RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 CNTROBQ8N137 903 aa12.54□□□□□ -0.4
UBE2D3-202ENST00000338145 POLR3GLQ9BT43 218 aa12.54□□□□□ -0.4
UBE2D3-202ENST00000338145 CCDC85CA6NKD9 419 aa12.53□□□□□ -0.4
UBE2D3-202ENST00000338145 ECE1P42892 770 aa12.53□□□□□ -0.4
UBE2D3-202ENST00000338145 FKBP4Q02790 459 aaKnown RBP eCLIP12.53□□□□□ -0.42e-9■■□□□ 12.2
UBE2D3-202ENST00000338145 LINC01559Q495D7 138 aa12.53□□□□□ -0.4
UBE2D3-202ENST00000338145 SH3RF1Q7Z6J0 888 aa12.53□□□□□ -0.4
UBE2D3-202ENST00000338145 RTKN2Q8IZC4 609 aa12.53□□□□□ -0.4
UBE2D3-202ENST00000338145 ABT1Q9ULW3 272 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-202ENST00000338145 ANKRD31Q8N7Z5 1873 aa12.53□□□□□ -0.4
UBE2D3-202ENST00000338145 GDF9O60383 454 aa12.52□□□□□ -0.41
UBE2D3-202ENST00000338145 VARSP26640 1264 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-202ENST00000338145 C7orf43Q8WVR3 580 aa12.52□□□□□ -0.41
UBE2D3-202ENST00000338145 PANK3Q9H999 370 aa12.52□□□□□ -0.41
UBE2D3-202ENST00000338145 TBC1D2BQ9UPU7 963 aa12.52□□□□□ -0.41
UBE2D3-202ENST00000338145 NPR1P16066 1061 aa12.51□□□□□ -0.41
UBE2D3-202ENST00000338145 PTK2Q05397 1052 aa12.51□□□□□ -0.41
UBE2D3-202ENST00000338145 GPC2Q8N158 579 aa12.51□□□□□ -0.41
UBE2D3-202ENST00000338145 PKD2L1Q9P0L9 805 aa12.51□□□□□ -0.41
UBE2D3-202ENST00000338145 TIMELESSQ9UNS1 1208 aa12.51□□□□□ -0.41
UBE2D3-202ENST00000338145 ZNF330Q9Y3S2 320 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-202ENST00000338145 GTF3C3Q9Y5Q9 886 aa12.51□□□□□ -0.41
UBE2D3-202ENST00000338145 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-202ENST00000338145 SLX4Q8IY92 1834 aa12.51□□□□□ -0.41
UBE2D3-202ENST00000338145 FZD9O00144 591 aa12.5□□□□□ -0.41
UBE2D3-202ENST00000338145 MTHFSDQ2M296 383 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-202ENST00000338145 MAP1SQ66K74 1059 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-202ENST00000338145 CLEC4GQ6UXB4 293 aa12.5□□□□□ -0.41
UBE2D3-202ENST00000338145 MPNDQ8N594 471 aa12.5□□□□□ -0.41
UBE2D3-202ENST00000338145 DDX21Q9NR30 783 aaKnown RBP eCLIP12.5□□□□□ -0.41
UBE2D3-202ENST00000338145 HEG1Q9ULI3 1381 aa12.5□□□□□ -0.41
UBE2D3-202ENST00000338145 ADAMTSL1Q8N6G6 1762 aa12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 ARFGEF2Q9Y6D5 1785 aa12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 SCN7AQ01118 1682 aa12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 ZNF541Q9H0D2 1346 aa12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 KLRG2A4D1S0 409 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 CA12O43570 354 aa12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 GPR37L1O60883 481 aa12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 CAMTA2O94983 1202 aa12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 ALDH1B1P30837 517 aa12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 ZNF790Q6PG37 636 aa12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 EHBP1Q8NDI1 1231 aa12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 ZNF496Q96IT1 587 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 GPR101Q96P66 508 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 C1QTNF2Q9BXJ5 285 aa12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 ZNF277Q9NRM2 450 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-202ENST00000338145 UBR2Q8IWV8 1755 aa12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 RNF123Q5XPI4 1314 aa12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 LMOD1P29536 600 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 MAP2K2P36507 400 aa12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 IARSP41252 1262 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 TEFQ10587 303 aa12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 LAPTM4AQ15012 233 aa12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 TPTE2Q6XPS3 522 aa12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 TRIM67Q6ZTA4 783 aa12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 NBPF5PQ86XG9 351 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 DZIP3Q86Y13 1208 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 JDP2Q8WYK2 163 aa12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 CAPNS2Q96L46 248 aa12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 FMNL2Q96PY5 1086 aa12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 ZNF652Q9Y2D9 606 aa12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 KNSTRNQ9Y448 316 aa12.48□□□□□ -0.41
UBE2D3-202ENST00000338145 HMOX1P09601 288 aa12.47□□□□□ -0.41
UBE2D3-202ENST00000338145 TRMT44Q8IYL2 757 aaKnown RBP12.47□□□□□ -0.41
UBE2D3-202ENST00000338145 FAM174AQ8TBP5 190 aa12.47□□□□□ -0.41
UBE2D3-202ENST00000338145 FOXJ1Q92949 421 aa12.47□□□□□ -0.41
UBE2D3-202ENST00000338145 ARHGAP9Q9BRR9 750 aa12.47□□□□□ -0.41
UBE2D3-202ENST00000338145 RAD21O60216 631 aa12.46□□□□□ -0.41
UBE2D3-202ENST00000338145 EIF6P56537 245 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-202ENST00000338145 AGERQ15109 404 aa12.46□□□□□ -0.41
UBE2D3-202ENST00000338145 CC2D2BQ6DHV5 1058 aa12.46□□□□□ -0.41
UBE2D3-202ENST00000338145 SYNE4Q8N205 404 aa12.46□□□□□ -0.41
UBE2D3-202ENST00000338145 ZNF592Q92610 1267 aa12.46□□□□□ -0.41
UBE2D3-202ENST00000338145 MRGPRX2Q96LB1 330 aa12.46□□□□□ -0.41
UBE2D3-202ENST00000338145 PSMD1Q99460 953 aa12.46□□□□□ -0.41
UBE2D3-202ENST00000338145 ZBBXA8MT70 800 aa12.45□□□□□ -0.42
UBE2D3-202ENST00000338145 GNAT3A8MTJ3 354 aa12.45□□□□□ -0.42
UBE2D3-202ENST00000338145 A1BGP04217 495 aa12.45□□□□□ -0.42
UBE2D3-202ENST00000338145 USP50Q70EL3 339 aaPredicted RBP12.45□□□□□ -0.42
UBE2D3-202ENST00000338145 GAS2L2Q8NHY3 880 aa12.45□□□□□ -0.42
UBE2D3-202ENST00000338145 COG6Q9Y2V7 657 aa12.45□□□□□ -0.42
UBE2D3-202ENST00000338145 TLL2Q9Y6L7 1015 aa12.45□□□□□ -0.42
UBE2D3-202ENST00000338145 THSD7BQ9C0I4 1608 aa12.44□□□□□ -0.42
UBE2D3-202ENST00000338145 SIAH2O43255 324 aa12.44□□□□□ -0.42
UBE2D3-202ENST00000338145 DIAPH1O60610 1272 aaKnown RBP12.44□□□□□ -0.42
UBE2D3-202ENST00000338145 FOXC1Q12948 553 aa12.44□□□□□ -0.42
UBE2D3-202ENST00000338145 C4orf48Q5BLP8 95 aa12.44□□□□□ -0.42
UBE2D3-202ENST00000338145 CYP4F22Q6NT55 531 aa12.44□□□□□ -0.42
UBE2D3-202ENST00000338145 CDV3Q9UKY7 258 aaKnown RBP12.44□□□□□ -0.42
UBE2D3-202ENST00000338145 CACNA1SQ13698 1873 aa12.44□□□□□ -0.42
UBE2D3-202ENST00000338145 EIF4G2P78344 907 aaKnown RBP eCLIP12.43□□□□□ -0.42
UBE2D3-202ENST00000338145 NR1H3Q13133 447 aa12.43□□□□□ -0.42
UBE2D3-202ENST00000338145 WWC1Q8IX03 1113 aa12.43□□□□□ -0.42
UBE2D3-202ENST00000338145 IL17REQ8NFR9 667 aa12.43□□□□□ -0.42
UBE2D3-202ENST00000338145 SNIP1Q8TAD8 396 aaKnown RBP12.43□□□□□ -0.42
UBE2D3-202ENST00000338145 HHIPL1Q96JK4 782 aa12.43□□□□□ -0.42
UBE2D3-202ENST00000338145 MCOLN1Q9GZU1 580 aa12.43□□□□□ -0.42
UBE2D3-202ENST00000338145 GDPD2Q9HCC8 539 aa12.43□□□□□ -0.42
UBE2D3-202ENST00000338145 TOR4AQ9NXH8 423 aa12.43□□□□□ -0.42
UBE2D3-202ENST00000338145 MAP4K5Q9Y4K4 846 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms