RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 CLIC4Q9Y696 253 aa16.95■□□□□ 0.3
SSBP3-201ENST00000326956 YEATS4O95619 227 aa16.95■□□□□ 0.3
SSBP3-201ENST00000326956 TIMM10P62072 90 aa16.95■□□□□ 0.3
SSBP3-201ENST00000326956 ILDR1Q86SU0 546 aaPredicted RBP16.95■□□□□ 0.3
SSBP3-201ENST00000326956 ORC3Q9UBD5 711 aaPredicted RBP16.95■□□□□ 0.3
SSBP3-201ENST00000326956 SALL1Q9NSC2 1324 aa16.95■□□□□ 0.3
SSBP3-201ENST00000326956 LMOD1P29536 600 aaPredicted RBP16.94■□□□□ 0.3
SSBP3-201ENST00000326956 NLRP12P59046 1061 aa16.94■□□□□ 0.3
SSBP3-201ENST00000326956 LRRFIP1Q32MZ4 808 aaKnown RBP16.94■□□□□ 0.3
SSBP3-201ENST00000326956 BPIFA3Q9BQP9 254 aa16.94■□□□□ 0.3
SSBP3-201ENST00000326956 ARGLU1Q9NWB6 273 aaPredicted RBP16.94■□□□□ 0.3
SSBP3-201ENST00000326956 NLRP2Q9NX02 1062 aa16.94■□□□□ 0.3
SSBP3-201ENST00000326956 PALLDQ8WX93 1383 aa16.94■□□□□ 0.3
SSBP3-201ENST00000326956 RNF113AO15541 343 aaKnown RBP16.94■□□□□ 0.3
SSBP3-201ENST00000326956 ZNF202O95125 648 aa16.94■□□□□ 0.3
SSBP3-201ENST00000326956 ARMCX5Q6P1M9 558 aa16.94■□□□□ 0.3
SSBP3-201ENST00000326956 BRAPQ7Z569 592 aa16.94■□□□□ 0.3
SSBP3-201ENST00000326956 MNS1Q8NEH6 495 aa16.94■□□□□ 0.3
SSBP3-201ENST00000326956 TAOK2Q9UL54 1235 aa16.93■□□□□ 0.3
SSBP3-201ENST00000326956 IMMTQ16891 758 aaKnown RBP16.93■□□□□ 0.3
SSBP3-201ENST00000326956 WASHC4Q2M389 1173 aa16.93■□□□□ 0.3
SSBP3-201ENST00000326956 ISM2Q6H9L7 571 aa16.93■□□□□ 0.3
SSBP3-201ENST00000326956 UBXN4Q92575 508 aa16.93■□□□□ 0.3
SSBP3-201ENST00000326956 POLR3EQ9NVU0 708 aa16.93■□□□□ 0.3
SSBP3-201ENST00000326956 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.93■□□□□ 0.3
SSBP3-201ENST00000326956 A0A0G2JLW4 131 aa16.93■□□□□ 0.3
SSBP3-201ENST00000326956 GOLGA8BA8MQT2 603 aa16.93■□□□□ 0.3
SSBP3-201ENST00000326956 SERPINC1P01008 464 aa16.93■□□□□ 0.3
SSBP3-201ENST00000326956 FDPSP14324 419 aaKnown RBP16.93■□□□□ 0.3
SSBP3-201ENST00000326956 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
SSBP3-201ENST00000326956 GNL2Q13823 731 aaKnown RBP16.93■□□□□ 0.3
SSBP3-201ENST00000326956 MYSM1Q5VVJ2 828 aa16.93■□□□□ 0.3
SSBP3-201ENST00000326956 TTLL5Q6EMB2 1281 aa16.93■□□□□ 0.3
SSBP3-201ENST00000326956 RALYLQ86SE5 291 aaKnown RBP16.93■□□□□ 0.3
SSBP3-201ENST00000326956 L2HGDHQ9H9P8 463 aa16.93■□□□□ 0.3
SSBP3-201ENST00000326956 KLF18A0A0U1RQI7 1052 aa16.92■□□□□ 0.3
SSBP3-201ENST00000326956 HAND2P61296 217 aa16.92■□□□□ 0.3
SSBP3-201ENST00000326956 FANCCQ00597 558 aa16.92■□□□□ 0.3
SSBP3-201ENST00000326956 ARHGAP29Q52LW3 1261 aa16.92■□□□□ 0.3
SSBP3-201ENST00000326956 DNAI1Q9UI46 699 aa16.92■□□□□ 0.3
SSBP3-201ENST00000326956 MAST3O60307 1309 aa16.92■□□□□ 0.3
SSBP3-201ENST00000326956 CBFA2T2O43439 604 aa16.92■□□□□ 0.3
SSBP3-201ENST00000326956 IL15P40933 162 aaPredicted RBP16.92■□□□□ 0.3
SSBP3-201ENST00000326956 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSBP3-201ENST00000326956 FBXO18Q8NFZ0 1043 aa16.92■□□□□ 0.3
SSBP3-201ENST00000326956 ERICH4A6NGS2 130 aa16.91■□□□□ 0.3
SSBP3-201ENST00000326956 KCNJ6P48051 423 aa16.91■□□□□ 0.3
SSBP3-201ENST00000326956 NOL10Q9BSC4 688 aaKnown RBP16.91■□□□□ 0.3
SSBP3-201ENST00000326956 AXIN2Q9Y2T1 843 aa16.91■□□□□ 0.3
SSBP3-201ENST00000326956 A0A0U1RQG5 324 aaPredicted RBP16.91■□□□□ 0.3
SSBP3-201ENST00000326956 CFAP100Q494V2 611 aa16.91■□□□□ 0.3
SSBP3-201ENST00000326956 ANO1Q5XXA6 986 aa16.91■□□□□ 0.3
SSBP3-201ENST00000326956 PRC1O43663 620 aa16.9■□□□□ 0.3
SSBP3-201ENST00000326956 UBASH3AP57075 661 aa16.9■□□□□ 0.3
SSBP3-201ENST00000326956 ETF1P62495 437 aaKnown RBP16.9■□□□□ 0.3
SSBP3-201ENST00000326956 TICAM2Q86XR7 235 aa16.9■□□□□ 0.3
SSBP3-201ENST00000326956 RAB11FIP4Q86YS3 637 aa16.9■□□□□ 0.3
SSBP3-201ENST00000326956 GPHNQ9NQX3 736 aaPredicted RBP16.9■□□□□ 0.3
SSBP3-201ENST00000326956 PFKFB1P16118 471 aa16.9■□□□□ 0.3
SSBP3-201ENST00000326956 TMCO3Q6UWJ1 677 aa16.9■□□□□ 0.3
SSBP3-201ENST00000326956 URI1O94763 535 aaPredicted RBP16.9■□□□□ 0.3
SSBP3-201ENST00000326956 CMA1P23946 247 aa16.9■□□□□ 0.3
SSBP3-201ENST00000326956 SYKP43405 635 aa16.9■□□□□ 0.3
SSBP3-201ENST00000326956 ZC3H6P61129 1189 aaKnown RBP16.9■□□□□ 0.3
SSBP3-201ENST00000326956 JMYQ8N9B5 988 aa16.9■□□□□ 0.3
SSBP3-201ENST00000326956 PLBD2Q8NHP8 589 aa16.9■□□□□ 0.3
SSBP3-201ENST00000326956 GPR108Q9NPR9 543 aa16.9■□□□□ 0.3
SSBP3-201ENST00000326956 MYH15Q9Y2K3 1946 aa16.89■□□□□ 0.29
SSBP3-201ENST00000326956 MARCKSP29966 332 aaPredicted RBP16.89■□□□□ 0.29
SSBP3-201ENST00000326956 OLFM4Q6UX06 510 aa16.89■□□□□ 0.29
SSBP3-201ENST00000326956 IKBKBO14920 756 aa16.89■□□□□ 0.29
SSBP3-201ENST00000326956 IFNL2Q8IZJ0 200 aa16.89■□□□□ 0.29
SSBP3-201ENST00000326956 A0A1B0GUL7 405 aa16.88■□□□□ 0.29
SSBP3-201ENST00000326956 M0R2C6 588 aa16.88■□□□□ 0.29
SSBP3-201ENST00000326956 CSB-PGBD3P0DP91 1061 aa16.88■□□□□ 0.29
SSBP3-201ENST00000326956 PHKG2P15735 406 aa16.88■□□□□ 0.29
SSBP3-201ENST00000326956 H2AFXP16104 143 aaPredicted RBP16.88■□□□□ 0.29
SSBP3-201ENST00000326956 CLCN6P51797 869 aa16.88■□□□□ 0.29
SSBP3-201ENST00000326956 FAM193AP78312 1265 aa16.88■□□□□ 0.29
SSBP3-201ENST00000326956 CCDC158Q5M9N0 1113 aa16.88■□□□□ 0.29
SSBP3-201ENST00000326956 CREBRFQ8IUR6 639 aa16.88■□□□□ 0.29
SSBP3-201ENST00000326956 SRRTQ9BXP5 876 aaKnown RBP16.88■□□□□ 0.29
SSBP3-201ENST00000326956 TOP1P11387 765 aaKnown RBP16.88■□□□□ 0.29
SSBP3-201ENST00000326956 ATG9AQ7Z3C6 839 aa16.88■□□□□ 0.29
SSBP3-201ENST00000326956 NCOA7Q8NI08 942 aa16.88■□□□□ 0.29
SSBP3-201ENST00000326956 ORAI2Q96SN7 254 aa16.88■□□□□ 0.29
SSBP3-201ENST00000326956 ZNF446Q9NWS9 450 aa16.88■□□□□ 0.29
SSBP3-201ENST00000326956 CEP126Q9P2H0 1117 aa16.88■□□□□ 0.29
SSBP3-201ENST00000326956 ERBB3P21860 1342 aa16.87■□□□□ 0.29
SSBP3-201ENST00000326956 ATP1A3P13637 1013 aa16.87■□□□□ 0.29
SSBP3-201ENST00000326956 MYL5Q02045 173 aa16.87■□□□□ 0.29
SSBP3-201ENST00000326956 TTC39AQ5SRH9 613 aa16.87■□□□□ 0.29
SSBP3-201ENST00000326956 ST7Q9NRC1 585 aa16.87■□□□□ 0.29
SSBP3-201ENST00000326956 CWC25Q9NXE8 425 aaPredicted RBP16.87■□□□□ 0.29
SSBP3-201ENST00000326956 PHLPP2Q6ZVD8 1323 aa16.87■□□□□ 0.29
SSBP3-201ENST00000326956 EYA2O00167 538 aa16.87■□□□□ 0.29
SSBP3-201ENST00000326956 ZSCAN12O43309 604 aa16.87■□□□□ 0.29
SSBP3-201ENST00000326956 TRDNQ13061 729 aa16.87■□□□□ 0.29
SSBP3-201ENST00000326956 CCDC93Q567U6 631 aa16.87■□□□□ 0.29
SSBP3-201ENST00000326956 TEX35Q5T0J7 233 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms