RNA–Protein interactions for RNA: ENST00000321143.8

HCCS-201, Transcript of holocytochrome c synthase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HCCS, Length 2,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCS-201ENST00000321143 NAA16Q6N069 864 aaPredicted RBP22.32■■□□□ 1.16
HCCS-201ENST00000321143 SYNE4Q8N205 404 aa22.32■■□□□ 1.16
HCCS-201ENST00000321143 MPNDQ8N594 471 aa22.32■■□□□ 1.16
HCCS-201ENST00000321143 CCDC87Q9NVE4 849 aa22.32■■□□□ 1.16
HCCS-201ENST00000321143 KIF3AQ9Y496 699 aa22.32■■□□□ 1.16
HCCS-201ENST00000321143 MAP3K15Q6ZN16 1313 aa22.32■■□□□ 1.16
HCCS-201ENST00000321143 WASHC4Q2M389 1173 aa22.32■■□□□ 1.16
HCCS-201ENST00000321143 GIGYF2Q6Y7W6 1299 aaKnown RBP22.32■■□□□ 1.16
HCCS-201ENST00000321143 BICD2Q8TD16 824 aa22.32■■□□□ 1.16
HCCS-201ENST00000321143 NUP98P52948 1817 aa22.31■■□□□ 1.16
HCCS-201ENST00000321143 NHSQ6T4R5 1651 aa22.31■■□□□ 1.16
HCCS-201ENST00000321143 EIF5P55010 431 aaKnown RBP22.31■■□□□ 1.16
HCCS-201ENST00000321143 FAM200AQ8TCP9 573 aa22.31■■□□□ 1.16
HCCS-201ENST00000321143 ZNF274Q96GC6 653 aaPredicted RBP22.31■■□□□ 1.16
HCCS-201ENST00000321143 CLSTN2Q9H4D0 955 aa22.31■■□□□ 1.16
HCCS-201ENST00000321143 CTNNA3Q9UI47 895 aa22.31■■□□□ 1.16
HCCS-201ENST00000321143 MRVI1Q9Y6F6 885 aa22.31■■□□□ 1.16
HCCS-201ENST00000321143 AP5Z1O43299 807 aa22.31■■□□□ 1.16
HCCS-201ENST00000321143 SCARF1Q14162 830 aa22.31■■□□□ 1.16
HCCS-201ENST00000321143 CHST3Q7LGC8 479 aa22.31■■□□□ 1.16
HCCS-201ENST00000321143 CKAP2LQ8IYA6 745 aa22.31■■□□□ 1.16
HCCS-201ENST00000321143 SMARCC1Q92922 1105 aaPredicted RBP22.31■■□□□ 1.16
HCCS-201ENST00000321143 NAP1L2Q9ULW6 460 aaPredicted RBP22.31■■□□□ 1.16
HCCS-201ENST00000321143 PDIA3P30101 505 aaKnown RBP22.3■■□□□ 1.16
HCCS-201ENST00000321143 DZIP3Q86Y13 1208 aaKnown RBP22.3■■□□□ 1.16
HCCS-201ENST00000321143 ZNF830Q96NB3 372 aaPredicted RBP22.3■■□□□ 1.16
HCCS-201ENST00000321143 NR1I2O75469 434 aa22.29■■□□□ 1.16
HCCS-201ENST00000321143 ZAP70P43403 619 aa22.29■■□□□ 1.16
HCCS-201ENST00000321143 RBM43Q6ZSC3 357 aaKnown RBP22.29■■□□□ 1.16
HCCS-201ENST00000321143 AMIGO3Q86WK7 504 aa22.29■■□□□ 1.16
HCCS-201ENST00000321143 CDHR2Q9BYE9 1310 aa22.29■■□□□ 1.16
HCCS-201ENST00000321143 NCOA5Q9HCD5 579 aaKnown RBP22.29■■□□□ 1.16
HCCS-201ENST00000321143 COL5A3P25940 1745 aaPredicted RBP22.29■■□□□ 1.16
HCCS-201ENST00000321143 ABCC12Q96J65 1359 aa22.29■■□□□ 1.16
HCCS-201ENST00000321143 SALL1Q9NSC2 1324 aa22.29■■□□□ 1.16
HCCS-201ENST00000321143 IL6STP40189 918 aaPredicted RBP22.29■■□□□ 1.16
HCCS-201ENST00000321143 FOSBP53539 338 aa22.29■■□□□ 1.16
HCCS-201ENST00000321143 CHMP4CQ96CF2 233 aa22.29■■□□□ 1.16
HCCS-201ENST00000321143 RGS17Q9UGC6 210 aaPredicted RBP22.29■■□□□ 1.16
HCCS-201ENST00000321143 NLRP10Q86W26 655 aa22.28■■□□□ 1.16
HCCS-201ENST00000321143 FBXL16Q8N461 479 aa22.28■■□□□ 1.16
HCCS-201ENST00000321143 APPBP2Q92624 585 aa22.28■■□□□ 1.16
HCCS-201ENST00000321143 FOXP2O15409 715 aa22.28■■□□□ 1.16
HCCS-201ENST00000321143 ADD1P35611 737 aaKnown RBP22.28■■□□□ 1.16
HCCS-201ENST00000321143 ATP2B3Q16720 1220 aa22.28■■□□□ 1.16
HCCS-201ENST00000321143 IMMTQ16891 758 aaKnown RBP22.28■■□□□ 1.16
HCCS-201ENST00000321143 METTL24Q5JXM2 366 aa22.28■■□□□ 1.16
HCCS-201ENST00000321143 KRT27Q7Z3Y8 459 aa22.28■■□□□ 1.16
HCCS-201ENST00000321143 TTC12Q9H892 705 aaPredicted RBP22.28■■□□□ 1.16
HCCS-201ENST00000321143 RIPOR2Q9Y4F9 1068 aa22.28■■□□□ 1.16
HCCS-201ENST00000321143 RIC1Q4ADV7 1423 aa22.27■■□□□ 1.16
HCCS-201ENST00000321143 HSP90AB3PQ58FF7 597 aa22.27■■□□□ 1.16
HCCS-201ENST00000321143 TRIM37O94972 964 aa22.27■■□□□ 1.16
HCCS-201ENST00000321143 ITGA6P23229 1130 aa22.27■■□□□ 1.16
HCCS-201ENST00000321143 LDHAL6AQ6ZMR3 332 aa22.27■■□□□ 1.16
HCCS-201ENST00000321143 TTLL11Q8NHH1 800 aa22.27■■□□□ 1.16
HCCS-201ENST00000321143 FGAP02671 866 aa22.26■■□□□ 1.15
HCCS-201ENST00000321143 HAND2P61296 217 aa22.26■■□□□ 1.15
HCCS-201ENST00000321143 CEBPZQ03701 1054 aaKnown RBP22.26■■□□□ 1.15
HCCS-201ENST00000321143 PUS7LQ9H0K6 701 aaKnown RBP22.26■■□□□ 1.15
HCCS-201ENST00000321143 GREM2Q9H772 168 aa22.26■■□□□ 1.15
HCCS-201ENST00000321143 EVCP57679 992 aa22.26■■□□□ 1.15
HCCS-201ENST00000321143 ANO6Q4KMQ2 910 aa22.26■■□□□ 1.15
HCCS-201ENST00000321143 PI16Q6UXB8 463 aa22.26■■□□□ 1.15
HCCS-201ENST00000321143 PIBF1Q8WXW3 757 aa22.26■■□□□ 1.15
HCCS-201ENST00000321143 RCOR1Q9UKL0 485 aa22.26■■□□□ 1.15
HCCS-201ENST00000321143 CTSWP56202 376 aa22.25■■□□□ 1.15
HCCS-201ENST00000321143 RBM6P78332 1123 aaKnown RBP22.25■■□□□ 1.15
HCCS-201ENST00000321143 ANKRD18BA2A2Z9 1011 aa22.24■■□□□ 1.15
HCCS-201ENST00000321143 ZNF772Q68DY9 489 aaPredicted RBP22.24■■□□□ 1.15
HCCS-201ENST00000321143 SASS6Q6UVJ0 657 aa22.24■■□□□ 1.15
HCCS-201ENST00000321143 LUZP1Q86V48 1076 aa22.24■■□□□ 1.15
HCCS-201ENST00000321143 LRRC4BQ9NT99 713 aa22.24■■□□□ 1.15
HCCS-201ENST00000321143 CCNL1Q9UK58 526 aaPredicted RBP22.24■■□□□ 1.15
HCCS-201ENST00000321143 ATL3Q6DD88 541 aa22.24■■□□□ 1.15
HCCS-201ENST00000321143 ZNF396Q96N95 335 aaPredicted RBP22.24■■□□□ 1.15
HCCS-201ENST00000321143 CBX8Q9HC52 389 aa22.24■■□□□ 1.15
HCCS-201ENST00000321143 CNNM1Q9NRU3 951 aa22.24■■□□□ 1.15
HCCS-201ENST00000321143 UBN2Q6ZU65 1347 aa22.24■■□□□ 1.15
HCCS-201ENST00000321143 PPFIA3O75145 1194 aa22.23■■□□□ 1.15
HCCS-201ENST00000321143 MCAMP43121 646 aa22.23■■□□□ 1.15
HCCS-201ENST00000321143 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.23■■□□□ 1.15
HCCS-201ENST00000321143 GPHNQ9NQX3 736 aaPredicted RBP22.23■■□□□ 1.15
HCCS-201ENST00000321143 CARMIL3Q8ND23 1372 aa22.23■■□□□ 1.15
HCCS-201ENST00000321143 RREB1Q92766 1687 aa22.23■■□□□ 1.15
HCCS-201ENST00000321143 MYH15Q9Y2K3 1946 aa22.23■■□□□ 1.15
HCCS-201ENST00000321143 FAM177BA6PVY3 158 aa22.23■■□□□ 1.15
HCCS-201ENST00000321143 IRS4O14654 1257 aaPredicted RBP22.23■■□□□ 1.15
HCCS-201ENST00000321143 GPAA1O43292 621 aa22.23■■□□□ 1.15
HCCS-201ENST00000321143 FTOQ9C0B1 505 aaKnown RBP eCLIP22.23■■□□□ 1.15
HCCS-201ENST00000321143 PRC1O43663 620 aa22.22■■□□□ 1.15
HCCS-201ENST00000321143 GUCY1B3Q02153 619 aa22.22■■□□□ 1.15
HCCS-201ENST00000321143 POTEAQ6S8J7 498 aa22.22■■□□□ 1.15
HCCS-201ENST00000321143 MB21D2Q8IYB1 491 aaPredicted RBP22.22■■□□□ 1.15
HCCS-201ENST00000321143 USP28Q96RU2 1077 aa22.22■■□□□ 1.15
HCCS-201ENST00000321143 CAMTA2O94983 1202 aa22.22■■□□□ 1.15
HCCS-201ENST00000321143 TPM3P06753 285 aa22.22■■□□□ 1.15
HCCS-201ENST00000321143 FDPSP14324 419 aaKnown RBP22.22■■□□□ 1.15
HCCS-201ENST00000321143 NOLC1Q14978 699 aaKnown RBP eCLIP22.22■■□□□ 1.15
HCCS-201ENST00000321143 BCL11BQ9C0K0 894 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms