RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 MTA3Q9BTC8 594 aa7.02□□□□□ -1.29
SEC22A-201ENST00000309934 PA2G4Q9UQ80 394 aaKnown RBP7.02□□□□□ -1.29
SEC22A-201ENST00000309934 CASTP20810 708 aaKnown RBP7.01□□□□□ -1.29
SEC22A-201ENST00000309934 HSPA4P34932 840 aa7.01□□□□□ -1.29
SEC22A-201ENST00000309934 PRPF40BQ6NWY9 871 aaKnown RBP7.01□□□□□ -1.29
SEC22A-201ENST00000309934 IQCA1Q86XH1 822 aa7.01□□□□□ -1.29
SEC22A-201ENST00000309934 BSDC1Q9NW68 430 aaPredicted RBP7.01□□□□□ -1.29
SEC22A-201ENST00000309934 SCN11AQ9UI33 1791 aa7.01□□□□□ -1.29
SEC22A-201ENST00000309934 ESPNB1AK53 854 aa7.01□□□□□ -1.29
SEC22A-201ENST00000309934 NBPF26B4DH59 902 aa7.01□□□□□ -1.29
SEC22A-201ENST00000309934 SF3B3Q15393 1217 aaKnown RBP7.01□□□□□ -1.29
SEC22A-201ENST00000309934 NBPF10Q6P3W6 841 aaKnown RBP7.01□□□□□ -1.29
SEC22A-201ENST00000309934 NBPF15Q8N660 670 aa7.01□□□□□ -1.29
SEC22A-201ENST00000309934 HSPA1LP34931 641 aa7.01□□□□□ -1.29
SEC22A-201ENST00000309934 GNAQP50148 359 aa7.01□□□□□ -1.29
SEC22A-201ENST00000309934 CBX1P83916 185 aa7.01□□□□□ -1.29
SEC22A-201ENST00000309934 NMIQ13287 307 aaPredicted RBP7.01□□□□□ -1.29
SEC22A-201ENST00000309934 CCDC125Q86Z20 511 aa7.01□□□□□ -1.29
SEC22A-201ENST00000309934 CNKSR1Q969H4 720 aa7.01□□□□□ -1.29
SEC22A-201ENST00000309934 TMEM87BQ96K49 555 aa7.01□□□□□ -1.29
SEC22A-201ENST00000309934 TBC1D2Q9BYX2 928 aa7.01□□□□□ -1.29
SEC22A-201ENST00000309934 RBM8AQ9Y5S9 174 aaKnown RBP7.01□□□□□ -1.29
SEC22A-201ENST00000309934 HIBADHP31937 336 aaKnown RBP7□□□□□ -1.29
SEC22A-201ENST00000309934 SF3A1Q15459 793 aaKnown RBP7□□□□□ -1.29
SEC22A-201ENST00000309934 ZSCAN16Q9H4T2 348 aaPredicted RBP7□□□□□ -1.29
SEC22A-201ENST00000309934 GGA1Q9UJY5 639 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 XDHP47989 1333 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 WDR19Q8NEZ3 1342 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 SLC10A5Q5PT55 438 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 NAA16Q6N069 864 aaPredicted RBP7□□□□□ -1.29
SEC22A-201ENST00000309934 DEF6Q9H4E7 631 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 LAMB4A4D0S4 1761 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 PLCH1Q4KWH8 1693 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 APBA3O96018 575 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 KIF5BP33176 963 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 MMP14P50281 582 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 RGS22Q8NE09 1264 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 TTLL11Q8NHH1 800 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 ESR2Q92731 530 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 GTPBP4Q9BZE4 634 aaKnown RBP7□□□□□ -1.29
SEC22A-201ENST00000309934 HDAC9Q9UKV0 1011 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 CEP131Q9UPN4 1083 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 COL18A1P39060 1754 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 CLCN1P35523 988 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 KRT85P78386 507 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 C16orf71Q8IYS4 520 aaPredicted RBP7□□□□□ -1.29
SEC22A-201ENST00000309934 PIK3R5Q8WYR1 880 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 DBNDD2Q9BQY9 259 aa7□□□□□ -1.29
SEC22A-201ENST00000309934 PYM1Q9BRP8 204 aaKnown RBP7□□□□□ -1.29
SEC22A-201ENST00000309934 SCAND2PQ9GZW5 306 aaPredicted RBP7□□□□□ -1.29
SEC22A-201ENST00000309934 PDS5AQ29RF7 1337 aaKnown RBP6.99□□□□□ -1.29
SEC22A-201ENST00000309934 MAGEB6P1A0A0J9YX57 407 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 GSPT1P15170 499 aaKnown RBP6.99□□□□□ -1.29
SEC22A-201ENST00000309934 FOXO4P98177 505 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 CREB3L3Q68CJ9 461 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 MFSD6Q6ZSS7 791 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 RUFY3Q7L099 469 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 DHX32Q7L7V1 743 aaKnown RBP6.99□□□□□ -1.29
SEC22A-201ENST00000309934 SPATA5Q8NB90 893 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 EAF2Q96CJ1 260 aaPredicted RBP6.99□□□□□ -1.29
SEC22A-201ENST00000309934 TRERF1Q96PN7 1200 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 ALDH8A1Q9H2A2 487 aaPredicted RBP6.99□□□□□ -1.29
SEC22A-201ENST00000309934 NOL7Q9UMY1 257 aaKnown RBP6.99□□□□□ -1.29
SEC22A-201ENST00000309934 DDX49Q9Y6V7 483 aaKnown RBP6.99□□□□□ -1.29
SEC22A-201ENST00000309934 STRCP1A6NGW2 1772 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 H0YIN7 160 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 BMP15O95972 392 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 HLA-DOAP06340 250 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 SLC9C2Q5TAH2 1124 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 FAM43BQ6ZT52 329 aaPredicted RBP6.99□□□□□ -1.29
SEC22A-201ENST00000309934 CCDC12Q8WUD4 166 aaPredicted RBP6.99□□□□□ -1.29
SEC22A-201ENST00000309934 CCDC47Q96A33 483 aaKnown RBP6.99□□□□□ -1.29
SEC22A-201ENST00000309934 SUGT1Q9Y2Z0 365 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 COL16A1Q07092 1604 aaPredicted RBP6.99□□□□□ -1.29
SEC22A-201ENST00000309934 CAMTA2O94983 1202 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 USP5P45974 858 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 GRAPQ13588 217 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 GIMAP6Q6P9H5 292 aa6.99□□□□□ -1.29
SEC22A-201ENST00000309934 GRAPLQ8TC17 118 aaPredicted RBP6.99□□□□□ -1.29
SEC22A-201ENST00000309934 ZC3H12CQ9C0D7 883 aaKnown RBP6.99□□□□□ -1.29
SEC22A-201ENST00000309934 ADAMTS7Q9UKP4 1686 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 CCDC73Q6ZRK6 1079 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 HOOK2Q96ED9 719 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 TIGD1Q96MW7 591 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 RBM28Q9NW13 759 aaKnown RBP6.98□□□□□ -1.29
SEC22A-201ENST00000309934 ABCF2Q9UG63 623 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 PRAMEF22A3QJZ6 481 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 LDHBP07195 334 aaKnown RBP6.98□□□□□ -1.29
SEC22A-201ENST00000309934 NPR1P16066 1061 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 CYP7A1P22680 504 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 ZMYM1Q5SVZ6 1142 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 USPL1Q5W0Q7 1092 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 LARP1BQ659C4 914 aaKnown RBP6.98□□□□□ -1.29
SEC22A-201ENST00000309934 PI4K2BQ8TCG2 481 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 SLC16A10Q8TF71 515 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 C6orf229H3BNL8 230 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 PIP4K2AP48426 406 aaPredicted RBP6.98□□□□□ -1.29
SEC22A-201ENST00000309934 CATIPQ7Z7H3 387 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 CRAMP1Q96RY5 1269 aa6.98□□□□□ -1.29
SEC22A-201ENST00000309934 SPRYD3Q8NCJ5 442 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms