RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.31■■□□□ 1.96
CLPTM1-201ENST00000337392 ADD2P35612 726 aa27.31■■□□□ 1.96
CLPTM1-201ENST00000337392 PUM3Q15397 648 aaKnown RBP27.31■■□□□ 1.96
CLPTM1-201ENST00000337392 OTUD7BQ6GQQ9 843 aa27.31■■□□□ 1.96
CLPTM1-201ENST00000337392 NSUN7Q8NE18 718 aaKnown RBP27.31■■□□□ 1.96
CLPTM1-201ENST00000337392 TRIM44Q96DX7 344 aaPredicted RBP27.31■■□□□ 1.96
CLPTM1-201ENST00000337392 PTPDC1A2A3K4 754 aa27.31■■□□□ 1.96
CLPTM1-201ENST00000337392 ERFEQ4G0M1 354 aa27.31■■□□□ 1.96
CLPTM1-201ENST00000337392 SRP68Q9UHB9 627 aaKnown RBP27.31■■□□□ 1.96
CLPTM1-201ENST00000337392 ATP6V1DQ9Y5K8 247 aa27.31■■□□□ 1.96
CLPTM1-201ENST00000337392 RXRAP19793 462 aa27.3■■□□□ 1.96
CLPTM1-201ENST00000337392 FGFR2P21802 821 aa27.3■■□□□ 1.96
CLPTM1-201ENST00000337392 CAMK4Q16566 473 aa27.3■■□□□ 1.96
CLPTM1-201ENST00000337392 SPEF2Q9C093 1822 aa27.3■■□□□ 1.96
CLPTM1-201ENST00000337392 PDIA3P30101 505 aaKnown RBP27.3■■□□□ 1.96
CLPTM1-201ENST00000337392 ZMYND15Q9H091 742 aa27.3■■□□□ 1.96
CLPTM1-201ENST00000337392 TOM1O60784 492 aa27.29■■□□□ 1.96
CLPTM1-201ENST00000337392 PDE6AP16499 860 aa27.29■■□□□ 1.96
CLPTM1-201ENST00000337392 LIG1P18858 919 aa27.29■■□□□ 1.96
CLPTM1-201ENST00000337392 H3BQV1 296 aa27.29■■□□□ 1.96
CLPTM1-201ENST00000337392 ANTXR2P58335 489 aa27.29■■□□□ 1.96
CLPTM1-201ENST00000337392 IFFO2Q5TF58 517 aa27.29■■□□□ 1.96
CLPTM1-201ENST00000337392 FAM184AQ8NB25 1140 aa27.29■■□□□ 1.96
CLPTM1-201ENST00000337392 LPIN2Q92539 896 aa27.29■■□□□ 1.96
CLPTM1-201ENST00000337392 PFKFB2O60825 505 aa27.28■■□□□ 1.96
CLPTM1-201ENST00000337392 IMMTQ16891 758 aaKnown RBP27.28■■□□□ 1.96
CLPTM1-201ENST00000337392 TBC1D10CQ8IV04 446 aa27.28■■□□□ 1.96
CLPTM1-201ENST00000337392 MAGEB6Q8N7X4 407 aa27.28■■□□□ 1.96
CLPTM1-201ENST00000337392 TSPY26PQ9H489 355 aa27.28■■□□□ 1.96
CLPTM1-201ENST00000337392 SENP2Q9HC62 589 aa27.28■■□□□ 1.96
CLPTM1-201ENST00000337392 BARGINQ6ZT62 677 aa27.27■■□□□ 1.96
CLPTM1-201ENST00000337392 SPATA5Q8NB90 893 aa27.27■■□□□ 1.96
CLPTM1-201ENST00000337392 PRC1O43663 620 aa27.27■■□□□ 1.96
CLPTM1-201ENST00000337392 PRKAB2O43741 272 aa27.26■■□□□ 1.95
CLPTM1-201ENST00000337392 KRT85P78386 507 aa27.26■■□□□ 1.95
CLPTM1-201ENST00000337392 CHRNDQ07001 517 aa27.26■■□□□ 1.95
CLPTM1-201ENST00000337392 ZNF213O14771 459 aa27.26■■□□□ 1.95
CLPTM1-201ENST00000337392 ZFYP08048 801 aaPredicted RBP27.26■■□□□ 1.95
CLPTM1-201ENST00000337392 PDCP20941 246 aa27.26■■□□□ 1.95
CLPTM1-201ENST00000337392 MIGA1Q8NAN2 632 aa27.26■■□□□ 1.95
CLPTM1-201ENST00000337392 HMGB1P09429 215 aaKnown RBP27.25■■□□□ 1.95
CLPTM1-201ENST00000337392 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.25■■□□□ 1.95
CLPTM1-201ENST00000337392 ARMT1Q9H993 441 aa27.25■■□□□ 1.95
CLPTM1-201ENST00000337392 SMIM22K7EJ46 135 aa27.25■■□□□ 1.95
CLPTM1-201ENST00000337392 ARID4AP29374 1257 aaPredicted RBP27.25■■□□□ 1.95
CLPTM1-201ENST00000337392 CCDC183Q5T5S1 534 aa27.25■■□□□ 1.95
CLPTM1-201ENST00000337392 TBC1D9BQ66K14 1250 aa27.25■■□□□ 1.95
CLPTM1-201ENST00000337392 MYH7P12883 1935 aa27.25■■□□□ 1.95
CLPTM1-201ENST00000337392 BCL9LQ86UU0 1499 aa27.24■■□□□ 1.95
CLPTM1-201ENST00000337392 MROH5Q6ZUA9 1318 aa27.24■■□□□ 1.95
CLPTM1-201ENST00000337392 GYG1P46976 350 aa27.24■■□□□ 1.95
CLPTM1-201ENST00000337392 CCDC173Q0VFZ6 552 aa27.24■■□□□ 1.95
CLPTM1-201ENST00000337392 CCDC152Q4G0S7 254 aa27.24■■□□□ 1.95
CLPTM1-201ENST00000337392 CCDC144CPQ8IYA2 1237 aa27.24■■□□□ 1.95
CLPTM1-201ENST00000337392 SYAP1Q96A49 352 aaPredicted RBP27.24■■□□□ 1.95
CLPTM1-201ENST00000337392 TCRBV5S4A2TA0A5A2 114 aa27.24■■□□□ 1.95
CLPTM1-201ENST00000337392 ESPNB1AK53 854 aa27.24■■□□□ 1.95
CLPTM1-201ENST00000337392 SMARCC2Q8TAQ2 1214 aa27.24■■□□□ 1.95
CLPTM1-201ENST00000337392 ANP32BQ92688 251 aaKnown RBP27.24■■□□□ 1.95
CLPTM1-201ENST00000337392 SPATA32Q96LK8 384 aa27.24■■□□□ 1.95
CLPTM1-201ENST00000337392 AGXT2Q9BYV1 514 aa27.24■■□□□ 1.95
CLPTM1-201ENST00000337392 KLF18A0A0U1RQI7 1052 aa27.23■■□□□ 1.95
CLPTM1-201ENST00000337392 RESTQ13127 1097 aa27.23■■□□□ 1.95
CLPTM1-201ENST00000337392 CYB5R4Q7L1T6 521 aa27.23■■□□□ 1.95
CLPTM1-201ENST00000337392 MB21D2Q8IYB1 491 aaPredicted RBP27.23■■□□□ 1.95
CLPTM1-201ENST00000337392 PPP1R9BQ96SB3 815 aa27.23■■□□□ 1.95
CLPTM1-201ENST00000337392 SLC5A1P13866 664 aa27.23■■□□□ 1.95
CLPTM1-201ENST00000337392 TACC3Q9Y6A5 838 aa27.23■■□□□ 1.95
CLPTM1-201ENST00000337392 MBD4O95243 580 aa27.22■■□□□ 1.95
CLPTM1-201ENST00000337392 FDPSP14324 419 aaKnown RBP27.22■■□□□ 1.95
CLPTM1-201ENST00000337392 IGHMBP2P38935 993 aaKnown RBP27.22■■□□□ 1.95
CLPTM1-201ENST00000337392 CTDSPL2Q05D32 466 aa27.22■■□□□ 1.95
CLPTM1-201ENST00000337392 LEO1Q8WVC0 666 aaPredicted RBP27.22■■□□□ 1.95
CLPTM1-201ENST00000337392 DDX60Q8IY21 1712 aaKnown RBP27.22■■□□□ 1.95
CLPTM1-201ENST00000337392 AIDAQ96BJ3 306 aa27.22■■□□□ 1.95
CLPTM1-201ENST00000337392 EPB41L4AQ9HCS5 686 aaPredicted RBP27.22■■□□□ 1.95
CLPTM1-201ENST00000337392 B4E1Z4 1266 aa27.21■■□□□ 1.95
CLPTM1-201ENST00000337392 PGBD1Q96JS3 809 aa27.21■■□□□ 1.95
CLPTM1-201ENST00000337392 BCL2L12Q9HB09 334 aa27.21■■□□□ 1.95
CLPTM1-201ENST00000337392 CKAP2LQ8IYA6 745 aa27.21■■□□□ 1.95
CLPTM1-201ENST00000337392 CELF1Q92879 486 aaKnown RBP27.21■■□□□ 1.95
CLPTM1-201ENST00000337392 MYL10Q9BUA6 226 aa27.21■■□□□ 1.95
CLPTM1-201ENST00000337392 GOLGA8BA8MQT2 603 aa27.2■■□□□ 1.95
CLPTM1-201ENST00000337392 KLRK1P26718 216 aa27.2■■□□□ 1.95
CLPTM1-201ENST00000337392 LRRFIP1Q32MZ4 808 aaKnown RBP27.2■■□□□ 1.95
CLPTM1-201ENST00000337392 PARP10Q53GL7 1025 aa27.2■■□□□ 1.95
CLPTM1-201ENST00000337392 RALYLQ86SE5 291 aaKnown RBP27.2■■□□□ 1.95
CLPTM1-201ENST00000337392 PODXL2Q9NZ53 605 aa27.2■■□□□ 1.95
CLPTM1-201ENST00000337392 ABCF2Q9UG63 623 aa27.2■■□□□ 1.95
CLPTM1-201ENST00000337392 CTNNA3Q9UI47 895 aa27.2■■□□□ 1.95
CLPTM1-201ENST00000337392 NEDD4P46934 1319 aa27.2■■□□□ 1.95
CLPTM1-201ENST00000337392 UBE2Q2LH0YL09 131 aa27.2■■□□□ 1.94
CLPTM1-201ENST00000337392 GTF2E1P29083 439 aaPredicted RBP27.2■■□□□ 1.94
CLPTM1-201ENST00000337392 HPS5Q9UPZ3 1129 aa27.2■■□□□ 1.94
CLPTM1-201ENST00000337392 GLIPR1L2Q4G1C9 344 aa27.2■■□□□ 1.94
CLPTM1-201ENST00000337392 ADGRA1Q86SQ6 560 aa27.2■■□□□ 1.94
CLPTM1-201ENST00000337392 JAG2Q9Y219 1238 aa27.2■■□□□ 1.94
CLPTM1-201ENST00000337392 PHF14O94880 888 aa27.19■■□□□ 1.94
CLPTM1-201ENST00000337392 AIFM3Q96NN9 605 aa27.19■■□□□ 1.94
CLPTM1-201ENST00000337392 STRBPQ96SI9 672 aaKnown RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms