RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ZSWIM6Q9HCJ5 1215 aa18.78■□□□□ 0.6
HERPUD1-201ENST00000300302 CHMP5Q9NZZ3 219 aa18.78■□□□□ 0.6
HERPUD1-201ENST00000300302 DENND2AQ9ULE3 1009 aa18.78■□□□□ 0.6
HERPUD1-201ENST00000300302 XDHP47989 1333 aa18.78■□□□□ 0.6
HERPUD1-201ENST00000300302 DOCK2Q92608 1830 aa18.78■□□□□ 0.6
HERPUD1-201ENST00000300302 PDE6AP16499 860 aa18.77■□□□□ 0.6
HERPUD1-201ENST00000300302 FBXO33Q7Z6M2 555 aa18.77■□□□□ 0.6
HERPUD1-201ENST00000300302 WTIPA6NIX2 430 aaPredicted RBP18.77■□□□□ 0.6
HERPUD1-201ENST00000300302 HIBADHP31937 336 aaKnown RBP18.77■□□□□ 0.6
HERPUD1-201ENST00000300302 ADCK5Q3MIX3 580 aa18.77■□□□□ 0.6
HERPUD1-201ENST00000300302 RUFY3Q7L099 469 aa18.77■□□□□ 0.6
HERPUD1-201ENST00000300302 TMC4Q7Z404 712 aa18.77■□□□□ 0.6
HERPUD1-201ENST00000300302 PUS7LQ9H0K6 701 aaKnown RBP18.77■□□□□ 0.6
HERPUD1-201ENST00000300302 ZNF532Q9HCE3 1301 aa18.77■□□□□ 0.59
HERPUD1-201ENST00000300302 RPAP1Q9BWH6 1393 aaPredicted RBP18.77■□□□□ 0.59
HERPUD1-201ENST00000300302 FRAT2O75474 233 aaPredicted RBP18.76■□□□□ 0.59
HERPUD1-201ENST00000300302 PDE6BP35913 854 aa18.76■□□□□ 0.59
HERPUD1-201ENST00000300302 LRP2BPQ9P2M1 347 aa18.76■□□□□ 0.59
HERPUD1-201ENST00000300302 CTNNA3Q9UI47 895 aa18.76■□□□□ 0.59
HERPUD1-201ENST00000300302 CIZ1Q9ULV3 898 aaPredicted RBP18.76■□□□□ 0.59
HERPUD1-201ENST00000300302 QSER1Q2KHR3 1735 aa18.76■□□□□ 0.59
HERPUD1-201ENST00000300302 GPAA1O43292 621 aa18.75■□□□□ 0.59
HERPUD1-201ENST00000300302 VPS53Q5VIR6 699 aa18.75■□□□□ 0.59
HERPUD1-201ENST00000300302 TTC14Q96N46 770 aa18.75■□□□□ 0.59
HERPUD1-201ENST00000300302 WWC3Q9ULE0 1092 aa18.75■□□□□ 0.59
HERPUD1-201ENST00000300302 IQSEC3Q9UPP2 1182 aaPredicted RBP18.75■□□□□ 0.59
HERPUD1-201ENST00000300302 PDS5AQ29RF7 1337 aaKnown RBP18.75■□□□□ 0.59
HERPUD1-201ENST00000300302 TCRBV5S4A2TA0A5A2 114 aa18.75■□□□□ 0.59
HERPUD1-201ENST00000300302 ZBTB22O15209 634 aa18.75■□□□□ 0.59
HERPUD1-201ENST00000300302 MAGEB6Q8N7X4 407 aa18.75■□□□□ 0.59
HERPUD1-201ENST00000300302 TMX3Q96JJ7 454 aa18.75■□□□□ 0.59
HERPUD1-201ENST00000300302 PDRG1Q9NUG6 133 aa18.75■□□□□ 0.59
HERPUD1-201ENST00000300302 MYO5AQ9Y4I1 1855 aaKnown RBP18.75■□□□□ 0.59
HERPUD1-201ENST00000300302 CYP21A2P08686 494 aa18.74■□□□□ 0.59
HERPUD1-201ENST00000300302 DDIT3P35638 169 aa18.74■□□□□ 0.59
HERPUD1-201ENST00000300302 BLOC1S2Q6QNY1 142 aa18.74■□□□□ 0.59
HERPUD1-201ENST00000300302 ANKRD31Q8N7Z5 1873 aa18.74■□□□□ 0.59
HERPUD1-201ENST00000300302 NPR1P16066 1061 aa18.73■□□□□ 0.59
HERPUD1-201ENST00000300302 KLRK1P26718 216 aa18.73■□□□□ 0.59
HERPUD1-201ENST00000300302 AIDAQ96BJ3 306 aa18.73■□□□□ 0.59
HERPUD1-201ENST00000300302 CWC22Q9HCG8 908 aaKnown RBP18.73■□□□□ 0.59
HERPUD1-201ENST00000300302 FOXD4L1Q9NU39 408 aa18.73■□□□□ 0.59
HERPUD1-201ENST00000300302 ATP2B4P23634 1241 aa18.73■□□□□ 0.59
HERPUD1-201ENST00000300302 AK2P54819 239 aa18.73■□□□□ 0.59
HERPUD1-201ENST00000300302 ABCF2Q9UG63 623 aa18.73■□□□□ 0.59
HERPUD1-201ENST00000300302 NSFL1CQ9UNZ2 370 aaKnown RBP18.73■□□□□ 0.59
HERPUD1-201ENST00000300302 SRGNP10124 158 aa18.72■□□□□ 0.59
HERPUD1-201ENST00000300302 GPSM2P81274 684 aa18.72■□□□□ 0.59
HERPUD1-201ENST00000300302 C15orf52Q6ZUT6 534 aaKnown RBP18.72■□□□□ 0.59
HERPUD1-201ENST00000300302 NOL8Q76FK4 1167 aaKnown RBP18.72■□□□□ 0.59
HERPUD1-201ENST00000300302 NEK1Q96PY6 1258 aa18.72■□□□□ 0.59
HERPUD1-201ENST00000300302 LIMCH1Q9UPQ0 1083 aa18.72■□□□□ 0.59
HERPUD1-201ENST00000300302 IRS2Q9Y4H2 1338 aa18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 MYH13Q9UKX3 1938 aa18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 PPEF1O14829 653 aaPredicted RBP18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 HMGB1P09429 215 aaKnown RBP18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 CPA1P15085 419 aa18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 ALDH1B1P30837 517 aa18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 ANKRD1Q15327 319 aa18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 IMMTQ16891 758 aaKnown RBP18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 ZNF804AQ7Z570 1209 aa18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 PODXL2Q9NZ53 605 aa18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 GGA1Q9UJY5 639 aa18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 COL1A1P02452 1464 aaPredicted RBP18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 RPS6KB1P23443 525 aa18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 CUL4AQ13619 759 aa18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 INTS4Q96HW7 963 aaKnown RBP18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 ALDH8A1Q9H2A2 487 aaPredicted RBP18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 RAI14Q9P0K7 980 aa18.71■□□□□ 0.59
HERPUD1-201ENST00000300302 UFL1O94874 794 aa18.7■□□□□ 0.58
HERPUD1-201ENST00000300302 NBR1Q14596 966 aa18.7■□□□□ 0.58
HERPUD1-201ENST00000300302 SP8Q8IXZ3 490 aa18.7■□□□□ 0.58
HERPUD1-201ENST00000300302 MASTLQ96GX5 879 aa18.7■□□□□ 0.58
HERPUD1-201ENST00000300302 TAF6LQ9Y6J9 622 aa18.7■□□□□ 0.58
HERPUD1-201ENST00000300302 FGAP02671 866 aa18.69■□□□□ 0.58
HERPUD1-201ENST00000300302 TMED8Q6PL24 325 aaPredicted RBP18.69■□□□□ 0.58
HERPUD1-201ENST00000300302 TXNRD3Q86VQ6 643 aa18.69■□□□□ 0.58
HERPUD1-201ENST00000300302 ZSCAN31Q96LW9 406 aaPredicted RBP18.69■□□□□ 0.58
HERPUD1-201ENST00000300302 STRBPQ96SI9 672 aaKnown RBP18.69■□□□□ 0.58
HERPUD1-201ENST00000300302 LRRC37AA6NMS7 1700 aa18.69■□□□□ 0.58
HERPUD1-201ENST00000300302 FOXP2O15409 715 aa18.69■□□□□ 0.58
HERPUD1-201ENST00000300302 IGSF3O75054 1194 aa18.69■□□□□ 0.58
HERPUD1-201ENST00000300302 APPP05067 770 aa18.69■□□□□ 0.58
HERPUD1-201ENST00000300302 GNAT2P19087 354 aa18.69■□□□□ 0.58
HERPUD1-201ENST00000300302 TMX4Q9H1E5 349 aaPredicted RBP18.69■□□□□ 0.58
HERPUD1-201ENST00000300302 ATP6V0A2Q9Y487 856 aa18.69■□□□□ 0.58
HERPUD1-201ENST00000300302 CYP7A1P22680 504 aa18.68■□□□□ 0.58
HERPUD1-201ENST00000300302 ZGPATQ8N5A5 531 aaKnown RBP18.68■□□□□ 0.58
HERPUD1-201ENST00000300302 SH2B1Q9NRF2 756 aaPredicted RBP18.68■□□□□ 0.58
HERPUD1-201ENST00000300302 ZNF213O14771 459 aa18.67■□□□□ 0.58
HERPUD1-201ENST00000300302 MBD4O95243 580 aa18.67■□□□□ 0.58
HERPUD1-201ENST00000300302 NFKBIBQ15653 356 aa18.67■□□□□ 0.58
HERPUD1-201ENST00000300302 SPTY2D1Q68D10 685 aaPredicted RBP18.67■□□□□ 0.58
HERPUD1-201ENST00000300302 SLC51AQ86UW1 340 aa18.67■□□□□ 0.58
HERPUD1-201ENST00000300302 PATL2C9JE40 543 aaKnown RBP18.67■□□□□ 0.58
HERPUD1-201ENST00000300302 E7EWF7 191 aa18.67■□□□□ 0.58
HERPUD1-201ENST00000300302 CHAF1AQ13111 956 aaPredicted RBP18.67■□□□□ 0.58
HERPUD1-201ENST00000300302 R3HDM1Q15032 1099 aaKnown RBP18.67■□□□□ 0.58
HERPUD1-201ENST00000300302 TTLL5Q6EMB2 1281 aa18.67■□□□□ 0.58
HERPUD1-201ENST00000300302 NAA16Q6N069 864 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms