RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ZNF213O14771 459 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 CTIFO43310 598 aaKnown RBP15.07■□□□□ 0
COL2A1-201ENST00000337299 OPA1O60313 960 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 USO1O60763 962 aaKnown RBP15.07■□□□□ 0
COL2A1-201ENST00000337299 CCDC96Q2M329 555 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 KCNH5Q8NCM2 988 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 NAPGQ99747 312 aaPredicted RBP15.07■□□□□ 0
COL2A1-201ENST00000337299 CEP126Q9P2H0 1117 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 ERCC6L2Q5T890 1561 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 GOLGA8AA7E2F4 631 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 MYO1BO43795 1136 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 BRD3Q15059 726 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 DHX58Q96C10 678 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 KIAA1468Q9P260 1216 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 GOLGA6L10A0A0M3HER8 536 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 RAD21O60216 631 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 TRIM21P19474 475 aaKnown RBP15.07■□□□□ 0
COL2A1-201ENST00000337299 SARNPP82979 210 aaKnown RBP15.07■□□□□ 0
COL2A1-201ENST00000337299 CKAP4Q07065 602 aaKnown RBP15.07■□□□□ 0
COL2A1-201ENST00000337299 EIF4A2Q14240 407 aaKnown RBP15.07■□□□□ 0
COL2A1-201ENST00000337299 FBXO18Q8NFZ0 1043 aa15.07■□□□□ 0
COL2A1-201ENST00000337299 PPP2R5AQ15172 486 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 PSDA5PKW4 1024 aaPredicted RBP15.06■□□□□ 0
COL2A1-201ENST00000337299 ZMYND10O75800 440 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 CWF19L2Q2TBE0 894 aaKnown RBP15.06■□□□□ 0
COL2A1-201ENST00000337299 EXOC4Q96A65 974 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 SAMM50Q9Y512 469 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 MACROD2A1Z1Q3 448 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 AKR1B10O60218 316 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 METAP2P50579 478 aaKnown RBP eCLIP15.06■□□□□ 0
COL2A1-201ENST00000337299 SND1Q7KZF4 910 aaKnown RBP eCLIP15.06■□□□□ 03e-7■■■■■ 27.7
COL2A1-201ENST00000337299 KLHDC4Q8TBB5 520 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 ZHX3Q9H4I2 956 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 YEATS2Q9ULM3 1422 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 GOLGA6BA6NDN3 693 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 PEX19P40855 299 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 ATP1A2P50993 1020 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 CCDC122Q5T0U0 273 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 RRAGBQ5VZM2 374 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 MSL1Q68DK7 614 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 RPAINQ86UA6 219 aa15.06■□□□□ 0
COL2A1-201ENST00000337299 CTCFLQ8NI51 663 aaPredicted RBP15.06■□□□□ 0
COL2A1-201ENST00000337299 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.06■□□□□ 0
COL2A1-201ENST00000337299 A0A1B0GUA9 196 aa15.05■□□□□ 0
COL2A1-201ENST00000337299 EIF3CLB5ME19 914 aaKnown RBP15.05■□□□□ 0
COL2A1-201ENST00000337299 PLEKHF1Q96S99 279 aa15.05■□□□□ 0
COL2A1-201ENST00000337299 EIF3CQ99613 913 aaKnown RBP15.05■□□□□ 0
COL2A1-201ENST00000337299 JPH2Q9BR39 696 aaPredicted RBP15.05■□□□□ 0
COL2A1-201ENST00000337299 PIK3R4Q99570 1358 aa15.05■□□□□ -0
COL2A1-201ENST00000337299 NBPF7P0C2Y1 421 aaPredicted RBP15.05■□□□□ -0
COL2A1-201ENST00000337299 NLRP12P59046 1061 aa15.05■□□□□ -0
COL2A1-201ENST00000337299 GNGT1P63211 74 aa15.05■□□□□ -0
COL2A1-201ENST00000337299 SLF1Q9BQI6 1058 aa15.05■□□□□ -0
COL2A1-201ENST00000337299 VPS16Q9H269 839 aa15.05■□□□□ -0
COL2A1-201ENST00000337299 LUC7LQ9NQ29 371 aaKnown RBP15.05■□□□□ -0
COL2A1-201ENST00000337299 MYO6Q9UM54 1294 aa15.05■□□□□ -0
COL2A1-201ENST00000337299 MTIF2P46199 727 aaKnown RBP15.05■□□□□ -0
COL2A1-201ENST00000337299 DHX32Q7L7V1 743 aaKnown RBP15.05■□□□□ -0
COL2A1-201ENST00000337299 CACNA2D4Q7Z3S7 1137 aa15.05■□□□□ -0
COL2A1-201ENST00000337299 LRRC59Q96AG4 307 aaKnown RBP15.05■□□□□ -0
COL2A1-201ENST00000337299 FANCLQ9NW38 375 aa15.05■□□□□ -0
COL2A1-201ENST00000337299 PTPRTO14522 1441 aa15.05■□□□□ -0
COL2A1-201ENST00000337299 TTC41PQ6P2S7 1318 aa15.04■□□□□ -0
COL2A1-201ENST00000337299 ZNF827Q17R98 1081 aa15.04■□□□□ -0
COL2A1-201ENST00000337299 MTHFSDQ2M296 383 aaKnown RBP15.04■□□□□ -0
COL2A1-201ENST00000337299 POTEDQ86YR6 584 aa15.04■□□□□ -0
COL2A1-201ENST00000337299 RABGGTAQ92696 567 aa15.04■□□□□ -0
COL2A1-201ENST00000337299 ATP5J2-PTCD1G3V325 749 aa15.04■□□□□ -0
COL2A1-201ENST00000337299 KAT6BQ8WYB5 2073 aa15.04■□□□□ -0
COL2A1-201ENST00000337299 PNOCQ13519 176 aa15.04■□□□□ -0
COL2A1-201ENST00000337299 MCMDC2Q4G0Z9 681 aa15.04■□□□□ -0
COL2A1-201ENST00000337299 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.04■□□□□ -0
COL2A1-201ENST00000337299 CEP131Q9UPN4 1083 aa15.04■□□□□ -0
COL2A1-201ENST00000337299 IFIT3O14879 490 aaKnown RBP15.03■□□□□ -0
COL2A1-201ENST00000337299 CCDC172P0C7W6 258 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 LTKP29376 864 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 CFAP58Q5T655 872 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.03■□□□□ -0
COL2A1-201ENST00000337299 NPATQ14207 1427 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 ATP1A3P13637 1013 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 NDUFA8P51970 172 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 UBE3BQ7Z3V4 1068 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 CPLX4Q7Z7G2 160 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 ATP7AQ04656 1500 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 RNASE9P60153 205 aaKnown RBP15.03■□□□□ -0
COL2A1-201ENST00000337299 ATP2B2Q01814 1243 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 ANKRD18AQ8IVF6 992 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 SLC12A7Q9Y666 1083 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 NCOA3Q9Y6Q9 1424 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 ADAMTS2O95450 1211 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 MAGEA9P43362 315 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 CC2D1AQ6P1N0 951 aaPredicted RBP15.03■□□□□ -0
COL2A1-201ENST00000337299 TMEM87AQ8NBN3 555 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 LSG1Q9H089 658 aaKnown RBP15.03■□□□□ -0
COL2A1-201ENST00000337299 ZSWIM6Q9HCJ5 1215 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 MAPK8IP1Q9UQF2 711 aa15.03■□□□□ -0
COL2A1-201ENST00000337299 HGSO14964 777 aaPredicted RBP15.02■□□□□ -0
COL2A1-201ENST00000337299 AP5Z1O43299 807 aa15.02■□□□□ -0
COL2A1-201ENST00000337299 NEFHP12036 1026 aa15.02■□□□□ -0
COL2A1-201ENST00000337299 B4GALNT4Q76KP1 1039 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms