa16.85■□□□□ 0.29
NUDCD3-201ENST00000338427 HDAC9Q9UKV0 1011 aa16.85■□□□□ 0.29
NUDCD3-201ENST00000338427 NOB1Q9ULX3 412 aaKnown RBP16.85■□□□□ 0.29
NUDCD3-201ENST00000338427 CASP8AP2Q9UKL3 1982 aa16.85■□□□□ 0.29
NUDCD3-201ENST00000338427 MYO3BQ8WXR4 1341 aa16.85■□□□□ 0.29
NUDCD3-201ENST00000338427 PITPNM2Q9BZ72 1349 aa16.85■□□□□ 0.29
NUDCD3-201ENST00000338427 THSD7BQ9C0I4 1608 aa16.85■□□□□ 0.29
NUDCD3-201ENST00000338427 CLRN2A0PK11 232 aa16.84■□□□□ 0.29
NUDCD3-201ENST00000338427 TRPA1O75762 1119 aa16.84■□□□□ 0.29
NUDCD3-201ENST00000338427 SLC10A3P09131 477 aa16.84■□□□□ 0.29
NUDCD3-201ENST00000338427 MKRN3Q13064 507 aaKnown RBP16.84■□□□□ 0.29
NUDCD3-201ENST00000338427 TTLL12Q14166 644 aaPredicted RBP16.84■□□□□ 0.29
NUDCD3-201ENST00000338427 DLGAP5Q15398 846 aa16.84■□□□□ 0.29
NUDCD3-201ENST00000338427 CFAP100Q494V2 611 aa16.84■□□□□ 0.29
NUDCD3-201ENST00000338427 RASAL3Q86YV0 1011 aa16.84■□□□□ 0.29
NUDCD3-201ENST00000338427 TDRD7Q8NHU6 1098 aaKnown RBP16.84■□□□□ 0.29
NUDCD3-201ENST00000338427 SMC4Q9NTJ3 1288 aa16.84■□□□□ 0.29
NUDCD3-201ENST00000338427 RNF186Q9NXI6 227 aa16.84■□□□□ 0.29
NUDCD3-201ENST00000338427 PTPRCP08575 1304 aa16.84■□□□□ 0.29
NUDCD3-201ENST00000338427 HIBADHP31937 336 aaKnown RBP16.83■□□□□ 0.28
NUDCD3-201ENST00000338427 UBE4AQ14139 1066 aa16.83■□□□□ 0.28
NUDCD3-201ENST00000338427 ABHD8Q96I13 439 aa16.83■□□□□ 0.28
NUDCD3-201ENST00000338427 CCER2I3L3R5 266 aa16.82■□□□□ 0.28
NUDCD3-201ENST00000338427 PTPN12Q05209 780 aaKnown RBP16.82■□□□□ 0.28
NUDCD3-201ENST00000338427 ALDH1L2Q3SY69 923 aa16.82■□□□□ 0.28
NUDCD3-201ENST00000338427 A0A1B0GUL6 1792 aa16.82■□□□□ 0.28
NUDCD3-201ENST00000338427 RFX5P48382 616 aaPredicted RBP16.81■□□□□ 0.28
NUDCD3-201ENST00000338427 RBM5P52756 815 aaKnown RBP eCLIP16.81■□□□□ 0.28
NUDCD3-201ENST00000338427 METTL24Q5JXM2 366 aa16.81■□□□□ 0.28
NUDCD3-201ENST00000338427 FBXO33Q7Z6M2 555 aa16.81■□□□□ 0.28
NUDCD3-201ENST00000338427 DEFB129Q9H1M3 183 aa16.81■□□□□ 0.28
NUDCD3-201ENST00000338427 FAM205AQ6ZU69 1335 aa16.8■□□□□ 0.28
NUDCD3-201ENST00000338427 BCAMP50895 628 aa16.8■□□□□ 0.28
NUDCD3-201ENST00000338427 CHAF1AQ13111 956 aaPredicted RBP16.8■□□□□ 0.28
NUDCD3-201ENST00000338427 MROH5Q6ZUA9 1318 aa16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 CA12O43570 354 aa16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 PDE8BO95263 885 aa16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 FKBP1AP62942 108 aaKnown RBP16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 FKBP1BP68106 108 aa16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 MFSD14BQ5SR56 506 aa16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 NBPF12Q5TAG4 269 aaPredicted RBP16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 VGLL2Q8N8G2 317 aa16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 MTMR14Q8NCE2 650 aa16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 MCOLN1Q9GZU1 580 aa16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 VEZTQ9HBM0 779 aa16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 ANGEL1Q9UNK9 670 aaKnown RBP16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 TTF2Q9UNY4 1162 aaKnown RBP16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 TNNQ9UQP3 1299 aa16.79■□□□□ 0.28
NUDCD3-201ENST00000338427 SPDYE2BA6NHP3 402 aa16.78■□□□□ 0.28
NUDCD3-201ENST00000338427 CCDC85CA6NKD9 419 aa16.78■□□□□ 0.28
NUDCD3-201ENST00000338427 SPDYE6P0CI01 402 aa16.78■□□□□ 0.28
NUDCD3-201ENST00000338427 MMP14P50281 582 aa16.78■□□□□ 0.28
NUDCD3-201ENST00000338427 APOBEC3FQ8IUX4 373 aaKnown RBP16.78■□□□□ 0.28
NUDCD3-201ENST00000338427 TDRD3Q9H7E2 651 aaKnown RBP16.78■□□□□ 0.28
NUDCD3-201ENST00000338427 NF2P35240 595 aa16.77■□□□□ 0.28
NUDCD3-201ENST00000338427 RARSP54136 660 aaKnown RBP16.77■□□□□ 0.28
NUDCD3-201ENST00000338427 DGKZQ13574 1117 aa16.77■□□□□ 0.28
NUDCD3-201ENST00000338427 MIER1Q8N108 512 aa16.77■□□□□ 0.28
NUDCD3-201ENST00000338427 EYA2O00167 538 aa16.76■□□□□ 0.27
NUDCD3-201ENST00000338427 TBC1D8O95759 1140 aa16.76■□□□□ 0.27
NUDCD3-201ENST00000338427 FGFR2P21802 821 aa16.76■□□□□ 0.27
NUDCD3-201ENST00000338427 RASA3Q14644 834 aa16.76■□□□□ 0.27
NUDCD3-201ENST00000338427 LDLRAD1Q5T700 205 aa16.76■□□□□ 0.27
NUDCD3-201ENST00000338427 ATG9AQ7Z3C6 839 aa16.76■□□□□ 0.27
NUDCD3-201ENST00000338427 ARMC9Q7Z3E5 817 aa16.76■□□□□ 0.27
NUDCD3-201ENST00000338427 VPS37DQ86XT2 251 aa16.76■□□□□ 0.27
NUDCD3-201ENST00000338427 CDAN1Q8IWY9 1227 aa16.76■□□□□ 0.27
NUDCD3-201ENST00000338427 CLMNQ96JQ2 1002 aa16.76■□□□□ 0.27
NUDCD3-201ENST00000338427 SIL1Q9H173 461 aa16.76■□□□□ 0.27
NUDCD3-201ENST00000338427 ZNF70Q9UC06 446 aaPredicted RBP16.76■□□□□ 0.27
NUDCD3-201ENST00000338427 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
NUDCD3-201ENST00000338427 MEIS3Q99687 375 aa16.75■□□□□ 0.27
NUDCD3-201ENST00000338427 R3HDMLQ9H3Y0 253 aa16.75■□□□□ 0.27
NUDCD3-201ENST00000338427 LRRFIP2Q9Y608 721 aaKnown RBP16.75■□□□□ 0.27
NUDCD3-201ENST00000338427 PAPPA2Q9BXP8 1791 aa16.74■□□□□ 0.27
NUDCD3-201ENST00000338427 TCP10L2B9ZVM9 353 aa16.74■□□□□ 0.27
NUDCD3-201ENST00000338427 FRAT2O75474 233 aaPredicted RBP16.74■□□□□ 0.27
NUDCD3-201ENST00000338427 USP2O75604 605 aaPredicted RBP16.74■□□□□ 0.27
NUDCD3-201ENST00000338427 BCAR3O75815 825 aa16.74■□□□□ 0.27
NUDCD3-201ENST00000338427 UBTFL1P0CB47 393 aaPredicted RBP16.74■□□□□ 0.27
NUDCD3-201ENST00000338427 CRKP46108 304 aa16.74■□□□□ 0.27
NUDCD3-201ENST00000338427 DZIP1LQ8IYY4 767 aaKnown RBP16.74■□□□□ 0.27
NUDCD3-201ENST00000338427 SLC10A4Q96EP9 437 aa16.74■□□□□ 0.27
NUDCD3-201ENST00000338427 MYO1BO43795 1136 aa16.73■□□□□ 0.27
NUDCD3-201ENST00000338427 TM4SF4P48230 202 aa16.73■□□□□ 0.27
NUDCD3-201ENST00000338427 CACNB3P54284 484 aa16.73■□□□□ 0.27
NUDCD3-201ENST00000338427 CAVIN4Q5BKX8 364 aa16.73■□□□□ 0.27
NUDCD3-201ENST00000338427 API5Q9BZZ5 524 aaKnown RBP16.73■□□□□ 0.27
NUDCD3-201ENST00000338427 SAGE1Q9NXZ1 904 aa16.73■□□□□ 0.27
NUDCD3-201ENST00000338427 SSC5DA1L4H1 1573 aa16.72■□□□□ 0.27
NUDCD3-201ENST00000338427 SPDYE2Q495Y8 402 aa16.72■□□□□ 0.27
NUDCD3-201ENST00000338427 SPRYD7Q5W111 196 aa16.72■□□□□ 0.27
NUDCD3-201ENST00000338427 SERPINA10Q9UK55 444 aa16.72■□□□□ 0.27
NUDCD3-201ENST00000338427 AKAP11Q9UKA4 1901 aa16.72■□□□□ 0.27
NUDCD3-201ENST00000338427 IFIT1P09914 478 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms