RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 GOLGA8BA8MQT2 603 aa23.16■■□□□ 1.3
CRLF3-201ENST00000324238 KIF28PB7ZC32 967 aa23.16■■□□□ 1.3
CRLF3-201ENST00000324238 CCZ1BP86790 482 aa23.16■■□□□ 1.3
CRLF3-201ENST00000324238 CCZ1P86791 482 aaPredicted RBP23.16■■□□□ 1.3
CRLF3-201ENST00000324238 DMTNQ08495 405 aa23.16■■□□□ 1.3
CRLF3-201ENST00000324238 MRPS27Q92552 414 aaKnown RBP23.16■■□□□ 1.3
CRLF3-201ENST00000324238 PUS7LQ9H0K6 701 aaKnown RBP23.16■■□□□ 1.3
CRLF3-201ENST00000324238 EYA2O00167 538 aa23.15■■□□□ 1.3
CRLF3-201ENST00000324238 FOXP2O15409 715 aa23.15■■□□□ 1.3
CRLF3-201ENST00000324238 HSP90AA4PQ58FG1 418 aa23.15■■□□□ 1.3
CRLF3-201ENST00000324238 TAF7LQ5H9L4 462 aa23.15■■□□□ 1.3
CRLF3-201ENST00000324238 CEP57L1Q8IYX8 460 aa23.15■■□□□ 1.3
CRLF3-201ENST00000324238 FMR1NBQ8N0W7 255 aaPredicted RBP23.15■■□□□ 1.3
CRLF3-201ENST00000324238 C8orf76Q96K31 380 aa23.15■■□□□ 1.3
CRLF3-201ENST00000324238 DSCC1Q9BVC3 393 aa23.15■■□□□ 1.3
CRLF3-201ENST00000324238 IFNKQ9P0W0 207 aa23.15■■□□□ 1.3
CRLF3-201ENST00000324238 ORC3Q9UBD5 711 aaPredicted RBP23.15■■□□□ 1.3
CRLF3-201ENST00000324238 FGAP02671 866 aa23.15■■□□□ 1.3
CRLF3-201ENST00000324238 UBE2Q2LH0YL09 131 aa23.14■■□□□ 1.3
CRLF3-201ENST00000324238 PRC1O43663 620 aa23.14■■□□□ 1.3
CRLF3-201ENST00000324238 GOLGA8FQ08AF8 430 aa23.14■■□□□ 1.3
CRLF3-201ENST00000324238 GOLGA8DPQ0D2H9 430 aa23.14■■□□□ 1.3
CRLF3-201ENST00000324238 NBPF11Q86T75 865 aa23.14■■□□□ 1.3
CRLF3-201ENST00000324238 INCENPQ9NQS7 918 aa23.14■■□□□ 1.3
CRLF3-201ENST00000324238 EVA1CP58658 441 aa23.14■■□□□ 1.29
CRLF3-201ENST00000324238 TMC6Q7Z403 805 aa23.14■■□□□ 1.29
CRLF3-201ENST00000324238 XPO4Q9C0E2 1151 aaKnown RBP23.14■■□□□ 1.29
CRLF3-201ENST00000324238 USP54Q70EL1 1684 aa23.14■■□□□ 1.29
CRLF3-201ENST00000324238 LMOD1P29536 600 aaPredicted RBP23.13■■□□□ 1.29
CRLF3-201ENST00000324238 ZRSR1Q15695 479 aaKnown RBP23.13■■□□□ 1.29
CRLF3-201ENST00000324238 MRFAP1L1Q96HT8 127 aa23.13■■□□□ 1.29
CRLF3-201ENST00000324238 SALL1Q9NSC2 1324 aa23.13■■□□□ 1.29
CRLF3-201ENST00000324238 ZAP70P43403 619 aa23.13■■□□□ 1.29
CRLF3-201ENST00000324238 IL15P40933 162 aaPredicted RBP23.13■■□□□ 1.29
CRLF3-201ENST00000324238 TTC39AQ5SRH9 613 aa23.13■■□□□ 1.29
CRLF3-201ENST00000324238 LRRN4CLQ8ND94 238 aa23.13■■□□□ 1.29
CRLF3-201ENST00000324238 CEP126Q9P2H0 1117 aa23.13■■□□□ 1.29
CRLF3-201ENST00000324238 CPLX1O14810 134 aa23.12■■□□□ 1.29
CRLF3-201ENST00000324238 CCDC57Q2TAC2 916 aa23.12■■□□□ 1.29
CRLF3-201ENST00000324238 LINC00301Q8NCQ3 95 aa23.12■■□□□ 1.29
CRLF3-201ENST00000324238 ASAP1Q9ULH1 1129 aa23.12■■□□□ 1.29
CRLF3-201ENST00000324238 CTAGE5O15320 804 aa23.12■■□□□ 1.29
CRLF3-201ENST00000324238 SARM1Q6SZW1 724 aa23.12■■□□□ 1.29
CRLF3-201ENST00000324238 SENP2Q9HC62 589 aa23.12■■□□□ 1.29
CRLF3-201ENST00000324238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.12■■□□□ 1.29
CRLF3-201ENST00000324238 OVOS2A0A0G2JMS6 1433 aa23.11■■□□□ 1.29
CRLF3-201ENST00000324238 MRC1P22897 1456 aa23.11■■□□□ 1.29
CRLF3-201ENST00000324238 ATP1A3P13637 1013 aa23.11■■□□□ 1.29
CRLF3-201ENST00000324238 XAGE2Q96GT9 111 aa23.11■■□□□ 1.29
CRLF3-201ENST00000324238 ELF2Q15723 593 aa23.11■■□□□ 1.29
CRLF3-201ENST00000324238 CTNNA3Q9UI47 895 aa23.11■■□□□ 1.29
CRLF3-201ENST00000324238 MYL10Q9BUA6 226 aa23.1■■□□□ 1.29
CRLF3-201ENST00000324238 AGXT2Q9BYV1 514 aa23.1■■□□□ 1.29
CRLF3-201ENST00000324238 HPS5Q9UPZ3 1129 aa23.1■■□□□ 1.29
CRLF3-201ENST00000324238 SPTLC2O15270 562 aa23.1■■□□□ 1.29
CRLF3-201ENST00000324238 ANTXR2P58335 489 aa23.1■■□□□ 1.29
CRLF3-201ENST00000324238 CCAR2Q8N163 923 aaKnown RBP23.1■■□□□ 1.29
CRLF3-201ENST00000324238 PHKBQ93100 1093 aa23.1■■□□□ 1.29
CRLF3-201ENST00000324238 ZNF274Q96GC6 653 aaPredicted RBP23.1■■□□□ 1.29
CRLF3-201ENST00000324238 KIAA1468Q9P260 1216 aa23.1■■□□□ 1.29
CRLF3-201ENST00000324238 PAXBP1Q9Y5B6 917 aa23.1■■□□□ 1.29
CRLF3-201ENST00000324238 CADPS2Q86UW7 1296 aa23.1■■□□□ 1.29
CRLF3-201ENST00000324238 DNAJC10Q8IXB1 793 aa23.1■■□□□ 1.29
CRLF3-201ENST00000324238 APPP05067 770 aa23.09■■□□□ 1.29
CRLF3-201ENST00000324238 CDC25BP30305 580 aa23.09■■□□□ 1.29
CRLF3-201ENST00000324238 ADALQ6DHV7 355 aa23.09■■□□□ 1.29
CRLF3-201ENST00000324238 WDHD1O75717 1129 aaPredicted RBP23.09■■□□□ 1.29
CRLF3-201ENST00000324238 ZNF202O95125 648 aa23.09■■□□□ 1.29
CRLF3-201ENST00000324238 SPATA31A3Q5VYP0 1347 aa23.09■■□□□ 1.29
CRLF3-201ENST00000324238 SNAP23O00161 211 aa23.08■■□□□ 1.29
CRLF3-201ENST00000324238 SPECC1Q5M775 1068 aa23.08■■□□□ 1.29
CRLF3-201ENST00000324238 ARMCX5Q6P1M9 558 aa23.08■■□□□ 1.29
CRLF3-201ENST00000324238 HELBQ8NG08 1087 aaPredicted RBP23.08■■□□□ 1.29
CRLF3-201ENST00000324238 RTEL1Q9NZ71 1219 aa23.08■■□□□ 1.29
CRLF3-201ENST00000324238 MST1RQ04912 1400 aa23.08■■□□□ 1.29
CRLF3-201ENST00000324238 SLC3A2P08195 630 aaKnown RBP23.08■■□□□ 1.29
CRLF3-201ENST00000324238 IMMTQ16891 758 aaKnown RBP23.08■■□□□ 1.29
CRLF3-201ENST00000324238 MYSM1Q5VVJ2 828 aa23.08■■□□□ 1.29
CRLF3-201ENST00000324238 SYNE3Q6ZMZ3 975 aa23.08■■□□□ 1.29
CRLF3-201ENST00000324238 KMT5BQ4FZB7 885 aa23.07■■□□□ 1.28
CRLF3-201ENST00000324238 NYAP1Q6ZVC0 841 aa23.07■■□□□ 1.28
CRLF3-201ENST00000324238 FBXO18Q8NFZ0 1043 aa23.07■■□□□ 1.28
CRLF3-201ENST00000324238 CLIC6Q96NY7 704 aa23.07■■□□□ 1.28
CRLF3-201ENST00000324238 SIPA1L3O60292 1781 aaPredicted RBP23.07■■□□□ 1.28
CRLF3-201ENST00000324238 RBM6P78332 1123 aaKnown RBP23.07■■□□□ 1.28
CRLF3-201ENST00000324238 SYT10Q6XYQ8 523 aa23.07■■□□□ 1.28
CRLF3-201ENST00000324238 KLHL34Q8N239 644 aa23.07■■□□□ 1.28
CRLF3-201ENST00000324238 AFDNP55196 1824 aaKnown RBP23.07■■□□□ 1.28
CRLF3-201ENST00000324238 LAMA4Q16363 1823 aa23.07■■□□□ 1.28
CRLF3-201ENST00000324238 CAVIN2O95810 425 aa23.07■■□□□ 1.28
CRLF3-201ENST00000324238 CCDC158Q5M9N0 1113 aa23.07■■□□□ 1.28
CRLF3-201ENST00000324238 BRINP3Q76B58 766 aa23.07■■□□□ 1.28
CRLF3-201ENST00000324238 RALYLQ86SE5 291 aaKnown RBP23.07■■□□□ 1.28
CRLF3-201ENST00000324238 TMX1Q9H3N1 280 aa23.07■■□□□ 1.28
CRLF3-201ENST00000324238 ST7Q9NRC1 585 aa23.07■■□□□ 1.28
CRLF3-201ENST00000324238 MROH7-TTC4A0A0A0MT08 1334 aa23.07■■□□□ 1.28
CRLF3-201ENST00000324238 PFKFB1P16118 471 aa23.06■■□□□ 1.28
CRLF3-201ENST00000324238 E4F1Q66K89 784 aaPredicted RBP23.06■■□□□ 1.28
CRLF3-201ENST00000324238 NAT10Q9H0A0 1025 aaKnown RBP23.06■■□□□ 1.28
CRLF3-201ENST00000324238 NEDD4P46934 1319 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms