RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 MAST3O60307 1309 aa21.03■□□□□ 0.96
KRT28-201ENST00000306658 LRRC37AA6NMS7 1700 aa21.03■□□□□ 0.96
KRT28-201ENST00000306658 NECTIN1Q15223 517 aa21.02■□□□□ 0.96
KRT28-201ENST00000306658 SLFNL1Q499Z3 407 aa21.02■□□□□ 0.96
KRT28-201ENST00000306658 RNF20Q5VTR2 975 aa21.02■□□□□ 0.96
KRT28-201ENST00000306658 CCDC129Q6ZRS4 1044 aa21.02■□□□□ 0.96
KRT28-201ENST00000306658 TXNRD3Q86VQ6 643 aa21.02■□□□□ 0.96
KRT28-201ENST00000306658 HSCBQ8IWL3 235 aa21.02■□□□□ 0.96
KRT28-201ENST00000306658 CNKSR1Q969H4 720 aa21.02■□□□□ 0.96
KRT28-201ENST00000306658 TBC1D2Q9BYX2 928 aa21.02■□□□□ 0.96
KRT28-201ENST00000306658 PALD1Q9ULE6 856 aa21.02■□□□□ 0.96
KRT28-201ENST00000306658 PDE6AP16499 860 aa21.02■□□□□ 0.95
KRT28-201ENST00000306658 ZKSCAN1P17029 563 aaPredicted RBP21.02■□□□□ 0.95
KRT28-201ENST00000306658 SLC51AQ86UW1 340 aa21.02■□□□□ 0.95
KRT28-201ENST00000306658 TBC1D16Q8TBP0 767 aa21.02■□□□□ 0.95
KRT28-201ENST00000306658 U3KPZ7 1027 aaPredicted RBP21.02■□□□□ 0.95
KRT28-201ENST00000306658 PRPF40BQ6NWY9 871 aaKnown RBP21.01■□□□□ 0.95
KRT28-201ENST00000306658 MPNDQ8N594 471 aa21.01■□□□□ 0.95
KRT28-201ENST00000306658 DSCC1Q9BVC3 393 aa21.01■□□□□ 0.95
KRT28-201ENST00000306658 DOCK2Q92608 1830 aa21.01■□□□□ 0.95
KRT28-201ENST00000306658 MYO5AQ9Y4I1 1855 aaKnown RBP21■□□□□ 0.95
KRT28-201ENST00000306658 C6orf229H3BNL8 230 aa21■□□□□ 0.95
KRT28-201ENST00000306658 M0R2C6 588 aa21■□□□□ 0.95
KRT28-201ENST00000306658 ST18O60284 1047 aa21■□□□□ 0.95
KRT28-201ENST00000306658 SLC4A3P48751 1232 aa21■□□□□ 0.95
KRT28-201ENST00000306658 KCNB2Q92953 911 aa21■□□□□ 0.95
KRT28-201ENST00000306658 ABCF2Q9UG63 623 aa21■□□□□ 0.95
KRT28-201ENST00000306658 POLLQ9UGP5 575 aa21■□□□□ 0.95
KRT28-201ENST00000306658 WWC3Q9ULE0 1092 aa21■□□□□ 0.95
KRT28-201ENST00000306658 SNX14Q9Y5W7 946 aa21■□□□□ 0.95
KRT28-201ENST00000306658 ZNF532Q9HCE3 1301 aa21■□□□□ 0.95
KRT28-201ENST00000306658 MAGEB6Q8N7X4 407 aa20.99■□□□□ 0.95
KRT28-201ENST00000306658 PUS7LQ9H0K6 701 aaKnown RBP20.99■□□□□ 0.95
KRT28-201ENST00000306658 C10orf71Q711Q0 1435 aa20.99■□□□□ 0.95
KRT28-201ENST00000306658 MYH13Q9UKX3 1938 aa20.99■□□□□ 0.95
KRT28-201ENST00000306658 TCRBV5S4A2TA0A5A2 114 aa20.99■□□□□ 0.95
KRT28-201ENST00000306658 CHRNA5P30532 468 aa20.99■□□□□ 0.95
KRT28-201ENST00000306658 CREB3L3Q68CJ9 461 aa20.99■□□□□ 0.95
KRT28-201ENST00000306658 TDRD7Q8NHU6 1098 aaKnown RBP20.99■□□□□ 0.95
KRT28-201ENST00000306658 MTFR1LQ9H019 292 aa20.99■□□□□ 0.95
KRT28-201ENST00000306658 COL1A1P02452 1464 aaPredicted RBP20.98■□□□□ 0.95
KRT28-201ENST00000306658 HSPD1P10809 573 aaKnown RBP20.98■□□□□ 0.95
KRT28-201ENST00000306658 POLD1P28340 1107 aa20.98■□□□□ 0.95
KRT28-201ENST00000306658 DPP8Q6V1X1 898 aaPredicted RBP20.98■□□□□ 0.95
KRT28-201ENST00000306658 RASEFQ8IZ41 740 aa20.98■□□□□ 0.95
KRT28-201ENST00000306658 RAI14Q9P0K7 980 aa20.98■□□□□ 0.95
KRT28-201ENST00000306658 SLC27A2O14975 620 aa20.97■□□□□ 0.95
KRT28-201ENST00000306658 GPAA1O43292 621 aa20.97■□□□□ 0.95
KRT28-201ENST00000306658 ZBTB7AO95365 584 aa20.97■□□□□ 0.95
KRT28-201ENST00000306658 NEK4P51957 841 aa20.97■□□□□ 0.95
KRT28-201ENST00000306658 ZGPATQ8N5A5 531 aaKnown RBP20.97■□□□□ 0.95
KRT28-201ENST00000306658 WDR66Q8TBY9 1149 aa20.97■□□□□ 0.95
KRT28-201ENST00000306658 GPR101Q96P66 508 aaPredicted RBP20.97■□□□□ 0.95
KRT28-201ENST00000306658 IGSF3O75054 1194 aa20.96■□□□□ 0.95
KRT28-201ENST00000306658 CHAF1AQ13111 956 aaPredicted RBP20.96■□□□□ 0.95
KRT28-201ENST00000306658 LTBP1Q14766 1721 aa20.96■□□□□ 0.95
KRT28-201ENST00000306658 SPTY2D1Q68D10 685 aaPredicted RBP20.96■□□□□ 0.95
KRT28-201ENST00000306658 TMED8Q6PL24 325 aaPredicted RBP20.96■□□□□ 0.95
KRT28-201ENST00000306658 ERICH6Q7L0X2 663 aa20.96■□□□□ 0.95
KRT28-201ENST00000306658 AIDAQ96BJ3 306 aa20.96■□□□□ 0.95
KRT28-201ENST00000306658 IL1R1P14778 569 aa20.96■□□□□ 0.95
KRT28-201ENST00000306658 R3HDM1Q15032 1099 aaKnown RBP20.96■□□□□ 0.95
KRT28-201ENST00000306658 VPS53Q5VIR6 699 aa20.96■□□□□ 0.95
KRT28-201ENST00000306658 ZC3H12CQ9C0D7 883 aaKnown RBP20.96■□□□□ 0.95
KRT28-201ENST00000306658 CD209Q9NNX6 404 aa20.96■□□□□ 0.95
KRT28-201ENST00000306658 TSGA10IPQ3SY00 556 aa20.95■□□□□ 0.94
KRT28-201ENST00000306658 CC2D2BQ6DHV5 1058 aa20.95■□□□□ 0.94
KRT28-201ENST00000306658 EYA3Q99504 573 aa20.95■□□□□ 0.94
KRT28-201ENST00000306658 TM6SF1Q9BZW5 370 aa20.95■□□□□ 0.94
KRT28-201ENST00000306658 CTNNA3Q9UI47 895 aa20.95■□□□□ 0.94
KRT28-201ENST00000306658 CACNA1SQ13698 1873 aa20.95■□□□□ 0.94
KRT28-201ENST00000306658 SALL1Q9NSC2 1324 aa20.94■□□□□ 0.94
KRT28-201ENST00000306658 K7ELQ4 463 aaPredicted RBP20.94■□□□□ 0.94
KRT28-201ENST00000306658 PSMA5P28066 241 aa20.94■□□□□ 0.94
KRT28-201ENST00000306658 KRT32Q14532 448 aa20.94■□□□□ 0.94
KRT28-201ENST00000306658 ATF5Q9Y2D1 282 aaPredicted RBP20.94■□□□□ 0.94
KRT28-201ENST00000306658 CYP7A1P22680 504 aa20.93■□□□□ 0.94
KRT28-201ENST00000306658 MCM2P49736 904 aa20.93■□□□□ 0.94
KRT28-201ENST00000306658 OLFM4Q6UX06 510 aa20.93■□□□□ 0.94
KRT28-201ENST00000306658 COA1Q9GZY4 146 aa20.93■□□□□ 0.94
KRT28-201ENST00000306658 SLX4Q8IY92 1834 aa20.93■□□□□ 0.94
KRT28-201ENST00000306658 CD2BP2O95400 341 aaKnown RBP20.93■□□□□ 0.94
KRT28-201ENST00000306658 NAA16Q6N069 864 aaPredicted RBP20.93■□□□□ 0.94
KRT28-201ENST00000306658 STRBPQ96SI9 672 aaKnown RBP20.93■□□□□ 0.94
KRT28-201ENST00000306658 CASTP20810 708 aaKnown RBP20.92■□□□□ 0.94
KRT28-201ENST00000306658 GRIPAP1Q4V328 841 aa20.92■□□□□ 0.94
KRT28-201ENST00000306658 TTLL6Q8N841 843 aa20.92■□□□□ 0.94
KRT28-201ENST00000306658 JAKMIP1Q96N16 626 aaKnown RBP20.92■□□□□ 0.94
KRT28-201ENST00000306658 UPF3BQ9BZI7 483 aaKnown RBP20.92■□□□□ 0.94
KRT28-201ENST00000306658 RIMBP2O15034 1052 aa20.91■□□□□ 0.94
KRT28-201ENST00000306658 GNAT2P19087 354 aa20.91■□□□□ 0.94
KRT28-201ENST00000306658 C7orf43Q8WVR3 580 aa20.91■□□□□ 0.94
KRT28-201ENST00000306658 MBD4O95243 580 aa20.9■□□□□ 0.94
KRT28-201ENST00000306658 CYP21A2P08686 494 aa20.9■□□□□ 0.94
KRT28-201ENST00000306658 TGFB2P61812 414 aa20.9■□□□□ 0.94
KRT28-201ENST00000306658 ADCK5Q3MIX3 580 aa20.9■□□□□ 0.94
KRT28-201ENST00000306658 NSUN4Q96CB9 384 aaKnown RBP20.9■□□□□ 0.94
KRT28-201ENST00000306658 ZSWIM6Q9HCJ5 1215 aa20.9■□□□□ 0.94
KRT28-201ENST00000306658 CYP46A1Q9Y6A2 500 aa20.9■□□□□ 0.94
KRT28-201ENST00000306658 DLEC1Q9Y238 1755 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms