RNA–Protein interactions for RNA: ENST00000315616.11

RPUSD2-201, Transcript of RNA pseudouridylate synthase domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPUSD2, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD2-201ENST00000315616 LPIN2Q92539 896 aa17.44■□□□□ 0.38
RPUSD2-201ENST00000315616 CTDNEP1O95476 244 aa17.44■□□□□ 0.38
RPUSD2-201ENST00000315616 KCNQ4P56696 695 aa17.44■□□□□ 0.38
RPUSD2-201ENST00000315616 PARP10Q53GL7 1025 aa17.44■□□□□ 0.38
RPUSD2-201ENST00000315616 HS1BP3Q53T59 392 aa17.44■□□□□ 0.38
RPUSD2-201ENST00000315616 SLC9C2Q5TAH2 1124 aa17.44■□□□□ 0.38
RPUSD2-201ENST00000315616 DDX11Q96FC9 970 aa17.44■□□□□ 0.38
RPUSD2-201ENST00000315616 CTNNA3Q9UI47 895 aa17.44■□□□□ 0.38
RPUSD2-201ENST00000315616 SMARCC2Q8TAQ2 1214 aa17.43■□□□□ 0.38
RPUSD2-201ENST00000315616 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.43■□□□□ 0.38
RPUSD2-201ENST00000315616 BCL9LQ86UU0 1499 aa17.43■□□□□ 0.38
RPUSD2-201ENST00000315616 PTF1AQ7RTS3 328 aa17.43■□□□□ 0.38
RPUSD2-201ENST00000315616 MTERF4Q7Z6M4 381 aaKnown RBP17.43■□□□□ 0.38
RPUSD2-201ENST00000315616 SMARCC1Q92922 1105 aaPredicted RBP17.43■□□□□ 0.38
RPUSD2-201ENST00000315616 GPHNQ9NQX3 736 aaPredicted RBP17.43■□□□□ 0.38
RPUSD2-201ENST00000315616 TTF1Q15361 905 aaPredicted RBP17.42■□□□□ 0.38
RPUSD2-201ENST00000315616 TTC6Q86TZ1 520 aa17.42■□□□□ 0.38
RPUSD2-201ENST00000315616 COL5A3P25940 1745 aaPredicted RBP17.42■□□□□ 0.38
RPUSD2-201ENST00000315616 IDH1O75874 414 aaKnown RBP17.42■□□□□ 0.38
RPUSD2-201ENST00000315616 PDIA3P30101 505 aaKnown RBP17.42■□□□□ 0.38
RPUSD2-201ENST00000315616 CCT2P78371 535 aaKnown RBP17.42■□□□□ 0.38
RPUSD2-201ENST00000315616 IMMTQ16891 758 aaKnown RBP17.42■□□□□ 0.38
RPUSD2-201ENST00000315616 LINC00116Q8NCU8 138 aa17.42■□□□□ 0.38
RPUSD2-201ENST00000315616 NSUN7Q8NE18 718 aaKnown RBP17.42■□□□□ 0.38
RPUSD2-201ENST00000315616 NGLY1Q96IV0 654 aa17.42■□□□□ 0.38
RPUSD2-201ENST00000315616 C8orf37Q96NL8 207 aa17.42■□□□□ 0.38
RPUSD2-201ENST00000315616 MPHOSPH8Q99549 860 aa17.42■□□□□ 0.38
RPUSD2-201ENST00000315616 LLPHQ9BRT6 129 aaKnown RBP17.41■□□□□ 0.38
RPUSD2-201ENST00000315616 NCOA5Q9HCD5 579 aaKnown RBP17.41■□□□□ 0.38
RPUSD2-201ENST00000315616 ARAP2Q8WZ64 1704 aa17.41■□□□□ 0.38
RPUSD2-201ENST00000315616 UQCRFS1P1P0C7P4 283 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 CSPP1Q1MSJ5 1256 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 CCDC183Q5T5S1 534 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 ZSCAN25Q6NSZ9 544 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 FBXL16Q8N461 479 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 RNF214Q8ND24 703 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 TSPY26PQ9H489 355 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 TFIP11Q9UBB9 837 aaKnown RBP17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 WWC3Q9ULE0 1092 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 ZNF532Q9HCE3 1301 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 COL4A1P02462 1669 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 TCRBV5S4A2TA0A5A2 114 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 KRT85P78386 507 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 UBE3CQ15386 1083 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 CCDC152Q4G0S7 254 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 MEX3CQ5U5Q3 659 aaKnown RBP17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 SMIM5Q71RC9 77 aa17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 ZNF274Q96GC6 653 aaPredicted RBP17.4■□□□□ 0.38
RPUSD2-201ENST00000315616 PDE6AP16499 860 aa17.39■□□□□ 0.38
RPUSD2-201ENST00000315616 RASGRF1Q13972 1273 aa17.39■□□□□ 0.38
RPUSD2-201ENST00000315616 SPATA5Q8NB90 893 aa17.39■□□□□ 0.38
RPUSD2-201ENST00000315616 NBPF3Q9H094 633 aa17.39■□□□□ 0.38
RPUSD2-201ENST00000315616 PHF14O94880 888 aa17.39■□□□□ 0.37
RPUSD2-201ENST00000315616 SLC5A1P13866 664 aa17.39■□□□□ 0.37
RPUSD2-201ENST00000315616 EVCP57679 992 aa17.39■□□□□ 0.37
RPUSD2-201ENST00000315616 VPS72Q15906 364 aa17.39■□□□□ 0.37
RPUSD2-201ENST00000315616 MB21D2Q8IYB1 491 aaPredicted RBP17.39■□□□□ 0.37
RPUSD2-201ENST00000315616 ATRNO75882 1429 aa17.39■□□□□ 0.37
RPUSD2-201ENST00000315616 ZNF213O14771 459 aa17.38■□□□□ 0.37
RPUSD2-201ENST00000315616 PPFIA3O75145 1194 aa17.38■□□□□ 0.37
RPUSD2-201ENST00000315616 RESTQ13127 1097 aa17.38■□□□□ 0.37
RPUSD2-201ENST00000315616 NKX2-3Q8TAU0 364 aa17.38■□□□□ 0.37
RPUSD2-201ENST00000315616 RTL9Q8NET4 1388 aa17.38■□□□□ 0.37
RPUSD2-201ENST00000315616 PTPDC1A2A3K4 754 aa17.38■□□□□ 0.37
RPUSD2-201ENST00000315616 ANTXR2P58335 489 aa17.38■□□□□ 0.37
RPUSD2-201ENST00000315616 FAM184AQ8NB25 1140 aa17.38■□□□□ 0.37
RPUSD2-201ENST00000315616 DENND2AQ9ULE3 1009 aa17.38■□□□□ 0.37
RPUSD2-201ENST00000315616 NAP1L2Q9ULW6 460 aaPredicted RBP17.38■□□□□ 0.37
RPUSD2-201ENST00000315616 ELP1O95163 1332 aa17.37■□□□□ 0.37
RPUSD2-201ENST00000315616 SALL1Q9NSC2 1324 aa17.37■□□□□ 0.37
RPUSD2-201ENST00000315616 BCAMP50895 628 aa17.37■□□□□ 0.37
RPUSD2-201ENST00000315616 CLEC4GQ6UXB4 293 aa17.37■□□□□ 0.37
RPUSD2-201ENST00000315616 C3orf67Q6ZVT6 689 aa17.37■□□□□ 0.37
RPUSD2-201ENST00000315616 PDLIM2Q96JY6 352 aa17.37■□□□□ 0.37
RPUSD2-201ENST00000315616 LAMB2P55268 1798 aa17.37■□□□□ 0.37
RPUSD2-201ENST00000315616 BCORQ6W2J9 1755 aa17.37■□□□□ 0.37
RPUSD2-201ENST00000315616 PRC1O43663 620 aa17.37■□□□□ 0.37
RPUSD2-201ENST00000315616 IGHMBP2P38935 993 aaKnown RBP17.37■□□□□ 0.37
RPUSD2-201ENST00000315616 ERFEQ4G0M1 354 aa17.37■□□□□ 0.37
RPUSD2-201ENST00000315616 PRDM4Q9UKN5 801 aa17.37■□□□□ 0.37
RPUSD2-201ENST00000315616 ZNF652Q9Y2D9 606 aa17.37■□□□□ 0.37
RPUSD2-201ENST00000315616 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
RPUSD2-201ENST00000315616 TAF1P21675 1872 aa17.36■□□□□ 0.37
RPUSD2-201ENST00000315616 H3BQV1 296 aa17.36■□□□□ 0.37
RPUSD2-201ENST00000315616 ZNF500O60304 480 aaPredicted RBP17.36■□□□□ 0.37
RPUSD2-201ENST00000315616 MCM5P33992 734 aa17.36■□□□□ 0.37
RPUSD2-201ENST00000315616 CHRNDQ07001 517 aa17.36■□□□□ 0.37
RPUSD2-201ENST00000315616 IFFO2Q5TF58 517 aa17.36■□□□□ 0.37
RPUSD2-201ENST00000315616 NCOA7Q8NI08 942 aa17.36■□□□□ 0.37
RPUSD2-201ENST00000315616 STRBPQ96SI9 672 aaKnown RBP17.36■□□□□ 0.37
RPUSD2-201ENST00000315616 PODXL2Q9NZ53 605 aa17.36■□□□□ 0.37
RPUSD2-201ENST00000315616 LEO1Q8WVC0 666 aaPredicted RBP17.36■□□□□ 0.37
RPUSD2-201ENST00000315616 SCAND2PQ9GZW5 306 aaPredicted RBP17.36■□□□□ 0.37
RPUSD2-201ENST00000315616 USP21Q9UK80 565 aa17.36■□□□□ 0.37
RPUSD2-201ENST00000315616 AFF2P51816 1311 aa17.35■□□□□ 0.37
RPUSD2-201ENST00000315616 WTIPA6NIX2 430 aaPredicted RBP17.35■□□□□ 0.37
RPUSD2-201ENST00000315616 LETM1O95202 739 aaPredicted RBP17.35■□□□□ 0.37
RPUSD2-201ENST00000315616 FDPSP14324 419 aaKnown RBP17.35■□□□□ 0.37
RPUSD2-201ENST00000315616 FOSBP53539 338 aa17.35■□□□□ 0.37
RPUSD2-201ENST00000315616 HMGN5P82970 282 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms