RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 PRPHP41219 470 aa18.54■□□□□ 0.56
SMAD3-201ENST00000327367 WTAPQ15007 396 aa18.54■□□□□ 0.56
SMAD3-201ENST00000327367 RTEL1-TNFRSF6BF6WH68 1400 aa18.54■□□□□ 0.56
SMAD3-201ENST00000327367 RPSAP08865 295 aaKnown RBP18.54■□□□□ 0.56
SMAD3-201ENST00000327367 CPA1P15085 419 aa18.54■□□□□ 0.56
SMAD3-201ENST00000327367 ALDH3A1P30838 453 aa18.54■□□□□ 0.56
SMAD3-201ENST00000327367 FYB2Q5VWT5 728 aa18.54■□□□□ 0.56
SMAD3-201ENST00000327367 SMC5Q8IY18 1101 aa18.54■□□□□ 0.56
SMAD3-201ENST00000327367 KIAA1107Q9UPP5 1409 aa18.54■□□□□ 0.56
SMAD3-201ENST00000327367 CALCOCO2Q13137 446 aa18.54■□□□□ 0.56
SMAD3-201ENST00000327367 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
SMAD3-201ENST00000327367 PLEKHH2Q8IVE3 1493 aa18.54■□□□□ 0.56
SMAD3-201ENST00000327367 PPP1R21Q6ZMI0 780 aa18.54■□□□□ 0.56
SMAD3-201ENST00000327367 RNF10Q8N5U6 811 aaKnown RBP18.54■□□□□ 0.56
SMAD3-201ENST00000327367 MKRN1Q9UHC7 482 aaKnown RBP18.54■□□□□ 0.56
SMAD3-201ENST00000327367 RNF168Q8IYW5 571 aaPredicted RBP18.54■□□□□ 0.56
SMAD3-201ENST00000327367 KLHL7Q8IXQ5 586 aa18.53■□□□□ 0.56
SMAD3-201ENST00000327367 RABGAP1Q9Y3P9 1069 aa18.53■□□□□ 0.56
SMAD3-201ENST00000327367 GPTP24298 496 aa18.53■□□□□ 0.56
SMAD3-201ENST00000327367 AP1ARQ63HQ0 302 aa18.53■□□□□ 0.56
SMAD3-201ENST00000327367 ARHGAP25P42331 645 aa18.53■□□□□ 0.56
SMAD3-201ENST00000327367 SESN3P58005 492 aa18.53■□□□□ 0.56
SMAD3-201ENST00000327367 WHAMMP3Q1A5X7 153 aa18.53■□□□□ 0.56
SMAD3-201ENST00000327367 TXNDC16Q9P2K2 825 aa18.53■□□□□ 0.56
SMAD3-201ENST00000327367 IGSF22Q8N9C0 903 aa18.52■□□□□ 0.56
SMAD3-201ENST00000327367 PDE1AP54750 535 aa18.52■□□□□ 0.56
SMAD3-201ENST00000327367 MUM1Q2TAK8 710 aa18.52■□□□□ 0.56
SMAD3-201ENST00000327367 CCDC110Q8TBZ0 833 aa18.52■□□□□ 0.56
SMAD3-201ENST00000327367 TSGA10Q9BZW7 698 aa18.52■□□□□ 0.56
SMAD3-201ENST00000327367 RTN1Q16799 776 aa18.52■□□□□ 0.56
SMAD3-201ENST00000327367 ANXA1P04083 346 aa18.52■□□□□ 0.55
SMAD3-201ENST00000327367 MEIS3Q99687 375 aa18.52■□□□□ 0.55
SMAD3-201ENST00000327367 TOP2AP11388 1531 aaKnown RBP18.52■□□□□ 0.55
SMAD3-201ENST00000327367 VPS52Q8N1B4 723 aa18.52■□□□□ 0.55
SMAD3-201ENST00000327367 SDCCAG8Q86SQ7 713 aaPredicted RBP18.51■□□□□ 0.55
SMAD3-201ENST00000327367 DCAF17Q5H9S7 520 aaPredicted RBP18.51■□□□□ 0.55
SMAD3-201ENST00000327367 SND1Q7KZF4 910 aaKnown RBP eCLIP18.51■□□□□ 0.55
SMAD3-201ENST00000327367 CBX8Q9HC52 389 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 MAPK8IP1Q9UQF2 711 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 ATP6V1AP38606 617 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 ZNF75DP51815 510 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 TUBB4BP68371 445 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 NMIQ13287 307 aaPredicted RBP18.51■□□□□ 0.55
SMAD3-201ENST00000327367 ZNF692Q9BU19 519 aaPredicted RBP18.51■□□□□ 0.55
SMAD3-201ENST00000327367 MBIPQ9NS73 344 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 ODF2LQ9ULJ1 636 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 EMILIN1Q9Y6C2 1016 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 AFAP1Q8N556 730 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 JAKMIP2Q96AA8 810 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 FAM212AQ96EL1 285 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 LRRC27Q9C0I9 530 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 RBM28Q9NW13 759 aaKnown RBP18.51■□□□□ 0.55
SMAD3-201ENST00000327367 FAM169AQ9Y6X4 670 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 TTC21AQ8NDW8 1320 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 CCDC26Q8TAB7 109 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 NUF2Q9BZD4 464 aa18.51■□□□□ 0.55
SMAD3-201ENST00000327367 GNGT1P63211 74 aa18.5■□□□□ 0.55
SMAD3-201ENST00000327367 SEL1L2Q5TEA6 688 aa18.5■□□□□ 0.55
SMAD3-201ENST00000327367 RHPN1Q8TCX5 695 aa18.5■□□□□ 0.55
SMAD3-201ENST00000327367 HINFPQ9BQA5 517 aa18.5■□□□□ 0.55
SMAD3-201ENST00000327367 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
SMAD3-201ENST00000327367 OPHN1O60890 802 aa18.5■□□□□ 0.55
SMAD3-201ENST00000327367 GADD45BO75293 160 aaPredicted RBP18.5■□□□□ 0.55
SMAD3-201ENST00000327367 IFIT1BQ5T764 474 aaKnown RBP18.5■□□□□ 0.55
SMAD3-201ENST00000327367 TRMT112Q9UI30 125 aaKnown RBP18.5■□□□□ 0.55
SMAD3-201ENST00000327367 ATP1A2P50993 1020 aa18.5■□□□□ 0.55
SMAD3-201ENST00000327367 COG7P83436 770 aa18.5■□□□□ 0.55
SMAD3-201ENST00000327367 GEN1Q17RS7 908 aa18.5■□□□□ 0.55
SMAD3-201ENST00000327367 UTP11Q9Y3A2 253 aaKnown RBP18.5■□□□□ 0.55
SMAD3-201ENST00000327367 CNGA4Q8IV77 575 aa18.49■□□□□ 0.55
SMAD3-201ENST00000327367 NUTM2BA6NNL0 878 aaPredicted RBP18.49■□□□□ 0.55
SMAD3-201ENST00000327367 NUTM2EB1AL46 878 aaPredicted RBP18.49■□□□□ 0.55
SMAD3-201ENST00000327367 NUTM2AQ8IVF1 878 aaPredicted RBP18.49■□□□□ 0.55
SMAD3-201ENST00000327367 LEO1Q8WVC0 666 aaPredicted RBP18.49■□□□□ 0.55
SMAD3-201ENST00000327367 TMOD2Q9NZR1 351 aa18.49■□□□□ 0.55
SMAD3-201ENST00000327367 PTPRCP08575 1304 aa18.49■□□□□ 0.55
SMAD3-201ENST00000327367 DHX29Q7Z478 1369 aaKnown RBP18.49■□□□□ 0.55
SMAD3-201ENST00000327367 ATP2A2P16615 1042 aaKnown RBP18.49■□□□□ 0.55
SMAD3-201ENST00000327367 HDAC1Q13547 482 aaPredicted RBP18.49■□□□□ 0.55
SMAD3-201ENST00000327367 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
SMAD3-201ENST00000327367 STX8Q9UNK0 236 aa18.49■□□□□ 0.55
SMAD3-201ENST00000327367 MYL5Q02045 173 aa18.49■□□□□ 0.55
SMAD3-201ENST00000327367 ANKRD42Q8N9B4 389 aa18.49■□□□□ 0.55
SMAD3-201ENST00000327367 EHMT1Q9H9B1 1298 aa18.49■□□□□ 0.55
SMAD3-201ENST00000327367 RASA3Q14644 834 aa18.48■□□□□ 0.55
SMAD3-201ENST00000327367 TSPYL2Q9H2G4 693 aaPredicted RBP18.48■□□□□ 0.55
SMAD3-201ENST00000327367 PFDN4Q9NQP4 134 aa18.48■□□□□ 0.55
SMAD3-201ENST00000327367 CETN3O15182 167 aa18.48■□□□□ 0.55
SMAD3-201ENST00000327367 CCDC62Q6P9F0 684 aa18.48■□□□□ 0.55
SMAD3-201ENST00000327367 TCHPQ9BT92 498 aa18.48■□□□□ 0.55
SMAD3-201ENST00000327367 PTPDC1A2A3K4 754 aa18.48■□□□□ 0.55
SMAD3-201ENST00000327367 GUCY2FP51841 1108 aa18.48■□□□□ 0.55
SMAD3-201ENST00000327367 ARHGAP5Q13017 1502 aa18.48■□□□□ 0.55
SMAD3-201ENST00000327367 FAM13AO94988 1023 aa18.48■□□□□ 0.55
SMAD3-201ENST00000327367 FAM173BQ6P4H8 233 aa18.48■□□□□ 0.55
SMAD3-201ENST00000327367 LRRC45Q96CN5 670 aa18.48■□□□□ 0.55
SMAD3-201ENST00000327367 SH3BP5O60239 455 aa18.48■□□□□ 0.55
SMAD3-201ENST00000327367 ZNF219Q9P2Y4 722 aaPredicted RBP18.48■□□□□ 0.55
SMAD3-201ENST00000327367 CALM1P0DP23 149 aa18.47■□□□□ 0.55
SMAD3-201ENST00000327367 CALM2P0DP24 149 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms