RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 CCDC102BQ68D86 513 aa18.63■□□□□ 0.57
SYNM-201ENST00000328642 LUZP1Q86V48 1076 aa18.63■□□□□ 0.57
SYNM-201ENST00000328642 CEP57L1Q8IYX8 460 aa18.63■□□□□ 0.57
SYNM-201ENST00000328642 APPBP2Q92624 585 aa18.63■□□□□ 0.57
SYNM-201ENST00000328642 RRAGDQ9NQL2 400 aaPredicted RBP18.63■□□□□ 0.57
SYNM-201ENST00000328642 ATG3Q9NT62 314 aa18.63■□□□□ 0.57
SYNM-201ENST00000328642 MCM9Q9NXL9 1143 aa18.63■□□□□ 0.57
SYNM-201ENST00000328642 ADD1P35611 737 aaKnown RBP18.62■□□□□ 0.57
SYNM-201ENST00000328642 NOC3LQ8WTT2 800 aaKnown RBP18.62■□□□□ 0.57
SYNM-201ENST00000328642 INCENPQ9NQS7 918 aa18.62■□□□□ 0.57
SYNM-201ENST00000328642 AOX1Q06278 1338 aa18.62■□□□□ 0.57
SYNM-201ENST00000328642 FTOQ9C0B1 505 aaKnown RBP eCLIP18.62■□□□□ 0.57
SYNM-201ENST00000328642 COL3A1P02461 1466 aaPredicted RBP18.62■□□□□ 0.57
SYNM-201ENST00000328642 PUM3Q15397 648 aaKnown RBP18.62■□□□□ 0.57
SYNM-201ENST00000328642 AATFQ9NY61 560 aaKnown RBP eCLIP18.62■□□□□ 0.57
SYNM-201ENST00000328642 SRP68Q9UHB9 627 aaKnown RBP18.62■□□□□ 0.57
SYNM-201ENST00000328642 MAP3K15Q6ZN16 1313 aa18.61■□□□□ 0.57
SYNM-201ENST00000328642 USPL1Q5W0Q7 1092 aa18.61■□□□□ 0.57
SYNM-201ENST00000328642 MAP4K1Q92918 833 aa18.61■□□□□ 0.57
SYNM-201ENST00000328642 HAUS7Q99871 368 aa18.61■□□□□ 0.57
SYNM-201ENST00000328642 GJB4Q9NTQ9 266 aa18.61■□□□□ 0.57
SYNM-201ENST00000328642 SAP30BPQ9UHR5 308 aaKnown RBP18.61■□□□□ 0.57
SYNM-201ENST00000328642 TAF6LQ9Y6J9 622 aa18.61■□□□□ 0.57
SYNM-201ENST00000328642 MAGEB6P1A0A0J9YX57 407 aa18.61■□□□□ 0.57
SYNM-201ENST00000328642 OSBP2Q969R2 916 aa18.61■□□□□ 0.57
SYNM-201ENST00000328642 MYOM1P52179 1685 aa18.61■□□□□ 0.57
SYNM-201ENST00000328642 NLRP5P59047 1200 aa18.61■□□□□ 0.57
SYNM-201ENST00000328642 CFAP100Q494V2 611 aa18.61■□□□□ 0.57
SYNM-201ENST00000328642 NLRP10Q86W26 655 aa18.61■□□□□ 0.57
SYNM-201ENST00000328642 C17orf53Q8N3J3 647 aaPredicted RBP18.61■□□□□ 0.57
SYNM-201ENST00000328642 TMX1Q9H3N1 280 aa18.6■□□□□ 0.57
SYNM-201ENST00000328642 DIP2AQ14689 1571 aa18.6■□□□□ 0.57
SYNM-201ENST00000328642 CATIPQ7Z7H3 387 aa18.6■□□□□ 0.57
SYNM-201ENST00000328642 UIMC1Q96RL1 719 aa18.6■□□□□ 0.57
SYNM-201ENST00000328642 SPATA31D1Q6ZQQ2 1576 aa18.6■□□□□ 0.57
SYNM-201ENST00000328642 DLC1Q96QB1 1528 aa18.6■□□□□ 0.57
SYNM-201ENST00000328642 RTN1Q16799 776 aa18.59■□□□□ 0.57
SYNM-201ENST00000328642 SPATA5Q8NB90 893 aa18.59■□□□□ 0.57
SYNM-201ENST00000328642 PUS7LQ9H0K6 701 aaKnown RBP18.59■□□□□ 0.57
SYNM-201ENST00000328642 HELLSQ9NRZ9 838 aa18.59■□□□□ 0.57
SYNM-201ENST00000328642 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.59■□□□□ 0.57
SYNM-201ENST00000328642 ATP10DQ9P241 1426 aa18.59■□□□□ 0.57
SYNM-201ENST00000328642 PCCAP05165 728 aaPredicted RBP18.59■□□□□ 0.57
SYNM-201ENST00000328642 CNNM3Q8NE01 707 aa18.59■□□□□ 0.57
SYNM-201ENST00000328642 ZSWIM6Q9HCJ5 1215 aa18.59■□□□□ 0.57
SYNM-201ENST00000328642 RICTORQ6R327 1708 aa18.59■□□□□ 0.57
SYNM-201ENST00000328642 AFMP43652 599 aa18.58■□□□□ 0.57
SYNM-201ENST00000328642 IFIT1BQ5T764 474 aaKnown RBP18.58■□□□□ 0.57
SYNM-201ENST00000328642 CPLX3Q8WVH0 158 aa18.58■□□□□ 0.57
SYNM-201ENST00000328642 RNF41Q9H4P4 317 aaPredicted RBP18.58■□□□□ 0.57
SYNM-201ENST00000328642 LIG1P18858 919 aa18.58■□□□□ 0.57
SYNM-201ENST00000328642 TRAPPC3LQ5T215 181 aa18.58■□□□□ 0.57
SYNM-201ENST00000328642 LPIN2Q92539 896 aa18.58■□□□□ 0.57
SYNM-201ENST00000328642 MTMR6Q9Y217 621 aa18.58■□□□□ 0.57
SYNM-201ENST00000328642 PRKAB2O43741 272 aa18.58■□□□□ 0.56
SYNM-201ENST00000328642 EIF6P56537 245 aaKnown RBP18.58■□□□□ 0.56
SYNM-201ENST00000328642 SCARF1Q14162 830 aa18.58■□□□□ 0.56
SYNM-201ENST00000328642 M0R2C6 588 aa18.57■□□□□ 0.56
SYNM-201ENST00000328642 PDIA6Q15084 440 aa18.57■□□□□ 0.56
SYNM-201ENST00000328642 SUSD4Q5VX71 490 aa18.57■□□□□ 0.56
SYNM-201ENST00000328642 SOGA3Q5TF21 947 aa18.57■□□□□ 0.56
SYNM-201ENST00000328642 CRACR2BQ8N4Y2 399 aaPredicted RBP18.57■□□□□ 0.56
SYNM-201ENST00000328642 GPR101Q96P66 508 aaPredicted RBP18.57■□□□□ 0.56
SYNM-201ENST00000328642 KCNJ14Q9UNX9 436 aa18.57■□□□□ 0.56
SYNM-201ENST00000328642 PDE8BO95263 885 aa18.57■□□□□ 0.56
SYNM-201ENST00000328642 TPM3P06753 285 aa18.57■□□□□ 0.56
SYNM-201ENST00000328642 PDE6AP16499 860 aa18.57■□□□□ 0.56
SYNM-201ENST00000328642 MSL1Q68DK7 614 aa18.57■□□□□ 0.56
SYNM-201ENST00000328642 TECPR2O15040 1411 aa18.57■□□□□ 0.56
SYNM-201ENST00000328642 C16orf45Q96MC5 204 aaPredicted RBP18.57■□□□□ 0.56
SYNM-201ENST00000328642 NRKQ7Z2Y5 1582 aa18.56■□□□□ 0.56
SYNM-201ENST00000328642 MAST3O60307 1309 aa18.56■□□□□ 0.56
SYNM-201ENST00000328642 TSR1Q2NL82 804 aaKnown RBP18.56■□□□□ 0.56
SYNM-201ENST00000328642 TTLL11Q8NHH1 800 aa18.56■□□□□ 0.56
SYNM-201ENST00000328642 ESR2Q92731 530 aa18.56■□□□□ 0.56
SYNM-201ENST00000328642 PLIN2Q99541 437 aa18.56■□□□□ 0.56
SYNM-201ENST00000328642 DDX19AQ9NUU7 478 aaKnown RBP18.56■□□□□ 0.56
SYNM-201ENST00000328642 CLIP2Q9UDT6 1046 aa18.56■□□□□ 0.56
SYNM-201ENST00000328642 CCDC196A0A1B0GTZ2 297 aa18.56■□□□□ 0.56
SYNM-201ENST00000328642 H7C1W4 665 aa18.56■□□□□ 0.56
SYNM-201ENST00000328642 TYRO3Q06418 890 aa18.56■□□□□ 0.56
SYNM-201ENST00000328642 FAM47AQ5JRC9 791 aa18.56■□□□□ 0.56
SYNM-201ENST00000328642 KAZALD1Q96I82 304 aa18.56■□□□□ 0.56
SYNM-201ENST00000328642 CCDC96Q2M329 555 aa18.55■□□□□ 0.56
SYNM-201ENST00000328642 TTC6Q86TZ1 520 aa18.55■□□□□ 0.56
SYNM-201ENST00000328642 ZBTB9Q96C00 473 aa18.55■□□□□ 0.56
SYNM-201ENST00000328642 LMOD1P29536 600 aaPredicted RBP18.55■□□□□ 0.56
SYNM-201ENST00000328642 CNBD1Q8NA66 436 aa18.55■□□□□ 0.56
SYNM-201ENST00000328642 CRNKL1Q9BZJ0 848 aaKnown RBP18.55■□□□□ 0.56
SYNM-201ENST00000328642 ZSCAN16Q9H4T2 348 aaPredicted RBP18.55■□□□□ 0.56
SYNM-201ENST00000328642 CHRNDQ07001 517 aa18.55■□□□□ 0.56
SYNM-201ENST00000328642 CCDC186Q7Z3E2 898 aa18.55■□□□□ 0.56
SYNM-201ENST00000328642 NOL7Q9UMY1 257 aaKnown RBP18.55■□□□□ 0.56
SYNM-201ENST00000328642 A0A0G2JLW4 131 aa18.54■□□□□ 0.56
SYNM-201ENST00000328642 TPM1P09493 284 aa18.54■□□□□ 0.56
SYNM-201ENST00000328642 CTDP1Q9Y5B0 961 aaPredicted RBP18.54■□□□□ 0.56
SYNM-201ENST00000328642 CYP2D7A0A087X1C5 515 aa18.54■□□□□ 0.56
SYNM-201ENST00000328642 SPTLC2O15270 562 aa18.54■□□□□ 0.56
SYNM-201ENST00000328642 SCRN1Q12765 414 aa18.54■□□□□ 0.56
SYNM-201ENST00000328642 UQCRHLA0A096LP55 91 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms