RNA–Protein interactions for RNA: ENST00000303795.8

APLF-201, Transcript of aprataxin and PNKP like factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLF, Length 3,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-201ENST00000303795 MCMDC2Q4G0Z9 681 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 TMCO3Q6UWJ1 677 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 SLC26A6Q9BXS9 759 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 C19orf44Q9H6X5 657 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 BTG4Q9NY30 223 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 SKILP12757 684 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 TNNI3KQ59H18 835 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 TAF6LQ9Y6J9 622 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 FPGT-TNNI3KV9GXZ4 949 aa13.76□□□□□ -0.21
APLF-201ENST00000303795 FAM170AA1A519 330 aa13.75□□□□□ -0.21
APLF-201ENST00000303795 LMOD1P29536 600 aaPredicted RBP13.75□□□□□ -0.21
APLF-201ENST00000303795 FAM200AQ8TCP9 573 aa13.75□□□□□ -0.21
APLF-201ENST00000303795 SH2B1Q9NRF2 756 aaPredicted RBP13.75□□□□□ -0.21
APLF-201ENST00000303795 PAXBP1Q9Y5B6 917 aa13.75□□□□□ -0.21
APLF-201ENST00000303795 NPHP3Q7Z494 1330 aa13.75□□□□□ -0.21
APLF-201ENST00000303795 HSPA4P34932 840 aa13.75□□□□□ -0.21
APLF-201ENST00000303795 L2HGDHQ9H9P8 463 aa13.75□□□□□ -0.21
APLF-201ENST00000303795 CACTINQ8WUQ7 758 aaKnown RBP13.75□□□□□ -0.21
APLF-201ENST00000303795 PHKBQ93100 1093 aa13.75□□□□□ -0.21
APLF-201ENST00000303795 ZNF396Q96N95 335 aaPredicted RBP13.75□□□□□ -0.21
APLF-201ENST00000303795 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.75□□□□□ -0.21
APLF-201ENST00000303795 VAT1LQ9HCJ6 419 aa13.75□□□□□ -0.21
APLF-201ENST00000303795 CFAP45Q9UL16 551 aa13.75□□□□□ -0.21
APLF-201ENST00000303795 NEURL1BA8MQ27 555 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 ANAPC15P60006 121 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 TYRO3Q06418 890 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 UBAC1Q9BSL1 405 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 LCMT1Q9UIC8 334 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 LRRC37A3O60309 1634 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 PTPDC1A2A3K4 754 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 EXOC5O00471 708 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 ALDH1L1O75891 902 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 URI1O94763 535 aaPredicted RBP13.74□□□□□ -0.21
APLF-201ENST00000303795 LMAN1P49257 510 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 BMS1Q14692 1282 aaKnown RBP13.74□□□□□ -0.21
APLF-201ENST00000303795 DBNLQ9UJU6 430 aaKnown RBP13.74□□□□□ -0.21
APLF-201ENST00000303795 MYO5BQ9ULV0 1848 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 SASH1O94885 1247 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 ADORA1P30542 326 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 KRT32Q14532 448 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 NOC3LQ8WTT2 800 aaKnown RBP13.74□□□□□ -0.21
APLF-201ENST00000303795 RSPH14Q9UHP6 348 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 ASAP1Q9ULH1 1129 aa13.74□□□□□ -0.21
APLF-201ENST00000303795 CCDC34Q96HJ3 373 aa13.73□□□□□ -0.21
APLF-201ENST00000303795 SCAND2PQ9GZW5 306 aaPredicted RBP13.73□□□□□ -0.21
APLF-201ENST00000303795 SLC52A2Q9HAB3 445 aa13.73□□□□□ -0.21
APLF-201ENST00000303795 GEMIN8Q9NWZ8 242 aaKnown RBP13.73□□□□□ -0.21
APLF-201ENST00000303795 B4E1Z4 1266 aa13.73□□□□□ -0.21
APLF-201ENST00000303795 ANKRD18BA2A2Z9 1011 aa13.73□□□□□ -0.21
APLF-201ENST00000303795 ZAP70P43403 619 aa13.73□□□□□ -0.21
APLF-201ENST00000303795 TMEM67Q5HYA8 995 aa13.73□□□□□ -0.21
APLF-201ENST00000303795 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
APLF-201ENST00000303795 IGSF1Q8N6C5 1336 aa13.73□□□□□ -0.21
APLF-201ENST00000303795 PRC1O43663 620 aa13.72□□□□□ -0.21
APLF-201ENST00000303795 MEX3CQ5U5Q3 659 aaKnown RBP13.72□□□□□ -0.21
APLF-201ENST00000303795 SECISBP2LQ93073 1101 aaKnown RBP13.72□□□□□ -0.21
APLF-201ENST00000303795 CWC15Q9P013 229 aaKnown RBP13.72□□□□□ -0.21
APLF-201ENST00000303795 ADGRL3Q9HAR2 1447 aa13.72□□□□□ -0.21
APLF-201ENST00000303795 GTF2A1P52655 376 aaPredicted RBP13.72□□□□□ -0.21
APLF-201ENST00000303795 CCZ1BP86790 482 aa13.72□□□□□ -0.21
APLF-201ENST00000303795 CCZ1P86791 482 aaPredicted RBP13.72□□□□□ -0.21
APLF-201ENST00000303795 ARHGAP29Q52LW3 1261 aa13.72□□□□□ -0.21
APLF-201ENST00000303795 REXO1L1PQ8IX06 675 aa13.72□□□□□ -0.21
APLF-201ENST00000303795 AOPEPQ8N6M6 819 aa13.72□□□□□ -0.21
APLF-201ENST00000303795 STAMQ92783 540 aa13.72□□□□□ -0.21
APLF-201ENST00000303795 PLIN2Q99541 437 aa13.72□□□□□ -0.21
APLF-201ENST00000303795 METTL22Q9BUU2 404 aaPredicted RBP13.72□□□□□ -0.21
APLF-201ENST00000303795 ERCC3P19447 782 aa13.72□□□□□ -0.21
APLF-201ENST00000303795 OLFM4Q6UX06 510 aa13.72□□□□□ -0.21
APLF-201ENST00000303795 KRBA2Q6ZNG9 492 aa13.72□□□□□ -0.21
APLF-201ENST00000303795 CADPS2Q86UW7 1296 aa13.72□□□□□ -0.21
APLF-201ENST00000303795 CCDC191Q8NCU4 936 aa13.72□□□□□ -0.21
APLF-201ENST00000303795 GOLGA8AA7E2F4 631 aa13.71□□□□□ -0.21
APLF-201ENST00000303795 AFMP43652 599 aa13.71□□□□□ -0.21
APLF-201ENST00000303795 ERCC6LQ2NKX8 1250 aa13.71□□□□□ -0.21
APLF-201ENST00000303795 TMC6Q7Z403 805 aa13.71□□□□□ -0.21
APLF-201ENST00000303795 TTC6Q86TZ1 520 aa13.71□□□□□ -0.21
APLF-201ENST00000303795 EFCC1Q9HA90 598 aa13.71□□□□□ -0.21
APLF-201ENST00000303795 USP6P35125 1406 aa13.71□□□□□ -0.21
APLF-201ENST00000303795 SLU7O95391 586 aaKnown RBP13.71□□□□□ -0.21
APLF-201ENST00000303795 CDC25BP30305 580 aa13.71□□□□□ -0.21
APLF-201ENST00000303795 SART3Q15020 963 aaKnown RBP13.71□□□□□ -0.21
APLF-201ENST00000303795 CEP57L1Q8IYX8 460 aa13.71□□□□□ -0.21
APLF-201ENST00000303795 ZHX3Q9H4I2 956 aa13.71□□□□□ -0.21
APLF-201ENST00000303795 F8W031 263 aaPredicted RBP13.71□□□□□ -0.22
APLF-201ENST00000303795 USP5P45974 858 aa13.71□□□□□ -0.22
APLF-201ENST00000303795 STX17P56962 302 aa13.71□□□□□ -0.22
APLF-201ENST00000303795 ENOX2Q16206 610 aaKnown RBP13.71□□□□□ -0.22
APLF-201ENST00000303795 TDRD7Q8NHU6 1098 aaKnown RBP13.71□□□□□ -0.22
APLF-201ENST00000303795 MLH3Q9UHC1 1453 aa13.71□□□□□ -0.22
APLF-201ENST00000303795 SSBP05455 408 aaKnown RBP eCLIP13.7□□□□□ -0.22
APLF-201ENST00000303795 ATP6V1AP38606 617 aa13.7□□□□□ -0.22
APLF-201ENST00000303795 IGHMBP2P38935 993 aaKnown RBP13.7□□□□□ -0.22
APLF-201ENST00000303795 EEF2KMTQ96G04 330 aa13.7□□□□□ -0.22
APLF-201ENST00000303795 MON2Q7Z3U7 1717 aa13.7□□□□□ -0.22
APLF-201ENST00000303795 IRS4O14654 1257 aaPredicted RBP13.7□□□□□ -0.22
APLF-201ENST00000303795 DNA2P51530 1060 aa13.7□□□□□ -0.22
APLF-201ENST00000303795 ZNF75DP51815 510 aa13.7□□□□□ -0.22
APLF-201ENST00000303795 IKQ13123 557 aaPredicted RBP13.7□□□□□ -0.22
APLF-201ENST00000303795 SYT10Q6XYQ8 523 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms