RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 SLC7A3Q8WY07 619 aa6.76□□□□□ -1.33
SKP1-201ENST00000328392 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
SKP1-201ENST00000328392 SOX1O00570 391 aaPredicted RBP6.75□□□□□ -1.33
SKP1-201ENST00000328392 CABP4P57796 275 aa6.75□□□□□ -1.33
SKP1-201ENST00000328392 UBASH3BQ8TF42 649 aa6.75□□□□□ -1.33
SKP1-201ENST00000328392 BSNDQ8WZ55 320 aa6.75□□□□□ -1.33
SKP1-201ENST00000328392 KRTAP4-6Q9BYQ5 205 aa6.75□□□□□ -1.33
SKP1-201ENST00000328392 BHLHE41Q9C0J9 482 aaPredicted RBP6.75□□□□□ -1.33
SKP1-201ENST00000328392 SEC31BQ9NQW1 1179 aa6.75□□□□□ -1.33
SKP1-201ENST00000328392 ANKRD33BA6NCL7 494 aa6.74□□□□□ -1.33
SKP1-201ENST00000328392 FAM177BA6PVY3 158 aa6.74□□□□□ -1.33
SKP1-201ENST00000328392 NLRP12P59046 1061 aa6.74□□□□□ -1.33
SKP1-201ENST00000328392 PIP4K2BP78356 416 aa6.74□□□□□ -1.33
SKP1-201ENST00000328392 PDE3BQ13370 1112 aa6.74□□□□□ -1.33
SKP1-201ENST00000328392 SPRED3Q2MJR0 410 aa6.74□□□□□ -1.33
SKP1-201ENST00000328392 KIAA1211Q6ZU35 1233 aa6.74□□□□□ -1.33
SKP1-201ENST00000328392 ACAD11Q709F0 780 aa6.74□□□□□ -1.33
SKP1-201ENST00000328392 DZIP1LQ8IYY4 767 aaKnown RBP6.74□□□□□ -1.33
SKP1-201ENST00000328392 KLHL23Q8NBE8 558 aa6.74□□□□□ -1.33
SKP1-201ENST00000328392 CITED4Q96RK1 184 aa6.74□□□□□ -1.33
SKP1-201ENST00000328392 TCF12Q99081 682 aa6.74□□□□□ -1.33
SKP1-201ENST00000328392 GRIA4P48058 902 aa6.73□□□□□ -1.33
SKP1-201ENST00000328392 RBM25P49756 843 aaKnown RBP6.73□□□□□ -1.33
SKP1-201ENST00000328392 DUOXA2Q1HG44 320 aa6.73□□□□□ -1.33
SKP1-201ENST00000328392 TMC7Q7Z402 723 aa6.73□□□□□ -1.33
SKP1-201ENST00000328392 NPM2Q86SE8 214 aaKnown RBP6.73□□□□□ -1.33
SKP1-201ENST00000328392 UBL7Q96S82 380 aaPredicted RBP6.73□□□□□ -1.33
SKP1-201ENST00000328392 RBCK1Q9BYM8 510 aa6.73□□□□□ -1.33
SKP1-201ENST00000328392 NPHS2Q9NP85 383 aa6.73□□□□□ -1.33
SKP1-201ENST00000328392 DCTN4Q9UJW0 460 aa6.73□□□□□ -1.33
SKP1-201ENST00000328392 EIF1AYO14602 144 aaKnown RBP6.72□□□□□ -1.33
SKP1-201ENST00000328392 CPNE3O75131 537 aaKnown RBP6.72□□□□□ -1.33
SKP1-201ENST00000328392 H2AFB1P0C5Y9 115 aa6.72□□□□□ -1.33
SKP1-201ENST00000328392 H2AFB2P0C5Z0 115 aa6.72□□□□□ -1.33
SKP1-201ENST00000328392 GLB1P16278 677 aa6.72□□□□□ -1.33
SKP1-201ENST00000328392 IKBKEQ14164 716 aa6.72□□□□□ -1.33
SKP1-201ENST00000328392 PRSS36Q5K4E3 855 aa6.72□□□□□ -1.33
SKP1-201ENST00000328392 DNAJC14Q6Y2X3 702 aaPredicted RBP6.72□□□□□ -1.33
SKP1-201ENST00000328392 Q6ZS46 218 aa6.72□□□□□ -1.33
SKP1-201ENST00000328392 CCNJLQ8IV13 435 aa6.72□□□□□ -1.33
SKP1-201ENST00000328392 DCAF11Q8TEB1 546 aa6.72□□□□□ -1.33
SKP1-201ENST00000328392 WNT8BQ93098 351 aa6.72□□□□□ -1.33
SKP1-201ENST00000328392 LIN7BQ9HAP6 207 aa6.72□□□□□ -1.33
SKP1-201ENST00000328392 OSGEPQ9NPF4 335 aa6.72□□□□□ -1.33
SKP1-201ENST00000328392 A0A096LPE4 126 aa6.71□□□□□ -1.34
SKP1-201ENST00000328392 A0A1W2PPZ6 126 aa6.71□□□□□ -1.34
SKP1-201ENST00000328392 NEFLP07196 543 aa6.71□□□□□ -1.34
SKP1-201ENST00000328392 ESRRAP11474 423 aaPredicted RBP6.71□□□□□ -1.34
SKP1-201ENST00000328392 C19orf57Q0VDD7 668 aa6.71□□□□□ -1.34
SKP1-201ENST00000328392 CCDC74AQ96AQ1 378 aa6.71□□□□□ -1.34
SKP1-201ENST00000328392 CSRNP1Q96S65 589 aa6.71□□□□□ -1.34
SKP1-201ENST00000328392 ZNF423Q2M1K9 1284 aa6.7□□□□□ -1.34
SKP1-201ENST00000328392 KIAA0319Q5VV43 1072 aa6.7□□□□□ -1.34
SKP1-201ENST00000328392 EPS8L3Q8TE67 593 aaKnown RBP6.7□□□□□ -1.34
SKP1-201ENST00000328392 DLGAP3O95886 979 aa6.69□□□□□ -1.34
SKP1-201ENST00000328392 ARL4DP49703 201 aa6.69□□□□□ -1.34
SKP1-201ENST00000328392 PI16Q6UXB8 463 aa6.69□□□□□ -1.34
SKP1-201ENST00000328392 ZSCAN29Q8IWY8 852 aaPredicted RBP6.69□□□□□ -1.34
SKP1-201ENST00000328392 ALKBH8Q96BT7 664 aaKnown RBP6.69□□□□□ -1.34
SKP1-201ENST00000328392 DMRTB1Q96MA1 342 aa6.69□□□□□ -1.34
SKP1-201ENST00000328392 EHD4Q9H223 541 aa6.69□□□□□ -1.34
SKP1-201ENST00000328392 GSTM4Q03013 218 aa6.68□□□□□ -1.34
SKP1-201ENST00000328392 PCDH1Q08174 1060 aa6.68□□□□□ -1.34
SKP1-201ENST00000328392 DSC3Q14574 896 aa6.68□□□□□ -1.34
SKP1-201ENST00000328392 PRR23CQ6ZRP0 262 aa6.68□□□□□ -1.34
SKP1-201ENST00000328392 ARMC10Q8N2F6 343 aa6.68□□□□□ -1.34
SKP1-201ENST00000328392 ASB16Q96NS5 453 aa6.68□□□□□ -1.34
SKP1-201ENST00000328392 BCL2L13Q9BXK5 485 aa6.68□□□□□ -1.34
SKP1-201ENST00000328392 USP26Q9BXU7 913 aa6.68□□□□□ -1.34
SKP1-201ENST00000328392 DNAJC25Q9H1X3 360 aa6.68□□□□□ -1.34
SKP1-201ENST00000328392 GADD45BO75293 160 aaPredicted RBP6.67□□□□□ -1.34
SKP1-201ENST00000328392 MAPK8P45983 427 aa6.67□□□□□ -1.34
SKP1-201ENST00000328392 TAGLNQ01995 201 aaKnown RBP6.67□□□□□ -1.34
SKP1-201ENST00000328392 GIPC2Q8TF65 315 aa6.67□□□□□ -1.34
SKP1-201ENST00000328392 RUSC1Q9BVN2 902 aa6.67□□□□□ -1.34
SKP1-201ENST00000328392 CLEC4MQ9H2X3 399 aaPredicted RBP6.67□□□□□ -1.34
SKP1-201ENST00000328392 LOC100289279A0A1B0GTE1 492 aa6.66□□□□□ -1.34
SKP1-201ENST00000328392 PLCB3Q01970 1234 aa6.66□□□□□ -1.34
SKP1-201ENST00000328392 GRM2Q14416 872 aa6.66□□□□□ -1.34
SKP1-201ENST00000328392 ZMYM1Q5SVZ6 1142 aa6.66□□□□□ -1.34
SKP1-201ENST00000328392 NPAS4Q8IUM7 802 aa6.66□□□□□ -1.34
SKP1-201ENST00000328392 GLIS3Q8NEA6 775 aa6.66□□□□□ -1.34
SKP1-201ENST00000328392 FAM46AQ96IP4 442 aaKnown RBP6.66□□□□□ -1.34
SKP1-201ENST00000328392 NRSN2Q9GZP1 204 aa6.66□□□□□ -1.34
SKP1-201ENST00000328392 SOX17Q9H6I2 414 aaPredicted RBP6.66□□□□□ -1.34
SKP1-201ENST00000328392 ABCB6Q9NP58 842 aa6.66□□□□□ -1.34
SKP1-201ENST00000328392 PNMA6FA0A0J9YX94 578 aa6.65□□□□□ -1.34
SKP1-201ENST00000328392 TREHO43280 583 aa6.65□□□□□ -1.34
SKP1-201ENST00000328392 P4HBP07237 508 aaKnown RBP6.65□□□□□ -1.34
SKP1-201ENST00000328392 CTSBP07858 339 aa6.65□□□□□ -1.34
SKP1-201ENST00000328392 ITPKAP23677 461 aa6.65□□□□□ -1.34
SKP1-201ENST00000328392 PREPP48147 710 aa6.65□□□□□ -1.34
SKP1-201ENST00000328392 SETDB2Q96T68 719 aa6.65□□□□□ -1.34
SKP1-201ENST00000328392 CEP41Q9BYV8 373 aa6.65□□□□□ -1.34
SKP1-201ENST00000328392 RNF208Q9H0X6 261 aa6.65□□□□□ -1.34
SKP1-201ENST00000328392 ZNF576Q9H609 170 aa6.65□□□□□ -1.34
SKP1-201ENST00000328392 TMEM238LA0A1B0GVL6 79 aa6.64□□□□□ -1.35
SKP1-201ENST00000328392 ECEL1O95672 775 aa6.64□□□□□ -1.35
SKP1-201ENST00000328392 PRPF40BQ6NWY9 871 aaKnown RBP6.64□□□□□ -1.35
SKP1-201ENST00000328392 Q8N3U1 123 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms