RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 CCDC85AQ96PX6 553 aaPredicted RBP17.54■□□□□ 0.4
CHFR-202ENST00000315585 TNMDQ9H2S6 317 aa17.54■□□□□ 0.4
CHFR-202ENST00000315585 USP25Q9UHP3 1055 aa17.54■□□□□ 0.4
CHFR-202ENST00000315585 TAF6LQ9Y6J9 622 aa17.54■□□□□ 0.4
CHFR-202ENST00000315585 MYH14Q7Z406 1995 aaKnown RBP17.54■□□□□ 0.4
CHFR-202ENST00000315585 SYNE4Q8N205 404 aa17.53■□□□□ 0.4
CHFR-202ENST00000315585 LEO1Q8WVC0 666 aaPredicted RBP17.53■□□□□ 0.4
CHFR-202ENST00000315585 RIPOR2Q9Y4F9 1068 aa17.53■□□□□ 0.4
CHFR-202ENST00000315585 FAM200AQ8TCP9 573 aa17.53■□□□□ 0.4
CHFR-202ENST00000315585 NDUFB9Q9Y6M9 179 aa17.53■□□□□ 0.4
CHFR-202ENST00000315585 BTAF1O14981 1849 aa17.52■□□□□ 0.4
CHFR-202ENST00000315585 DHX16O60231 1041 aaKnown RBP17.52■□□□□ 0.4
CHFR-202ENST00000315585 EXOSC10Q01780 885 aaKnown RBP17.52■□□□□ 0.4
CHFR-202ENST00000315585 CCDC152Q4G0S7 254 aa17.52■□□□□ 0.4
CHFR-202ENST00000315585 ZSCAN25Q6NSZ9 544 aa17.52■□□□□ 0.4
CHFR-202ENST00000315585 BCORQ6W2J9 1755 aa17.52■□□□□ 0.4
CHFR-202ENST00000315585 ZNF396Q96N95 335 aaPredicted RBP17.52■□□□□ 0.4
CHFR-202ENST00000315585 MROH5Q6ZUA9 1318 aa17.52■□□□□ 0.39
CHFR-202ENST00000315585 SCRN1Q12765 414 aa17.51■□□□□ 0.39
CHFR-202ENST00000315585 ATP2B3Q16720 1220 aa17.51■□□□□ 0.39
CHFR-202ENST00000315585 IMMTQ16891 758 aaKnown RBP17.51■□□□□ 0.39
CHFR-202ENST00000315585 TPRNQ4KMQ1 711 aa17.51■□□□□ 0.39
CHFR-202ENST00000315585 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.51■□□□□ 0.39
CHFR-202ENST00000315585 E7EWF7 191 aa17.51■□□□□ 0.39
CHFR-202ENST00000315585 CTAGE5O15320 804 aa17.51■□□□□ 0.39
CHFR-202ENST00000315585 RPS6KA4O75676 772 aa17.51■□□□□ 0.39
CHFR-202ENST00000315585 RESTQ13127 1097 aa17.51■□□□□ 0.39
CHFR-202ENST00000315585 BICD2Q8TD16 824 aa17.51■□□□□ 0.39
CHFR-202ENST00000315585 XAGE2Q96GT9 111 aa17.51■□□□□ 0.39
CHFR-202ENST00000315585 CCNL1Q9UK58 526 aaPredicted RBP17.51■□□□□ 0.39
CHFR-202ENST00000315585 RTL9Q8NET4 1388 aa17.51■□□□□ 0.39
CHFR-202ENST00000315585 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHFR-202ENST00000315585 MAST3O60307 1309 aa17.5■□□□□ 0.39
CHFR-202ENST00000315585 RRP9O43818 475 aaKnown RBP17.5■□□□□ 0.39
CHFR-202ENST00000315585 NTSR2O95665 410 aa17.5■□□□□ 0.39
CHFR-202ENST00000315585 SASS6Q6UVJ0 657 aa17.5■□□□□ 0.39
CHFR-202ENST00000315585 SEPT12Q8IYM1 358 aa17.5■□□□□ 0.39
CHFR-202ENST00000315585 RGS22Q8NE09 1264 aa17.5■□□□□ 0.39
CHFR-202ENST00000315585 CLSTN2Q9H4D0 955 aa17.5■□□□□ 0.39
CHFR-202ENST00000315585 DACT1Q9NYF0 836 aa17.5■□□□□ 0.39
CHFR-202ENST00000315585 JAK2O60674 1132 aa17.49■□□□□ 0.39
CHFR-202ENST00000315585 TTF1Q15361 905 aaPredicted RBP17.49■□□□□ 0.39
CHFR-202ENST00000315585 RBM43Q6ZSC3 357 aaKnown RBP17.49■□□□□ 0.39
CHFR-202ENST00000315585 NSUN7Q8NE18 718 aaKnown RBP17.49■□□□□ 0.39
CHFR-202ENST00000315585 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.49■□□□□ 0.39
CHFR-202ENST00000315585 RIC1Q4ADV7 1423 aa17.49■□□□□ 0.39
CHFR-202ENST00000315585 LAMB2P55268 1798 aa17.49■□□□□ 0.39
CHFR-202ENST00000315585 PDE8BO95263 885 aa17.49■□□□□ 0.39
CHFR-202ENST00000315585 HMGB2P26583 209 aaKnown RBP17.49■□□□□ 0.39
CHFR-202ENST00000315585 EVCP57679 992 aa17.49■□□□□ 0.39
CHFR-202ENST00000315585 STOX1Q6ZVD7 989 aa17.49■□□□□ 0.39
CHFR-202ENST00000315585 APPBP2Q92624 585 aa17.49■□□□□ 0.39
CHFR-202ENST00000315585 MPHOSPH8Q99549 860 aa17.49■□□□□ 0.39
CHFR-202ENST00000315585 TFIP11Q9UBB9 837 aaKnown RBP17.49■□□□□ 0.39
CHFR-202ENST00000315585 TYRO3Q06418 890 aa17.48■□□□□ 0.39
CHFR-202ENST00000315585 WASHC4Q2M389 1173 aa17.48■□□□□ 0.39
CHFR-202ENST00000315585 ZNF512BQ96KM6 892 aaPredicted RBP17.48■□□□□ 0.39
CHFR-202ENST00000315585 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
CHFR-202ENST00000315585 RTCBQ9Y3I0 505 aaKnown RBP17.48■□□□□ 0.39
CHFR-202ENST00000315585 WDR19Q8NEZ3 1342 aa17.48■□□□□ 0.39
CHFR-202ENST00000315585 PTPDC1A2A3K4 754 aa17.48■□□□□ 0.39
CHFR-202ENST00000315585 FAM177BA6PVY3 158 aa17.48■□□□□ 0.39
CHFR-202ENST00000315585 IGHMBP2P38935 993 aaKnown RBP17.48■□□□□ 0.39
CHFR-202ENST00000315585 PIBF1Q8WXW3 757 aa17.48■□□□□ 0.39
CHFR-202ENST00000315585 DDX11Q96FC9 970 aa17.48■□□□□ 0.39
CHFR-202ENST00000315585 NYXQ9GZU5 481 aa17.48■□□□□ 0.39
CHFR-202ENST00000315585 LRP5O75197 1615 aa17.47■□□□□ 0.39
CHFR-202ENST00000315585 ZPR1O75312 459 aa17.47■□□□□ 0.39
CHFR-202ENST00000315585 LIG1P18858 919 aa17.47■□□□□ 0.39
CHFR-202ENST00000315585 PLCB2Q00722 1185 aa17.47■□□□□ 0.39
CHFR-202ENST00000315585 COL9A3Q14050 684 aaPredicted RBP17.47■□□□□ 0.39
CHFR-202ENST00000315585 QTRT2Q9H974 415 aaKnown RBP17.47■□□□□ 0.39
CHFR-202ENST00000315585 PUM3Q15397 648 aaKnown RBP17.47■□□□□ 0.39
CHFR-202ENST00000315585 FAM173BQ6P4H8 233 aa17.47■□□□□ 0.39
CHFR-202ENST00000315585 BCL11BQ9C0K0 894 aaPredicted RBP17.47■□□□□ 0.39
CHFR-202ENST00000315585 RCOR1Q9UKL0 485 aa17.47■□□□□ 0.39
CHFR-202ENST00000315585 R3HCC1Q9Y3T6 440 aaKnown RBP17.47■□□□□ 0.39
CHFR-202ENST00000315585 SCN7AQ01118 1682 aa17.47■□□□□ 0.39
CHFR-202ENST00000315585 APOBRQ0VD83 1088 aa17.46■□□□□ 0.39
CHFR-202ENST00000315585 VGLL2Q8N8G2 317 aa17.46■□□□□ 0.39
CHFR-202ENST00000315585 LPIN2Q92539 896 aa17.46■□□□□ 0.39
CHFR-202ENST00000315585 CDC5LQ99459 802 aaKnown RBP17.46■□□□□ 0.39
CHFR-202ENST00000315585 LY75O60449 1722 aa17.46■□□□□ 0.39
CHFR-202ENST00000315585 GNPATO15228 680 aa17.46■□□□□ 0.38
CHFR-202ENST00000315585 UQCRFS1P1P0C7P4 283 aa17.46■□□□□ 0.38
CHFR-202ENST00000315585 PDIA3P30101 505 aaKnown RBP17.46■□□□□ 0.38
CHFR-202ENST00000315585 RALYLQ86SE5 291 aaKnown RBP17.46■□□□□ 0.38
CHFR-202ENST00000315585 NCOA7Q8NI08 942 aa17.46■□□□□ 0.38
CHFR-202ENST00000315585 DDX60Q8IY21 1712 aaKnown RBP17.45■□□□□ 0.38
CHFR-202ENST00000315585 GTF2E1P29083 439 aaPredicted RBP17.45■□□□□ 0.38
CHFR-202ENST00000315585 ADORA1P30542 326 aa17.45■□□□□ 0.38
CHFR-202ENST00000315585 OSBP2Q969R2 916 aa17.45■□□□□ 0.38
CHFR-202ENST00000315585 LRRC2Q9BYS8 371 aa17.45■□□□□ 0.38
CHFR-202ENST00000315585 SLC5A1P13866 664 aa17.45■□□□□ 0.38
CHFR-202ENST00000315585 TRDNQ13061 729 aa17.45■□□□□ 0.38
CHFR-202ENST00000315585 HSP90AA2PQ14568 343 aaPredicted RBP17.45■□□□□ 0.38
CHFR-202ENST00000315585 CAMK4Q16566 473 aa17.45■□□□□ 0.38
CHFR-202ENST00000315585 CCDC73Q6ZRK6 1079 aa17.45■□□□□ 0.38
CHFR-202ENST00000315585 PTF1AQ7RTS3 328 aa17.45■□□□□ 0.38
CHFR-202ENST00000315585 NAP1L2Q9ULW6 460 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms