RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 COL22A1Q8NFW1 1626 aaPredicted RBP16.71■□□□□ 0.27
LIPA-202ENST00000336233 GOLGA6L6A8MZA4 724 aa16.71■□□□□ 0.27
LIPA-202ENST00000336233 FGAP02671 866 aa16.71■□□□□ 0.27
LIPA-202ENST00000336233 CCT2P78371 535 aaKnown RBP16.71■□□□□ 0.27
LIPA-202ENST00000336233 WASHC4Q2M389 1173 aa16.71■□□□□ 0.27
LIPA-202ENST00000336233 CKAP2LQ8IYA6 745 aa16.71■□□□□ 0.27
LIPA-202ENST00000336233 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.71■□□□□ 0.27
LIPA-202ENST00000336233 NCOA5Q9HCD5 579 aaKnown RBP16.71■□□□□ 0.27
LIPA-202ENST00000336233 ANKRD18BA2A2Z9 1011 aa16.71■□□□□ 0.26
LIPA-202ENST00000336233 ITGA6P23229 1130 aa16.71■□□□□ 0.26
LIPA-202ENST00000336233 HLFQ16534 295 aa16.71■□□□□ 0.26
LIPA-202ENST00000336233 METTL24Q5JXM2 366 aa16.71■□□□□ 0.26
LIPA-202ENST00000336233 PAXIP1Q6ZW49 1069 aaPredicted RBP16.71■□□□□ 0.26
LIPA-202ENST00000336233 TTC12Q9H892 705 aaPredicted RBP16.71■□□□□ 0.26
LIPA-202ENST00000336233 NAP1L2Q9ULW6 460 aaPredicted RBP16.71■□□□□ 0.26
LIPA-202ENST00000336233 ERVV-1B6SEH8 477 aa16.7■□□□□ 0.26
LIPA-202ENST00000336233 FDPSP14324 419 aaKnown RBP16.7■□□□□ 0.26
LIPA-202ENST00000336233 TTF1Q15361 905 aaPredicted RBP16.7■□□□□ 0.26
LIPA-202ENST00000336233 ILDR1Q86SU0 546 aaPredicted RBP16.7■□□□□ 0.26
LIPA-202ENST00000336233 PUS7LQ9H0K6 701 aaKnown RBP16.7■□□□□ 0.26
LIPA-202ENST00000336233 ZNF330Q9Y3S2 320 aaPredicted RBP16.7■□□□□ 0.26
LIPA-202ENST00000336233 MCAMP43121 646 aa16.7■□□□□ 0.26
LIPA-202ENST00000336233 NOLC1Q14978 699 aaKnown RBP eCLIP16.7■□□□□ 0.26
LIPA-202ENST00000336233 BBXQ8WY36 941 aaPredicted RBP16.7■□□□□ 0.26
LIPA-202ENST00000336233 SLC4A9Q96Q91 983 aa16.7■□□□□ 0.26
LIPA-202ENST00000336233 GREM2Q9H772 168 aa16.7■□□□□ 0.26
LIPA-202ENST00000336233 GPAA1O43292 621 aa16.69■□□□□ 0.26
LIPA-202ENST00000336233 PRC1O43663 620 aa16.69■□□□□ 0.26
LIPA-202ENST00000336233 DHX16O60231 1041 aaKnown RBP16.69■□□□□ 0.26
LIPA-202ENST00000336233 ADD2P35612 726 aa16.69■□□□□ 0.26
LIPA-202ENST00000336233 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.69■□□□□ 0.26
LIPA-202ENST00000336233 LUZP1Q86V48 1076 aa16.69■□□□□ 0.26
LIPA-202ENST00000336233 NCOA7Q8NI08 942 aa16.69■□□□□ 0.26
LIPA-202ENST00000336233 ZNF830Q96NB3 372 aaPredicted RBP16.69■□□□□ 0.26
LIPA-202ENST00000336233 USP28Q96RU2 1077 aa16.69■□□□□ 0.26
LIPA-202ENST00000336233 COL16A1Q07092 1604 aaPredicted RBP16.69■□□□□ 0.26
LIPA-202ENST00000336233 CICQ96RK0 1608 aaPredicted RBP16.69■□□□□ 0.26
LIPA-202ENST00000336233 RREB1Q92766 1687 aa16.69■□□□□ 0.26
LIPA-202ENST00000336233 ANTXR2P58335 489 aa16.69■□□□□ 0.26
LIPA-202ENST00000336233 LDHAL6AQ6ZMR3 332 aa16.69■□□□□ 0.26
LIPA-202ENST00000336233 AK7Q96M32 723 aa16.69■□□□□ 0.26
LIPA-202ENST00000336233 HPS5Q9UPZ3 1129 aa16.69■□□□□ 0.26
LIPA-202ENST00000336233 DOCK2Q92608 1830 aa16.69■□□□□ 0.26
LIPA-202ENST00000336233 ARID4AP29374 1257 aaPredicted RBP16.68■□□□□ 0.26
LIPA-202ENST00000336233 UBE3CQ15386 1083 aa16.68■□□□□ 0.26
LIPA-202ENST00000336233 CHST3Q7LGC8 479 aa16.68■□□□□ 0.26
LIPA-202ENST00000336233 KCNF1Q9H3M0 494 aa16.68■□□□□ 0.26
LIPA-202ENST00000336233 BTG4Q9NY30 223 aa16.68■□□□□ 0.26
LIPA-202ENST00000336233 IRS4O14654 1257 aaPredicted RBP16.68■□□□□ 0.26
LIPA-202ENST00000336233 PDE8AO60658 829 aa16.68■□□□□ 0.26
LIPA-202ENST00000336233 PLA2G4DQ86XP0 818 aa16.68■□□□□ 0.26
LIPA-202ENST00000336233 CCAR1Q8IX12 1150 aaKnown RBP16.68■□□□□ 0.26
LIPA-202ENST00000336233 ENGASEQ8NFI3 743 aa16.68■□□□□ 0.26
LIPA-202ENST00000336233 CCDC85AQ96PX6 553 aaPredicted RBP16.68■□□□□ 0.26
LIPA-202ENST00000336233 RTEL1Q9NZ71 1219 aa16.68■□□□□ 0.26
LIPA-202ENST00000336233 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
LIPA-202ENST00000336233 UQCRHLA0A096LP55 91 aa16.67■□□□□ 0.26
LIPA-202ENST00000336233 UQCRHP07919 91 aa16.67■□□□□ 0.26
LIPA-202ENST00000336233 SNW1Q13573 536 aaKnown RBP16.67■□□□□ 0.26
LIPA-202ENST00000336233 SYNE4Q8N205 404 aa16.67■□□□□ 0.26
LIPA-202ENST00000336233 KIAA1524Q8TCG1 905 aa16.67■□□□□ 0.26
LIPA-202ENST00000336233 DYNC1I1O14576 645 aa16.67■□□□□ 0.26
LIPA-202ENST00000336233 IL6STP40189 918 aaPredicted RBP16.67■□□□□ 0.26
LIPA-202ENST00000336233 FAM160A1Q05DH4 1040 aa16.67■□□□□ 0.26
LIPA-202ENST00000336233 PI16Q6UXB8 463 aa16.67■□□□□ 0.26
LIPA-202ENST00000336233 GOLPH3LQ9H4A5 285 aa16.67■□□□□ 0.26
LIPA-202ENST00000336233 ZMYM6O95789 1325 aa16.67■□□□□ 0.26
LIPA-202ENST00000336233 ZNF213O14771 459 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 PDE8BO95263 885 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 UQCRFS1P1P0C7P4 283 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 GPTP24298 496 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 HAND2P61296 217 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 CCDC73Q6ZRK6 1079 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 PRIMPOLQ96LW4 560 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 CNNM1Q9NRU3 951 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 SLIT2O94813 1529 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 KLF18A0A0U1RQI7 1052 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 A0A1W2PQ27 194 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 A0A1W2PQ64 194 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 A0A1W2PQD8 194 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 CDC25BP30305 580 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 ZNF165P49910 485 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 ZNF75DP51815 510 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 PLCB2Q00722 1185 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 RALYLQ86SE5 291 aaKnown RBP16.66■□□□□ 0.26
LIPA-202ENST00000336233 ZNF34Q8IZ26 560 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 FTOQ9C0B1 505 aaKnown RBP eCLIP16.66■□□□□ 0.26
LIPA-202ENST00000336233 NBPF3Q9H094 633 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 GPHNQ9NQX3 736 aaPredicted RBP16.66■□□□□ 0.26
LIPA-202ENST00000336233 ZBTB1Q9Y2K1 713 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 TIAM2Q8IVF5 1701 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 LAMB2P55268 1798 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 GOLGA8BA8MQT2 603 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 STX1AQ16623 288 aa16.66■□□□□ 0.26
LIPA-202ENST00000336233 FGFR2P21802 821 aa16.65■□□□□ 0.26
LIPA-202ENST00000336233 SARM1Q6SZW1 724 aa16.65■□□□□ 0.26
LIPA-202ENST00000336233 BRAPQ7Z569 592 aa16.65■□□□□ 0.26
LIPA-202ENST00000336233 MPNDQ8N594 471 aa16.65■□□□□ 0.26
LIPA-202ENST00000336233 DNAJC25Q9H1X3 360 aa16.65■□□□□ 0.26
LIPA-202ENST00000336233 PIH1D3Q9NQM4 214 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms