RNA–Protein interactions for RNA: ENST00000335221.9

BPTF-203, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5 BASIC

Gene BPTF, Length 2,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-203ENST00000335221 SH3BP5O60239 455 aa10.05□□□□□ -0.8
BPTF-203ENST00000335221 TRIM21P19474 475 aaKnown RBP10.05□□□□□ -0.8
BPTF-203ENST00000335221 NSUN2Q08J23 767 aaKnown RBP eCLIP10.05□□□□□ -0.8
BPTF-203ENST00000335221 MYBPC3Q14896 1274 aa10.05□□□□□ -0.8
BPTF-203ENST00000335221 SLC4A8Q2Y0W8 1093 aa10.05□□□□□ -0.8
BPTF-203ENST00000335221 GALNT17Q6IS24 598 aa10.05□□□□□ -0.8
BPTF-203ENST00000335221 TRIM58Q8NG06 486 aa10.05□□□□□ -0.8
BPTF-203ENST00000335221 CLIC6Q96NY7 704 aa10.05□□□□□ -0.8
BPTF-203ENST00000335221 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.05□□□□□ -0.83e-31■■■□□ 17.5
BPTF-203ENST00000335221 TRIM5Q9C035 493 aa10.05□□□□□ -0.8
BPTF-203ENST00000335221 KDRP35968 1356 aa10.05□□□□□ -0.8
BPTF-203ENST00000335221 GNAT1P11488 350 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 SLC8A1P32418 973 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 CUL4BQ13620 913 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 FXNQ16595 210 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 GNPTABQ3T906 1256 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 GPR161Q8N6U8 529 aaKnown RBP10.04□□□□□ -0.8
BPTF-203ENST00000335221 BRD8Q9H0E9 1235 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 ZCWPW1Q9H0M4 648 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 ZNHIT6Q9NWK9 470 aaKnown RBP10.04□□□□□ -0.8
BPTF-203ENST00000335221 SWAP70Q9UH65 585 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 ZMYM4Q5VZL5 1548 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 KIAA0556O60303 1618 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 GOLGA6L9A6NEM1 432 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 HMMRO75330 724 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 FSBPO95073 299 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 PARP1P09874 1014 aaKnown RBP10.04□□□□□ -0.8
BPTF-203ENST00000335221 LONRF2Q1L5Z9 754 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.04□□□□□ -0.8
BPTF-203ENST00000335221 SLF2Q8IX21 1173 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 CCDC170Q8IYT3 715 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 RSPH1Q8WYR4 309 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 SLC35B4Q969S0 331 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 HOOK2Q96ED9 719 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 RBM33Q96EV2 1170 aaKnown RBP10.04□□□□□ -0.8
BPTF-203ENST00000335221 NLRP2Q9NX02 1062 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 MKS1Q9NXB0 559 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 CHIC2Q9UKJ5 165 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 HFM1A2PYH4 1435 aa10.04□□□□□ -0.8
BPTF-203ENST00000335221 FNTAP49354 379 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 CLCN2P51788 898 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 EVCP57679 992 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 CCDC57Q2TAC2 916 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 SMYD1Q8NB12 490 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 PANK1Q8TE04 598 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 SPIRE2Q8WWL2 714 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 CCDC102AQ96A19 550 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 XAGE2Q96GT9 111 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 SPAG5Q96R06 1193 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 GPBP1L1Q9HC44 474 aaPredicted RBP10.03□□□□□ -0.8
BPTF-203ENST00000335221 TPCN1Q9ULQ1 816 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 ZNF510Q9Y2H8 683 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 NAIPQ13075 1403 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 CEP170Q5SW79 1584 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 PTPN23Q9H3S7 1636 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 SETD1BQ9UPS6 1966 aaKnown RBP10.03□□□□□ -0.8
BPTF-203ENST00000335221 AATKQ6ZMQ8 1374 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 MAP2K7O14733 419 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 ZSCAN12O43309 604 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 SMIM24O75264 130 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 PABPC4Q13310 644 aaKnown RBP eCLIP10.03□□□□□ -0.8
BPTF-203ENST00000335221 CCAR2Q8N163 923 aaKnown RBP10.03□□□□□ -0.8
BPTF-203ENST00000335221 FAM71BQ8TC56 605 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 JAKMIP2Q96AA8 810 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 CCDC85AQ96PX6 553 aaPredicted RBP10.03□□□□□ -0.8
BPTF-203ENST00000335221 SENP2Q9HC62 589 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 AATFQ9NY61 560 aaKnown RBP eCLIP10.03□□□□□ -0.8
BPTF-203ENST00000335221 CORO1CQ9ULV4 474 aaPredicted RBP10.03□□□□□ -0.8
BPTF-203ENST00000335221 PCDHB15Q9Y5E8 787 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 MAGI1Q96QZ7 1491 aaPredicted RBP10.03□□□□□ -0.8
BPTF-203ENST00000335221 CYP27B1O15528 508 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 PHACTR2O75167 634 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 SMTNP53814 917 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 GUCY1B3Q02153 619 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 KRT72Q14CN4 511 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 HDXQ7Z353 690 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 NANOGNBQ7Z5D8 188 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 LRRC8AQ8IWT6 810 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 ZGPATQ8N5A5 531 aaKnown RBP10.03□□□□□ -0.8
BPTF-203ENST00000335221 DDX12PQ92771 950 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 FAM204AQ9H8W3 233 aa10.03□□□□□ -0.8
BPTF-203ENST00000335221 SYNJ2O15056 1496 aa10.02□□□□□ -0.81
BPTF-203ENST00000335221 NUP153P49790 1475 aaKnown RBP10.02□□□□□ -0.81
BPTF-203ENST00000335221 PDLIM1O00151 329 aa10.02□□□□□ -0.81
BPTF-203ENST00000335221 GADD45BO75293 160 aaPredicted RBP10.02□□□□□ -0.81
BPTF-203ENST00000335221 TADA3O75528 432 aa10.02□□□□□ -0.81
BPTF-203ENST00000335221 SMNDC1O75940 238 aaKnown RBP eCLIP10.02□□□□□ -0.81
BPTF-203ENST00000335221 ALOX15P16050 662 aaPredicted RBP10.02□□□□□ -0.81
BPTF-203ENST00000335221 HDAC4P56524 1084 aa10.02□□□□□ -0.81
BPTF-203ENST00000335221 TSR1Q2NL82 804 aaKnown RBP10.02□□□□□ -0.81
BPTF-203ENST00000335221 BZW1Q7L1Q6 419 aaKnown RBP10.02□□□□□ -0.81
BPTF-203ENST00000335221 MAGEC3Q8TD91 643 aa10.02□□□□□ -0.81
BPTF-203ENST00000335221 HELLSQ9NRZ9 838 aa10.02□□□□□ -0.81
BPTF-203ENST00000335221 RRP7BPQ9NSQ0 103 aa10.02□□□□□ -0.81
BPTF-203ENST00000335221 TRPC6Q9Y210 931 aa10.02□□□□□ -0.81
BPTF-203ENST00000335221 A0A1B0GVG6 124 aa10.02□□□□□ -0.81
BPTF-203ENST00000335221 B4DLN1 442 aa10.02□□□□□ -0.81
BPTF-203ENST00000335221 TUBB4AP04350 444 aa10.02□□□□□ -0.81
BPTF-203ENST00000335221 ARHGAP25P42331 645 aa10.02□□□□□ -0.81
BPTF-203ENST00000335221 SMUG1Q53HV7 270 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms