RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 EXOC6Q8TAG9 804 aa9.77□□□□□ -0.85
CDC42-201ENST00000315554 ZC3H12CQ9C0D7 883 aaKnown RBP9.77□□□□□ -0.85
CDC42-201ENST00000315554 COPRSQ9NQ92 184 aa9.77□□□□□ -0.85
CDC42-201ENST00000315554 KCNQ5Q9NR82 932 aa9.77□□□□□ -0.85
CDC42-201ENST00000315554 MROH5Q6ZUA9 1318 aa9.77□□□□□ -0.85
CDC42-201ENST00000315554 YDJCA8MPS7 323 aa9.76□□□□□ -0.85
CDC42-201ENST00000315554 G3V3G9 751 aa9.76□□□□□ -0.85
CDC42-201ENST00000315554 ECE2O60344 883 aa9.76□□□□□ -0.85
CDC42-201ENST00000315554 RAD17O75943 681 aa9.76□□□□□ -0.85
CDC42-201ENST00000315554 DDNO94850 711 aaPredicted RBP9.76□□□□□ -0.85
CDC42-201ENST00000315554 OS9Q13438 667 aaPredicted RBP9.76□□□□□ -0.85
CDC42-201ENST00000315554 SIRT2Q8IXJ6 389 aa9.76□□□□□ -0.85
CDC42-201ENST00000315554 SSH3Q8TE77 659 aa9.76□□□□□ -0.85
CDC42-201ENST00000315554 BCL11AQ9H165 835 aa9.76□□□□□ -0.85
CDC42-201ENST00000315554 LEMD3Q9Y2U8 911 aa9.76□□□□□ -0.85
CDC42-201ENST00000315554 GJA3Q9Y6H8 435 aa9.76□□□□□ -0.85
CDC42-201ENST00000315554 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.76□□□□□ -0.85
CDC42-201ENST00000315554 A0A1B0GUL6 1792 aa9.75□□□□□ -0.85
CDC42-201ENST00000315554 APBB1O00213 710 aa9.75□□□□□ -0.85
CDC42-201ENST00000315554 SURF6O75683 361 aaKnown RBP9.75□□□□□ -0.85
CDC42-201ENST00000315554 GYG1P46976 350 aa9.75□□□□□ -0.85
CDC42-201ENST00000315554 TFCP2Q12800 502 aa9.75□□□□□ -0.85
CDC42-201ENST00000315554 G3BP1Q13283 466 aaKnown RBP eCLIP9.75□□□□□ -0.85
CDC42-201ENST00000315554 VGLL2Q8N8G2 317 aa9.75□□□□□ -0.85
CDC42-201ENST00000315554 FBXW7Q969H0 707 aa9.75□□□□□ -0.85
CDC42-201ENST00000315554 EXOC6BQ9Y2D4 811 aa9.75□□□□□ -0.85
CDC42-201ENST00000315554 MED23Q9ULK4 1368 aa9.75□□□□□ -0.85
CDC42-201ENST00000315554 FZD9O00144 591 aa9.74□□□□□ -0.85
CDC42-201ENST00000315554 CIAO1O76071 339 aa9.74□□□□□ -0.85
CDC42-201ENST00000315554 PDE8BO95263 885 aa9.74□□□□□ -0.85
CDC42-201ENST00000315554 IL15P40933 162 aaPredicted RBP9.74□□□□□ -0.85
CDC42-201ENST00000315554 EIF6P56537 245 aaKnown RBP9.74□□□□□ -0.85
CDC42-201ENST00000315554 CXCL9Q07325 125 aa9.74□□□□□ -0.85
CDC42-201ENST00000315554 ZNF784Q8NCA9 323 aaPredicted RBP9.74□□□□□ -0.85
CDC42-201ENST00000315554 CHMP4BQ9H444 224 aaKnown RBP9.74□□□□□ -0.85
CDC42-201ENST00000315554 NMRK2Q9NPI5 230 aa9.74□□□□□ -0.85
CDC42-201ENST00000315554 CEP126Q9P2H0 1117 aa9.74□□□□□ -0.85
CDC42-201ENST00000315554 ZNRF3Q9ULT6 936 aa9.74□□□□□ -0.85
CDC42-201ENST00000315554 JAG2Q9Y219 1238 aa9.74□□□□□ -0.85
CDC42-201ENST00000315554 PCDHB15Q9Y5E8 787 aa9.74□□□□□ -0.85
CDC42-201ENST00000315554 GLTPD2A6NH11 291 aa9.73□□□□□ -0.85
CDC42-201ENST00000315554 SASH1O94885 1247 aa9.73□□□□□ -0.85
CDC42-201ENST00000315554 UBE4AQ14139 1066 aa9.73□□□□□ -0.85
CDC42-201ENST00000315554 ATP2B3Q16720 1220 aa9.73□□□□□ -0.85
CDC42-201ENST00000315554 RPAP2Q8IXW5 612 aaPredicted RBP9.73□□□□□ -0.85
CDC42-201ENST00000315554 ZNF710Q8N1W2 664 aa9.73□□□□□ -0.85
CDC42-201ENST00000315554 MXD3Q9BW11 206 aa9.73□□□□□ -0.85
CDC42-201ENST00000315554 VPS33BQ9H267 617 aa9.73□□□□□ -0.85
CDC42-201ENST00000315554 IQSEC3Q9UPP2 1182 aaPredicted RBP9.73□□□□□ -0.85
CDC42-201ENST00000315554 DICER1Q9UPY3 1922 aaKnown RBP9.73□□□□□ -0.85
CDC42-201ENST00000315554 IRS2Q9Y4H2 1338 aa9.73□□□□□ -0.85
CDC42-201ENST00000315554 PSMD14O00487 310 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 FGFR2P21802 821 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 ADORA1P30542 326 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 BCAMP50895 628 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 TIMM10P62072 90 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 PUM3Q15397 648 aaKnown RBP9.72□□□□□ -0.85
CDC42-201ENST00000315554 CIAPIN1Q6FI81 312 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 DPY19L2Q6NUT2 758 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 RRAGCQ9HB90 399 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
CDC42-201ENST00000315554 HMMRO75330 724 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 SLC5A1P13866 664 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 ZNF804AQ7Z570 1209 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 LPIN2Q92539 896 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 FAM84BQ96KN1 310 aaPredicted RBP9.72□□□□□ -0.85
CDC42-201ENST00000315554 NEUROD6Q96NK8 337 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 COA1Q9GZY4 146 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 CD209Q9NNX6 404 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 NOP58Q9Y2X3 529 aaKnown RBP9.72□□□□□ -0.85
CDC42-201ENST00000315554 KDM2BQ8NHM5 1336 aa9.72□□□□□ -0.85
CDC42-201ENST00000315554 ZC3H4Q9UPT8 1303 aaKnown RBP9.72□□□□□ -0.85
CDC42-201ENST00000315554 A0A1B0GUL7 405 aa9.71□□□□□ -0.86
CDC42-201ENST00000315554 SHTN1A0MZ66 631 aa9.71□□□□□ -0.86
CDC42-201ENST00000315554 IFIT1P09914 478 aaKnown RBP9.71□□□□□ -0.86
CDC42-201ENST00000315554 HIBADHP31937 336 aaKnown RBP9.71□□□□□ -0.86
CDC42-201ENST00000315554 GMPSP49915 693 aaPredicted RBP9.71□□□□□ -0.86
CDC42-201ENST00000315554 GTF2IP78347 998 aa9.71□□□□□ -0.86
CDC42-201ENST00000315554 C15orf52Q6ZUT6 534 aaKnown RBP9.71□□□□□ -0.86
CDC42-201ENST00000315554 VPS37DQ86XT2 251 aa9.71□□□□□ -0.86
CDC42-201ENST00000315554 IL1RAPL2Q9NP60 686 aa9.71□□□□□ -0.86
CDC42-201ENST00000315554 POTECB2RU33 542 aa9.7□□□□□ -0.86
CDC42-201ENST00000315554 ZNF609O15014 1411 aa9.7□□□□□ -0.86
CDC42-201ENST00000315554 SMARCA5O60264 1052 aaPredicted RBP9.7□□□□□ -0.86
CDC42-201ENST00000315554 CENPBP07199 599 aaPredicted RBP9.7□□□□□ -0.86
CDC42-201ENST00000315554 PHKA1P46020 1223 aa9.7□□□□□ -0.86
CDC42-201ENST00000315554 CHAF1AQ13111 956 aaPredicted RBP9.7□□□□□ -0.86
CDC42-201ENST00000315554 TNIP1Q15025 636 aa9.7□□□□□ -0.86
CDC42-201ENST00000315554 SCN9AQ15858 1988 aa9.7□□□□□ -0.86
CDC42-201ENST00000315554 CAVIN4Q5BKX8 364 aa9.7□□□□□ -0.86
CDC42-201ENST00000315554 PODNQ7Z5L7 613 aa9.7□□□□□ -0.86
CDC42-201ENST00000315554 GPC2Q8N158 579 aa9.7□□□□□ -0.86
CDC42-201ENST00000315554 CCDC8Q9H0W5 538 aaPredicted RBP9.7□□□□□ -0.86
CDC42-201ENST00000315554 TLR7Q9NYK1 1049 aaKnown RBP9.7□□□□□ -0.86
CDC42-201ENST00000315554 USP17L3A6NCW0 530 aa9.69□□□□□ -0.86
CDC42-201ENST00000315554 USP17L4A6NCW7 530 aa9.69□□□□□ -0.86
CDC42-201ENST00000315554 FRAT2O75474 233 aaPredicted RBP9.69□□□□□ -0.86
CDC42-201ENST00000315554 EPS15P42566 896 aa9.69□□□□□ -0.86
CDC42-201ENST00000315554 SCNN1DP51172 638 aa9.69□□□□□ -0.86
CDC42-201ENST00000315554 TNNI3KQ59H18 835 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms