RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 USP21Q9UK80 565 aa12.76□□□□□ -0.37
TOP3A-201ENST00000321105 CTDP1Q9Y5B0 961 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-201ENST00000321105 RTN1Q16799 776 aa12.76□□□□□ -0.37
TOP3A-201ENST00000321105 CRACR2BQ8N4Y2 399 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-201ENST00000321105 ZBTB9Q96C00 473 aa12.76□□□□□ -0.37
TOP3A-201ENST00000321105 FTOQ9C0B1 505 aaKnown RBP eCLIP12.76□□□□□ -0.37
TOP3A-201ENST00000321105 RNF41Q9H4P4 317 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-201ENST00000321105 MROH1Q8NDA8 1641 aa12.76□□□□□ -0.37
TOP3A-201ENST00000321105 IFIT1BQ5T764 474 aaKnown RBP12.76□□□□□ -0.37
TOP3A-201ENST00000321105 GIGYF2Q6Y7W6 1299 aaKnown RBP12.76□□□□□ -0.37
TOP3A-201ENST00000321105 ANKRD20A12PQ8NF67 263 aa12.76□□□□□ -0.37
TOP3A-201ENST00000321105 EIF6P56537 245 aaKnown RBP12.75□□□□□ -0.37
TOP3A-201ENST00000321105 GJB4Q9NTQ9 266 aa12.75□□□□□ -0.37
TOP3A-201ENST00000321105 CCDC196A0A1B0GTZ2 297 aa12.75□□□□□ -0.37
TOP3A-201ENST00000321105 CDK5RAP3Q96JB5 506 aa12.75□□□□□ -0.37
TOP3A-201ENST00000321105 INCENPQ9NQS7 918 aa12.75□□□□□ -0.37
TOP3A-201ENST00000321105 CLIP2Q9UDT6 1046 aa12.75□□□□□ -0.37
TOP3A-201ENST00000321105 USPL1Q5W0Q7 1092 aa12.75□□□□□ -0.37
TOP3A-201ENST00000321105 CCDC96Q2M329 555 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 SPATA5Q8NB90 893 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 MAP4K1Q92918 833 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 OSBP2Q969R2 916 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 PLIN2Q99541 437 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 HAUS7Q99871 368 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 LMOD1P29536 600 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-201ENST00000321105 TXLNAP40222 546 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 ESR2Q92731 530 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 DDX19AQ9NUU7 478 aaKnown RBP12.74□□□□□ -0.37
TOP3A-201ENST00000321105 SRP68Q9UHB9 627 aaKnown RBP12.74□□□□□ -0.37
TOP3A-201ENST00000321105 NOL7Q9UMY1 257 aaKnown RBP12.74□□□□□ -0.37
TOP3A-201ENST00000321105 VWDEQ8N2E2 1590 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 HEG1Q9ULI3 1381 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 AOX1Q06278 1338 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 MAP3K15Q6ZN16 1313 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 UQCRHLA0A096LP55 91 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 UQCRHP07919 91 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 HELLSQ9NRZ9 838 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 ATG3Q9NT62 314 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 TCEAL9Q9UHQ7 104 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 CDC42BPGQ6DT37 1551 aa12.74□□□□□ -0.37
TOP3A-201ENST00000321105 TYRO3Q06418 890 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 NLRP10Q86W26 655 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 VSIG10Q8N0Z9 540 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 LPIN2Q92539 896 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 PUS7LQ9H0K6 701 aaKnown RBP12.73□□□□□ -0.37
TOP3A-201ENST00000321105 KCNJ14Q9UNX9 436 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 LIG1P18858 919 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 MSL1Q68DK7 614 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 CCDC186Q7Z3E2 898 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 CCDC47Q96A33 483 aaKnown RBP12.73□□□□□ -0.37
TOP3A-201ENST00000321105 TAF6LQ9Y6J9 622 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 ANKARQ7Z5J8 1434 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 LAMC1P11047 1609 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 NAP1L1P55209 391 aaKnown RBP12.73□□□□□ -0.37
TOP3A-201ENST00000321105 CRNKL1Q9BZJ0 848 aaKnown RBP12.73□□□□□ -0.37
TOP3A-201ENST00000321105 ZSWIM6Q9HCJ5 1215 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 ANO10Q9NW15 660 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 IQSEC2Q5JU85 1478 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 PRKAB2O43741 272 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 SYKP43405 635 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 SF3B2Q13435 895 aaKnown RBP12.73□□□□□ -0.37
TOP3A-201ENST00000321105 FAM47AQ5JRC9 791 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 CNBD1Q8NA66 436 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 WASF1Q92558 559 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 ZSCAN16Q9H4T2 348 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-201ENST00000321105 KAT14Q9H8E8 782 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 MTMR6Q9Y217 621 aa12.73□□□□□ -0.37
TOP3A-201ENST00000321105 SPTLC2O15270 562 aa12.72□□□□□ -0.37
TOP3A-201ENST00000321105 PCCAP05165 728 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-201ENST00000321105 KRT18P05783 430 aaKnown RBP12.72□□□□□ -0.37
TOP3A-201ENST00000321105 PDE6AP16499 860 aa12.72□□□□□ -0.37
TOP3A-201ENST00000321105 PDE8BO95263 885 aa12.72□□□□□ -0.37
TOP3A-201ENST00000321105 CCDC194A0A1B0GVG4 234 aa12.72□□□□□ -0.37
TOP3A-201ENST00000321105 IPO7O95373 1038 aaKnown RBP12.72□□□□□ -0.37
TOP3A-201ENST00000321105 TSPY3P0CV98 308 aa12.72□□□□□ -0.37
TOP3A-201ENST00000321105 TSPY8P0CW00 308 aa12.72□□□□□ -0.37
TOP3A-201ENST00000321105 PDE4BQ07343 736 aa12.72□□□□□ -0.37
TOP3A-201ENST00000321105 AOPEPQ8N6M6 819 aa12.72□□□□□ -0.37
TOP3A-201ENST00000321105 GPR101Q96P66 508 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-201ENST00000321105 DIP2BQ9P265 1576 aa12.72□□□□□ -0.37
TOP3A-201ENST00000321105 CEP170BQ9Y4F5 1589 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-201ENST00000321105 MED14O60244 1454 aa12.71□□□□□ -0.37
TOP3A-201ENST00000321105 TTC6Q86TZ1 520 aa12.71□□□□□ -0.37
TOP3A-201ENST00000321105 M0R2C6 588 aa12.71□□□□□ -0.37
TOP3A-201ENST00000321105 HIBADHP31937 336 aaKnown RBP12.71□□□□□ -0.37
TOP3A-201ENST00000321105 SCARF1Q14162 830 aa12.71□□□□□ -0.37
TOP3A-201ENST00000321105 SUSD4Q5VX71 490 aa12.71□□□□□ -0.37
TOP3A-201ENST00000321105 ANGEL1Q9UNK9 670 aaKnown RBP12.71□□□□□ -0.37
TOP3A-201ENST00000321105 PREX1Q8TCU6 1659 aa12.71□□□□□ -0.38
TOP3A-201ENST00000321105 UFL1O94874 794 aa12.71□□□□□ -0.38
TOP3A-201ENST00000321105 RPS8P62241 208 aaKnown RBP12.71□□□□□ -0.38
TOP3A-201ENST00000321105 HEATR3Q7Z4Q2 680 aa12.71□□□□□ -0.38
TOP3A-201ENST00000321105 LEO1Q8WVC0 666 aaPredicted RBP12.71□□□□□ -0.38
TOP3A-201ENST00000321105 MRPS27Q92552 414 aaKnown RBP12.71□□□□□ -0.38
TOP3A-201ENST00000321105 STAMQ92783 540 aa12.71□□□□□ -0.38
TOP3A-201ENST00000321105 CABP5Q9NP86 173 aa12.71□□□□□ -0.38
TOP3A-201ENST00000321105 V9GY48 417 aaPredicted RBP12.71□□□□□ -0.38
TOP3A-201ENST00000321105 C1orf167Q5SNV9 1468 aa12.71□□□□□ -0.38
TOP3A-201ENST00000321105 MAST3O60307 1309 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms