RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 POLR2AP24928 1970 aaKnown RBP13.54□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 RAB11FIP3O75154 756 aa13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 TIMM10P62072 90 aa13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 FKBP1AP62942 108 aaKnown RBP13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 TNNI3KQ59H18 835 aa13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 LDHDQ86WU2 507 aa13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 SIRT2Q8IXJ6 389 aa13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 SMC1BQ8NDV3 1235 aa13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 TBC1D22AQ8WUA7 517 aa13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 KIF1BPQ96EK5 621 aa13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 XAGE2Q96GT9 111 aa13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 JAG2Q9Y219 1238 aa13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 FPGT-TNNI3KV9GXZ4 949 aa13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 FAM205AQ6ZU69 1335 aa13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 TRPM7Q96QT4 1865 aa13.53□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 SEMA3EO15041 775 aa13.52□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 USP17L8P0C7I0 530 aa13.52□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 ADORA1P30542 326 aa13.52□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 PHKA1P46020 1223 aa13.52□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 KIF4BQ2VIQ3 1234 aa13.52□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 MFSD14BQ5SR56 506 aa13.52□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 CCDC102BQ68D86 513 aa13.52□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 CLASRPQ8N2M8 674 aaKnown RBP13.52□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 RHPN1Q8TCX5 695 aa13.52□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 MXD3Q9BW11 206 aa13.52□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 DENND2AQ9ULE3 1009 aa13.52□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 AKAP11Q9UKA4 1901 aa13.51□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 MYH2Q9UKX2 1941 aa13.51□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 MAST2Q6P0Q8 1798 aa13.51□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 CENPBP07199 599 aaPredicted RBP13.51□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 MMP14P50281 582 aa13.51□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 CCDC158Q5M9N0 1113 aa13.51□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 TTC39AQ5SRH9 613 aa13.51□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 KIAA0825Q8IV33 1275 aa13.51□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 BCL11AQ9H165 835 aa13.51□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 COL1A1P02452 1464 aaPredicted RBP13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 MAST3O60307 1309 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 SHTN1A0MZ66 631 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 F8W031 263 aaPredicted RBP13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 UQCRFS1P1P0C7P4 283 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 FSTL1Q12841 308 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 TBC1D10BQ4KMP7 808 aaPredicted RBP13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 RBM26Q5T8P6 1007 aaKnown RBP13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 CHADLQ6NUI6 762 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 AACSQ86V21 672 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 EXOC6Q8TAG9 804 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 WDR66Q8TBY9 1149 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 TRPM4Q8TD43 1214 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 GMLQ99445 158 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 LRRCC1Q9C099 1032 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 IL1RAPL2Q9NP60 686 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 MYOZ2Q9NPC6 264 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 ZBTB47Q9UFB7 747 aaPredicted RBP13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 PCDHB15Q9Y5E8 787 aa13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.5□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 MYO5AQ9Y4I1 1855 aaKnown RBP13.49□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 IFIT2P09913 472 aaKnown RBP13.49□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 POTEJP0CG39 1038 aa13.49□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 ZNF280AP59817 542 aaPredicted RBP13.49□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 C1QTNF8P60827 252 aa13.49□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 IRX6P78412 446 aaPredicted RBP13.49□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 SAMD7Q7Z3H4 446 aa13.49□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 ZGPATQ8N5A5 531 aaKnown RBP13.49□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 DBNDD2Q9BQY9 259 aa13.49□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 ARID4AP29374 1257 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 CERS5Q8N5B7 392 aa13.48□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 CCDC8Q9H0W5 538 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 TTF2Q9UNY4 1162 aaKnown RBP13.48□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 SUGT1Q9Y2Z0 365 aa13.48□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 MYH7P12883 1935 aa13.48□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 DOCK2Q92608 1830 aa13.48□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 PDS5AQ29RF7 1337 aaKnown RBP13.47□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 ZBTB22O15209 634 aa13.47□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 RBM5P52756 815 aaKnown RBP eCLIP13.47□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 RASGRF1Q13972 1273 aa13.47□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 ZC3H15Q8WU90 426 aaKnown RBP13.47□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 EAF2Q96CJ1 260 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 DCTPP1Q9H773 170 aa13.47□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 DBNLQ9UJU6 430 aaKnown RBP13.47□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 SALL1Q9NSC2 1324 aa13.46□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 MYO1BO43795 1136 aa13.46□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 LDHBP07195 334 aaKnown RBP13.46□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 HDAC1Q13547 482 aaPredicted RBP13.46□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 DLGAP5Q15398 846 aa13.46□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 MAP1SQ66K74 1059 aaPredicted RBP13.46□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 SPATA5Q8NB90 893 aa13.46□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 DCPSQ96C86 337 aaKnown RBP13.46□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 RWDD1Q9H446 243 aaPredicted RBP13.46□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 TLR7Q9NYK1 1049 aaKnown RBP13.46□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 GGA3Q9NZ52 723 aa13.46□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 ABCF2Q9UG63 623 aa13.46□□□□□ -0.25
CSPG4P1Y-201ENST00000306641 AK9Q5TCS8 1911 aa13.45□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 EGFRP00533 1210 aa13.45□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 MCAMP43121 646 aa13.45□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 HIRAP54198 1017 aaPredicted RBP13.45□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 CFAP100Q494V2 611 aa13.45□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 SPTY2D1Q68D10 685 aaPredicted RBP13.45□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 DZIP1Q86YF9 867 aaKnown RBP13.45□□□□□ -0.26
CSPG4P1Y-201ENST00000306641 CNTROBQ8N137 903 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms