RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 ILDR1Q86SU0 546 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF1-201ENST00000337665 ZNF34Q8IZ26 560 aa16.96■□□□□ 0.31
ARHGEF1-201ENST00000337665 TNMDQ9H2S6 317 aa16.96■□□□□ 0.31
ARHGEF1-201ENST00000337665 NRAPQ86VF7 1730 aa16.96■□□□□ 0.31
ARHGEF1-201ENST00000337665 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.3
ARHGEF1-201ENST00000337665 LAMB2P55268 1798 aa16.96■□□□□ 0.3
ARHGEF1-201ENST00000337665 PTMAP06454 111 aaKnown RBP16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 IMMTQ16891 758 aaKnown RBP16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 WASHC4Q2M389 1173 aa16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 ATL3Q6DD88 541 aa16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 FAM200AQ8TCP9 573 aa16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 CARMIL3Q8ND23 1372 aa16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 UBN2Q6ZU65 1347 aa16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 CHMP4CQ96CF2 233 aa16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 GOLGA6L4A6NEF3 574 aa16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 PDE8AO60658 829 aa16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 ADD2P35612 726 aa16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 IL6STP40189 918 aaPredicted RBP16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 ANTXR2P58335 489 aa16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 GPHNQ9NQX3 736 aaPredicted RBP16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 KIF3AQ9Y496 699 aa16.95■□□□□ 0.3
ARHGEF1-201ENST00000337665 NBPF3Q9H094 633 aa16.94■□□□□ 0.3
ARHGEF1-201ENST00000337665 HPS5Q9UPZ3 1129 aa16.94■□□□□ 0.3
ARHGEF1-201ENST00000337665 ECM29Q5VYK3 1845 aa16.94■□□□□ 0.3
ARHGEF1-201ENST00000337665 GPAA1O43292 621 aa16.94■□□□□ 0.3
ARHGEF1-201ENST00000337665 PDE8BO95263 885 aa16.94■□□□□ 0.3
ARHGEF1-201ENST00000337665 ARID4AP29374 1257 aaPredicted RBP16.94■□□□□ 0.3
ARHGEF1-201ENST00000337665 CHD4Q14839 1912 aa16.94■□□□□ 0.3
ARHGEF1-201ENST00000337665 TRMT112Q9UI30 125 aaKnown RBP16.93■□□□□ 0.3
ARHGEF1-201ENST00000337665 CKAP2LQ8IYA6 745 aa16.93■□□□□ 0.3
ARHGEF1-201ENST00000337665 FGFR2P21802 821 aa16.93■□□□□ 0.3
ARHGEF1-201ENST00000337665 HAND2P61296 217 aa16.93■□□□□ 0.3
ARHGEF1-201ENST00000337665 KIAA2012Q0VF49 1180 aa16.93■□□□□ 0.3
ARHGEF1-201ENST00000337665 AK7Q96M32 723 aa16.93■□□□□ 0.3
ARHGEF1-201ENST00000337665 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.93■□□□□ 0.35e-7■■■■□ 19.7
ARHGEF1-201ENST00000337665 PIH1D3Q9NQM4 214 aaKnown RBP16.93■□□□□ 0.3
ARHGEF1-201ENST00000337665 KAT6BQ8WYB5 2073 aa16.92■□□□□ 0.3
ARHGEF1-201ENST00000337665 EXOC5O00471 708 aa16.92■□□□□ 0.3
ARHGEF1-201ENST00000337665 PRC1O43663 620 aa16.92■□□□□ 0.3
ARHGEF1-201ENST00000337665 TTF1Q15361 905 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF1-201ENST00000337665 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
ARHGEF1-201ENST00000337665 CNNM1Q9NRU3 951 aa16.92■□□□□ 0.3
ARHGEF1-201ENST00000337665 UBE3CQ15386 1083 aa16.92■□□□□ 0.3
ARHGEF1-201ENST00000337665 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
ARHGEF1-201ENST00000337665 TCRBV5S4A2TA0A5A2 114 aa16.91■□□□□ 0.3
ARHGEF1-201ENST00000337665 NCOA7Q8NI08 942 aa16.91■□□□□ 0.3
ARHGEF1-201ENST00000337665 BICD2Q8TD16 824 aa16.91■□□□□ 0.3
ARHGEF1-201ENST00000337665 PIBF1Q8WXW3 757 aa16.91■□□□□ 0.3
ARHGEF1-201ENST00000337665 ZNF830Q96NB3 372 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF1-201ENST00000337665 USP28Q96RU2 1077 aa16.91■□□□□ 0.3
ARHGEF1-201ENST00000337665 FTOQ9C0B1 505 aaKnown RBP eCLIP16.91■□□□□ 0.3
ARHGEF1-201ENST00000337665 CBX8Q9HC52 389 aa16.91■□□□□ 0.3
ARHGEF1-201ENST00000337665 ANO6Q4KMQ2 910 aa16.91■□□□□ 0.3
ARHGEF1-201ENST00000337665 SNW1Q13573 536 aaKnown RBP16.91■□□□□ 0.3
ARHGEF1-201ENST00000337665 CCDC102BQ68D86 513 aa16.91■□□□□ 0.3
ARHGEF1-201ENST00000337665 GOLPH3LQ9H4A5 285 aa16.91■□□□□ 0.3
ARHGEF1-201ENST00000337665 BCORQ6W2J9 1755 aa16.9■□□□□ 0.3
ARHGEF1-201ENST00000337665 MYH14Q7Z406 1995 aaKnown RBP16.9■□□□□ 0.3
ARHGEF1-201ENST00000337665 ZNF213O14771 459 aa16.9■□□□□ 0.3
ARHGEF1-201ENST00000337665 EIF5P55010 431 aaKnown RBP16.9■□□□□ 0.3
ARHGEF1-201ENST00000337665 LUZP1Q86V48 1076 aa16.9■□□□□ 0.3
ARHGEF1-201ENST00000337665 RGS22Q8NE09 1264 aa16.9■□□□□ 0.3
ARHGEF1-201ENST00000337665 ENGASEQ8NFI3 743 aa16.9■□□□□ 0.3
ARHGEF1-201ENST00000337665 ZNF396Q96N95 335 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF1-201ENST00000337665 TBC1D2BQ9UPU7 963 aa16.9■□□□□ 0.3
ARHGEF1-201ENST00000337665 FOSBP53539 338 aa16.9■□□□□ 0.3
ARHGEF1-201ENST00000337665 INTS5Q6P9B9 1019 aaKnown RBP16.9■□□□□ 0.3
ARHGEF1-201ENST00000337665 TTC12Q9H892 705 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF1-201ENST00000337665 MROH5Q6ZUA9 1318 aa16.9■□□□□ 0.3
ARHGEF1-201ENST00000337665 CASZ1Q86V15 1759 aa16.89■□□□□ 0.3
ARHGEF1-201ENST00000337665 TIAM2Q8IVF5 1701 aa16.89■□□□□ 0.3
ARHGEF1-201ENST00000337665 PHKA1P46020 1223 aa16.89■□□□□ 0.3
ARHGEF1-201ENST00000337665 SLC9C2Q5TAH2 1124 aa16.89■□□□□ 0.3
ARHGEF1-201ENST00000337665 MPNDQ8N594 471 aa16.89■□□□□ 0.3
ARHGEF1-201ENST00000337665 TDRD7Q8NHU6 1098 aaKnown RBP16.89■□□□□ 0.3
ARHGEF1-201ENST00000337665 NKX2-3Q8TAU0 364 aa16.89■□□□□ 0.3
ARHGEF1-201ENST00000337665 R3HCC1Q9Y3T6 440 aaKnown RBP16.89■□□□□ 0.3
ARHGEF1-201ENST00000337665 A0A1B0GUL6 1792 aa16.89■□□□□ 0.29
ARHGEF1-201ENST00000337665 KLF18A0A0U1RQI7 1052 aa16.89■□□□□ 0.29
ARHGEF1-201ENST00000337665 PUM3Q15397 648 aaKnown RBP16.89■□□□□ 0.29
ARHGEF1-201ENST00000337665 CCAR1Q8IX12 1150 aaKnown RBP16.89■□□□□ 0.29
ARHGEF1-201ENST00000337665 KCNF1Q9H3M0 494 aa16.89■□□□□ 0.29
ARHGEF1-201ENST00000337665 SPTLC3Q9NUV7 552 aa16.89■□□□□ 0.29
ARHGEF1-201ENST00000337665 RTEL1Q9NZ71 1219 aa16.89■□□□□ 0.29
ARHGEF1-201ENST00000337665 UQCRFS1P1P0C7P4 283 aa16.88■□□□□ 0.29
ARHGEF1-201ENST00000337665 CEBPZQ03701 1054 aaKnown RBP16.88■□□□□ 0.29
ARHGEF1-201ENST00000337665 LPIN2Q92539 896 aa16.88■□□□□ 0.29
ARHGEF1-201ENST00000337665 NAP1L2Q9ULW6 460 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF1-201ENST00000337665 COL5A3P25940 1745 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF1-201ENST00000337665 TBC1D10CQ8IV04 446 aa16.88■□□□□ 0.29
ARHGEF1-201ENST00000337665 ZMYM6O95789 1325 aa16.88■□□□□ 0.29
ARHGEF1-201ENST00000337665 ZNF532Q9HCE3 1301 aa16.88■□□□□ 0.29
ARHGEF1-201ENST00000337665 PPFIA3O75145 1194 aa16.87■□□□□ 0.29
ARHGEF1-201ENST00000337665 PDE6AP16499 860 aa16.87■□□□□ 0.29
ARHGEF1-201ENST00000337665 GUCY1B3Q02153 619 aa16.87■□□□□ 0.29
ARHGEF1-201ENST00000337665 SUSD4Q5VX71 490 aa16.87■□□□□ 0.29
ARHGEF1-201ENST00000337665 DHX16O60231 1041 aaKnown RBP16.87■□□□□ 0.29
ARHGEF1-201ENST00000337665 CAVIN2O95810 425 aa16.87■□□□□ 0.29
ARHGEF1-201ENST00000337665 TPM3P06753 285 aa16.87■□□□□ 0.29
ARHGEF1-201ENST00000337665 SASS6Q6UVJ0 657 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms