RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ST3GAL1Q11201 340 aa25.27■■□□□ 1.64
ATG4D-201ENST00000309469 MAP3K12Q12852 859 aa25.27■■□□□ 1.64
ATG4D-201ENST00000309469 NECAB1Q8N987 351 aa25.27■■□□□ 1.64
ATG4D-201ENST00000309469 FGAP02671 866 aa25.27■■□□□ 1.64
ATG4D-201ENST00000309469 SKOR2Q2VWA4 1001 aaPredicted RBP25.27■■□□□ 1.64
ATG4D-201ENST00000309469 FOXD4L5Q5VV16 416 aaPredicted RBP25.27■■□□□ 1.64
ATG4D-201ENST00000309469 DHX32Q7L7V1 743 aaKnown RBP25.27■■□□□ 1.64
ATG4D-201ENST00000309469 FOXD4L4Q8WXT5 416 aaPredicted RBP25.27■■□□□ 1.64
ATG4D-201ENST00000309469 ZNF804BA4D1E1 1349 aa25.26■■□□□ 1.63
ATG4D-201ENST00000309469 CASZ1Q86V15 1759 aa25.26■■□□□ 1.63
ATG4D-201ENST00000309469 MCTP1Q6DN14 999 aa25.26■■□□□ 1.63
ATG4D-201ENST00000309469 Q6ZUG5 572 aa25.26■■□□□ 1.63
ATG4D-201ENST00000309469 WDR33Q9C0J8 1336 aaKnown RBP25.26■■□□□ 1.63
ATG4D-201ENST00000309469 WTIPA6NIX2 430 aaPredicted RBP25.25■■□□□ 1.63
ATG4D-201ENST00000309469 IMMTQ16891 758 aaKnown RBP25.25■■□□□ 1.63
ATG4D-201ENST00000309469 GNL3LQ9NVN8 582 aaKnown RBP25.25■■□□□ 1.63
ATG4D-201ENST00000309469 MYH7P12883 1935 aa25.25■■□□□ 1.63
ATG4D-201ENST00000309469 GYS1P13807 737 aa25.25■■□□□ 1.63
ATG4D-201ENST00000309469 GYG1P46976 350 aa25.25■■□□□ 1.63
ATG4D-201ENST00000309469 CNBD1Q8NA66 436 aa25.25■■□□□ 1.63
ATG4D-201ENST00000309469 EXOSC10Q01780 885 aaKnown RBP25.24■■□□□ 1.63
ATG4D-201ENST00000309469 TXNRD1Q16881 649 aa25.24■■□□□ 1.63
ATG4D-201ENST00000309469 PROM2Q8N271 834 aa25.24■■□□□ 1.63
ATG4D-201ENST00000309469 ANKRD2Q9GZV1 360 aa25.24■■□□□ 1.63
ATG4D-201ENST00000309469 TAF1P21675 1872 aa25.24■■□□□ 1.63
ATG4D-201ENST00000309469 HMGB2P26583 209 aaKnown RBP25.24■■□□□ 1.63
ATG4D-201ENST00000309469 GJB2P29033 226 aa25.24■■□□□ 1.63
ATG4D-201ENST00000309469 CAVIN4Q5BKX8 364 aa25.24■■□□□ 1.63
ATG4D-201ENST00000309469 MAGEB6Q8N7X4 407 aa25.24■■□□□ 1.63
ATG4D-201ENST00000309469 UBR3Q6ZT12 1888 aa25.23■■□□□ 1.63
ATG4D-201ENST00000309469 SYT1P21579 422 aa25.22■■□□□ 1.63
ATG4D-201ENST00000309469 AIDAQ96BJ3 306 aa25.22■■□□□ 1.63
ATG4D-201ENST00000309469 FAM84BQ96KN1 310 aaPredicted RBP25.22■■□□□ 1.63
ATG4D-201ENST00000309469 STRBPQ96SI9 672 aaKnown RBP25.22■■□□□ 1.63
ATG4D-201ENST00000309469 A0A1B0GUL6 1792 aa25.21■■□□□ 1.63
ATG4D-201ENST00000309469 HAND2P61296 217 aa25.21■■□□□ 1.63
ATG4D-201ENST00000309469 FGD1P98174 961 aa25.21■■□□□ 1.63
ATG4D-201ENST00000309469 PRR5LQ6MZQ0 368 aa25.21■■□□□ 1.63
ATG4D-201ENST00000309469 LRRC2Q9BYS8 371 aa25.21■■□□□ 1.63
ATG4D-201ENST00000309469 IQSEC3Q9UPP2 1182 aaPredicted RBP25.21■■□□□ 1.63
ATG4D-201ENST00000309469 ZNF213O14771 459 aa25.2■■□□□ 1.62
ATG4D-201ENST00000309469 STX6O43752 255 aa25.2■■□□□ 1.62
ATG4D-201ENST00000309469 VPS37DQ86XT2 251 aa25.2■■□□□ 1.62
ATG4D-201ENST00000309469 BRF1Q92994 677 aa25.2■■□□□ 1.62
ATG4D-201ENST00000309469 LRP2BPQ9P2M1 347 aa25.2■■□□□ 1.62
ATG4D-201ENST00000309469 FBXO33Q7Z6M2 555 aa25.2■■□□□ 1.62
ATG4D-201ENST00000309469 AGXT2Q9BYV1 514 aa25.2■■□□□ 1.62
ATG4D-201ENST00000309469 GZF1Q9H116 711 aaPredicted RBP25.2■■□□□ 1.62
ATG4D-201ENST00000309469 LMBRD1Q9NUN5 540 aa25.2■■□□□ 1.62
ATG4D-201ENST00000309469 TNRC6CQ9HCJ0 1690 aaKnown RBP25.19■■□□□ 1.62
ATG4D-201ENST00000309469 ZSCAN22P10073 491 aaPredicted RBP25.19■■□□□ 1.62
ATG4D-201ENST00000309469 STK3Q13188 491 aa25.19■■□□□ 1.62
ATG4D-201ENST00000309469 DOCK2Q92608 1830 aa25.19■■□□□ 1.62
ATG4D-201ENST00000309469 MYO5AQ9Y4I1 1855 aaKnown RBP25.19■■□□□ 1.62
ATG4D-201ENST00000309469 APPP05067 770 aa25.18■■□□□ 1.62
ATG4D-201ENST00000309469 SERPINB2P05120 415 aa25.18■■□□□ 1.62
ATG4D-201ENST00000309469 CHAMP1Q96JM3 812 aa25.18■■□□□ 1.62
ATG4D-201ENST00000309469 DENND2AQ9ULE3 1009 aa25.18■■□□□ 1.62
ATG4D-201ENST00000309469 GRAPQ13588 217 aa25.18■■□□□ 1.62
ATG4D-201ENST00000309469 GRAPLQ8TC17 118 aaPredicted RBP25.18■■□□□ 1.62
ATG4D-201ENST00000309469 GTF3C6Q969F1 213 aa25.18■■□□□ 1.62
ATG4D-201ENST00000309469 PLSCR1O15162 318 aa25.17■■□□□ 1.62
ATG4D-201ENST00000309469 DTNBO60941 627 aa25.17■■□□□ 1.62
ATG4D-201ENST00000309469 MBD4O95243 580 aa25.17■■□□□ 1.62
ATG4D-201ENST00000309469 PATL2C9JE40 543 aaKnown RBP25.16■■□□□ 1.62
ATG4D-201ENST00000309469 SEMA3EO15041 775 aa25.16■■□□□ 1.62
ATG4D-201ENST00000309469 PRPF40AO75400 957 aaKnown RBP25.16■■□□□ 1.62
ATG4D-201ENST00000309469 KLRK1P26718 216 aa25.16■■□□□ 1.62
ATG4D-201ENST00000309469 ALX1Q15699 326 aa25.16■■□□□ 1.62
ATG4D-201ENST00000309469 ST5P78524 1137 aa25.16■■□□□ 1.62
ATG4D-201ENST00000309469 FBXL16Q8N461 479 aa25.16■■□□□ 1.62
ATG4D-201ENST00000309469 ARMT1Q9H993 441 aa25.16■■□□□ 1.62
ATG4D-201ENST00000309469 ABCF2Q9UG63 623 aa25.16■■□□□ 1.62
ATG4D-201ENST00000309469 LAMA4Q16363 1823 aa25.15■■□□□ 1.62
ATG4D-201ENST00000309469 NCOA7Q8NI08 942 aa25.15■■□□□ 1.62
ATG4D-201ENST00000309469 DDX49Q9Y6V7 483 aaKnown RBP25.15■■□□□ 1.62
ATG4D-201ENST00000309469 COL1A1P02452 1464 aaPredicted RBP25.15■■□□□ 1.62
ATG4D-201ENST00000309469 PDIA4P13667 645 aaKnown RBP25.14■■□□□ 1.62
ATG4D-201ENST00000309469 HIBADHP31937 336 aaKnown RBP25.14■■□□□ 1.62
ATG4D-201ENST00000309469 KLHL40Q2TBA0 621 aa25.14■■□□□ 1.62
ATG4D-201ENST00000309469 CHST3Q7LGC8 479 aa25.14■■□□□ 1.62
ATG4D-201ENST00000309469 ZMYM6O95789 1325 aa25.14■■□□□ 1.61
ATG4D-201ENST00000309469 PNPLA7Q6ZV29 1317 aa25.14■■□□□ 1.61
ATG4D-201ENST00000309469 PFKFB2O60825 505 aa25.14■■□□□ 1.61
ATG4D-201ENST00000309469 APBA3O96018 575 aa25.14■■□□□ 1.61
ATG4D-201ENST00000309469 RXRBP28702 533 aa25.14■■□□□ 1.61
ATG4D-201ENST00000309469 APOBRQ0VD83 1088 aa25.14■■□□□ 1.61
ATG4D-201ENST00000309469 MB21D2Q8IYB1 491 aaPredicted RBP25.14■■□□□ 1.61
ATG4D-201ENST00000309469 NBPF3Q9H094 633 aa25.14■■□□□ 1.61
ATG4D-201ENST00000309469 TFCP2L1Q9NZI6 479 aa25.14■■□□□ 1.61
ATG4D-201ENST00000309469 RAI14Q9P0K7 980 aa25.14■■□□□ 1.61
ATG4D-201ENST00000309469 MTMR6Q9Y217 621 aa25.14■■□□□ 1.61
ATG4D-201ENST00000309469 GNAT2P19087 354 aa25.13■■□□□ 1.61
ATG4D-201ENST00000309469 MCM5P33992 734 aa25.13■■□□□ 1.61
ATG4D-201ENST00000309469 CRY2Q49AN0 593 aa25.13■■□□□ 1.61
ATG4D-201ENST00000309469 LARP1BQ659C4 914 aaKnown RBP25.13■■□□□ 1.61
ATG4D-201ENST00000309469 IFNL3Q8IZI9 196 aa25.13■■□□□ 1.61
ATG4D-201ENST00000309469 RPGRQ92834 1020 aaKnown RBP25.13■■□□□ 1.61
ATG4D-201ENST00000309469 EP400Q96L91 3159 aa25.13■■□□□ 1.61
ATG4D-201ENST00000309469 F13A1P00488 732 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms