RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 UBR1Q8IWV7 1749 aa12.06□□□□□ -0.48
MSRB3-201ENST00000308259 SASH1O94885 1247 aa12.06□□□□□ -0.48
MSRB3-201ENST00000308259 ZSCAN25Q6NSZ9 544 aa12.06□□□□□ -0.48
MSRB3-201ENST00000308259 NOC3LQ8WTT2 800 aaKnown RBP12.06□□□□□ -0.48
MSRB3-201ENST00000308259 IP6K1Q92551 441 aa12.06□□□□□ -0.48
MSRB3-201ENST00000308259 SUDS3Q9H7L9 328 aaPredicted RBP12.06□□□□□ -0.48
MSRB3-201ENST00000308259 XRN1Q8IZH2 1706 aaKnown RBP12.06□□□□□ -0.48
MSRB3-201ENST00000308259 ZNF165P49910 485 aa12.06□□□□□ -0.48
MSRB3-201ENST00000308259 SLFNL1Q499Z3 407 aa12.06□□□□□ -0.48
MSRB3-201ENST00000308259 PIK3C2AO00443 1686 aa12.06□□□□□ -0.48
MSRB3-201ENST00000308259 ANKARQ7Z5J8 1434 aa12.06□□□□□ -0.48
MSRB3-201ENST00000308259 DIP2AQ14689 1571 aa12.06□□□□□ -0.48
MSRB3-201ENST00000308259 G3BP1Q13283 466 aaKnown RBP eCLIP12.06□□□□□ -0.48
MSRB3-201ENST00000308259 ANO6Q4KMQ2 910 aa12.06□□□□□ -0.48
MSRB3-201ENST00000308259 ZNF589Q86UQ0 364 aaPredicted RBP12.06□□□□□ -0.48
MSRB3-201ENST00000308259 DBF4Q9UBU7 674 aaPredicted RBP12.06□□□□□ -0.48
MSRB3-201ENST00000308259 ZKSCAN1P17029 563 aaPredicted RBP12.06□□□□□ -0.48
MSRB3-201ENST00000308259 CCDC129Q6ZRS4 1044 aa12.06□□□□□ -0.48
MSRB3-201ENST00000308259 PACS2Q86VP3 889 aa12.06□□□□□ -0.48
MSRB3-201ENST00000308259 RUFY2Q8WXA3 655 aa12.05□□□□□ -0.48
MSRB3-201ENST00000308259 KAZALD1Q96I82 304 aa12.05□□□□□ -0.48
MSRB3-201ENST00000308259 STK11IPQ8N1F8 1099 aa12.05□□□□□ -0.48
MSRB3-201ENST00000308259 CCDC196A0A1B0GTZ2 297 aa12.05□□□□□ -0.48
MSRB3-201ENST00000308259 RNMTO43148 476 aaKnown RBP12.05□□□□□ -0.48
MSRB3-201ENST00000308259 RIC3Q7Z5B4 369 aa12.05□□□□□ -0.48
MSRB3-201ENST00000308259 TTC6Q86TZ1 520 aa12.05□□□□□ -0.48
MSRB3-201ENST00000308259 CEP120Q8N960 986 aa12.05□□□□□ -0.48
MSRB3-201ENST00000308259 NALCNQ8IZF0 1738 aa12.05□□□□□ -0.48
MSRB3-201ENST00000308259 NWD1Q149M9 1564 aa12.05□□□□□ -0.48
MSRB3-201ENST00000308259 CCDC69A6NI79 296 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 GIGYF1O75420 1035 aaPredicted RBP12.04□□□□□ -0.48
MSRB3-201ENST00000308259 NEFHP12036 1026 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 GCKP35557 465 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 HSP90AB4PQ58FF6 505 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 GPATCH3Q96I76 525 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 C8orf37Q96NL8 207 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 FAM107BQ9H098 131 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 TOPAZ1Q8N9V7 1692 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 FAM208AQ9UK61 1670 aaKnown RBP12.04□□□□□ -0.48
MSRB3-201ENST00000308259 KDM4FA0A1W2PPD8 638 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 SLC27A2O14975 620 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 EVCP57679 992 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 EPHA10Q5JZY3 1008 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 SEC62Q99442 399 aaKnown RBP12.04□□□□□ -0.48
MSRB3-201ENST00000308259 AXIN2Q9Y2T1 843 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 FMN2Q9NZ56 1722 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 A0A087WWV3 80 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 JAK2O60674 1132 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 CLNS1AP54105 237 aaKnown RBP12.04□□□□□ -0.48
MSRB3-201ENST00000308259 KSR2Q6VAB6 950 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 ZSWIM6Q9HCJ5 1215 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 NECTIN1Q15223 517 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 VPS53Q5VIR6 699 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 LARP1Q6PKG0 1096 aaKnown RBP12.04□□□□□ -0.48
MSRB3-201ENST00000308259 CARD6Q9BX69 1037 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 ADAM21Q9UKJ8 722 aa12.04□□□□□ -0.48
MSRB3-201ENST00000308259 GRM8O00222 908 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 GBP2P32456 591 aaPredicted RBP12.03□□□□□ -0.48
MSRB3-201ENST00000308259 MUM1L1Q5H9M0 696 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 JAKMIP3Q5VZ66 844 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 EVI5LQ96CN4 794 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 ADGRL3Q9HAR2 1447 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 CEMIPQ8WUJ3 1361 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 TTC41PQ6P2S7 1318 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 CCP110O43303 1012 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 CHRNA2Q15822 529 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 ATP5J2-PTCD1G3V325 749 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 PTCD1O75127 700 aaKnown RBP12.03□□□□□ -0.48
MSRB3-201ENST00000308259 ERLIN1O75477 346 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 SCP2P22307 547 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 IFNL2Q8IZJ0 200 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 MYD88Q99836 296 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 FER1L4A9Z1Z3 1794 aa12.03□□□□□ -0.48
MSRB3-201ENST00000308259 SFPQP23246 707 aaKnown RBP eCLIP12.02□□□□□ -0.48
MSRB3-201ENST00000308259 ATP2B2Q01814 1243 aa12.02□□□□□ -0.48
MSRB3-201ENST00000308259 FMNL3Q8IVF7 1028 aa12.02□□□□□ -0.48
MSRB3-201ENST00000308259 DYDC1Q8WWB3 177 aa12.02□□□□□ -0.48
MSRB3-201ENST00000308259 N4BP2L2Q92802 583 aaPredicted RBP12.02□□□□□ -0.48
MSRB3-201ENST00000308259 VEZTQ9HBM0 779 aa12.02□□□□□ -0.48
MSRB3-201ENST00000308259 TYRO3Q06418 890 aa12.02□□□□□ -0.49
MSRB3-201ENST00000308259 BLOC1S2Q6QNY1 142 aa12.02□□□□□ -0.49
MSRB3-201ENST00000308259 CERKQ8TCT0 537 aa12.02□□□□□ -0.49
MSRB3-201ENST00000308259 CACTINQ8WUQ7 758 aaKnown RBP12.02□□□□□ -0.49
MSRB3-201ENST00000308259 DNAJC25Q9H1X3 360 aa12.02□□□□□ -0.49
MSRB3-201ENST00000308259 RNF187Q5TA31 235 aaPredicted RBP12.02□□□□□ -0.49
MSRB3-201ENST00000308259 NAIF1Q69YI7 327 aaPredicted RBP12.02□□□□□ -0.49
MSRB3-201ENST00000308259 TMEM87AQ8NBN3 555 aa12.02□□□□□ -0.49
MSRB3-201ENST00000308259 DACT1Q9NYF0 836 aa12.02□□□□□ -0.49
MSRB3-201ENST00000308259 USP16Q9Y5T5 823 aa12.02□□□□□ -0.49
MSRB3-201ENST00000308259 PXDNQ92626 1479 aa12.02□□□□□ -0.49
MSRB3-201ENST00000308259 PPP1R12AO14974 1030 aaPredicted RBP12.02□□□□□ -0.49
MSRB3-201ENST00000308259 SMARCC1Q92922 1105 aaPredicted RBP12.02□□□□□ -0.49
MSRB3-201ENST00000308259 NUCKS1Q9H1E3 243 aaKnown RBP12.02□□□□□ -0.49
MSRB3-201ENST00000308259 IGKV5-2P06315 115 aa12.01□□□□□ -0.49
MSRB3-201ENST00000308259 TMOD3Q9NYL9 352 aa12.01□□□□□ -0.49
MSRB3-201ENST00000308259 EBAG9O00559 213 aa12.01□□□□□ -0.49
MSRB3-201ENST00000308259 XAGE3Q8WTP9 111 aa12.01□□□□□ -0.49
MSRB3-201ENST00000308259 DDX17Q92841 729 aaKnown RBP12.01□□□□□ -0.49
MSRB3-201ENST00000308259 ZNF446Q9NWS9 450 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms