RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 GOLGA8BA8MQT2 603 aa15.67■□□□□ 0.1
CTDP1-202ENST00000299543 DSCC1Q9BVC3 393 aa15.67■□□□□ 0.1
CTDP1-202ENST00000299543 RGPD5Q99666 1765 aa15.67■□□□□ 0.1
CTDP1-202ENST00000299543 HSPA2P54652 639 aa15.67■□□□□ 0.1
CTDP1-202ENST00000299543 IMMTQ16891 758 aaKnown RBP15.67■□□□□ 0.1
CTDP1-202ENST00000299543 SYTL4Q96C24 671 aaPredicted RBP15.67■□□□□ 0.1
CTDP1-202ENST00000299543 N4BP2Q86UW6 1770 aaPredicted RBP15.67■□□□□ 0.1
CTDP1-202ENST00000299543 SH3TC1Q8TE82 1336 aa15.66■□□□□ 0.1
CTDP1-202ENST00000299543 C8orf76Q96K31 380 aa15.66■□□□□ 0.1
CTDP1-202ENST00000299543 TRMT1Q9NXH9 659 aaKnown RBP15.66■□□□□ 0.1
CTDP1-202ENST00000299543 ORC3Q9UBD5 711 aaPredicted RBP15.66■□□□□ 0.1
CTDP1-202ENST00000299543 CCDC66A2RUB6 948 aa15.66■□□□□ 0.1
CTDP1-202ENST00000299543 PRC1O43663 620 aa15.66■□□□□ 0.1
CTDP1-202ENST00000299543 CCDC144BQ3MJ40 725 aa15.66■□□□□ 0.1
CTDP1-202ENST00000299543 CCDC191Q8NCU4 936 aa15.66■□□□□ 0.1
CTDP1-202ENST00000299543 SMARCC2Q8TAQ2 1214 aa15.66■□□□□ 0.1
CTDP1-202ENST00000299543 CACTINQ8WUQ7 758 aaKnown RBP15.66■□□□□ 0.1
CTDP1-202ENST00000299543 IDH1O75874 414 aaKnown RBP15.66■□□□□ 0.1
CTDP1-202ENST00000299543 FGAP02671 866 aa15.66■□□□□ 0.1
CTDP1-202ENST00000299543 METTL24Q5JXM2 366 aa15.66■□□□□ 0.1
CTDP1-202ENST00000299543 ZSCAN25Q6NSZ9 544 aa15.66■□□□□ 0.1
CTDP1-202ENST00000299543 TNNT1P13805 278 aa15.65■□□□□ 0.1
CTDP1-202ENST00000299543 EXOSC10Q01780 885 aaKnown RBP15.65■□□□□ 0.1
CTDP1-202ENST00000299543 LLPHQ9BRT6 129 aaKnown RBP15.65■□□□□ 0.1
CTDP1-202ENST00000299543 PUS7LQ9H0K6 701 aaKnown RBP15.65■□□□□ 0.1
CTDP1-202ENST00000299543 DDX41Q9UJV9 622 aaKnown RBP15.65■□□□□ 0.1
CTDP1-202ENST00000299543 IFIT5Q13325 482 aaKnown RBP15.65■□□□□ 0.1
CTDP1-202ENST00000299543 GNL2Q13823 731 aaKnown RBP15.65■□□□□ 0.1
CTDP1-202ENST00000299543 AOPEPQ8N6M6 819 aa15.65■□□□□ 0.1
CTDP1-202ENST00000299543 CTIFO43310 598 aaKnown RBP15.64■□□□□ 0.09
CTDP1-202ENST00000299543 ADD1P35611 737 aaKnown RBP15.64■□□□□ 0.09
CTDP1-202ENST00000299543 NAA16Q6N069 864 aaPredicted RBP15.64■□□□□ 0.09
CTDP1-202ENST00000299543 LDHAL6AQ6ZMR3 332 aa15.64■□□□□ 0.09
CTDP1-202ENST00000299543 SYNE3Q6ZMZ3 975 aa15.64■□□□□ 0.09
CTDP1-202ENST00000299543 CNNM1Q9NRU3 951 aa15.64■□□□□ 0.09
CTDP1-202ENST00000299543 RCOR1Q9UKL0 485 aa15.64■□□□□ 0.09
CTDP1-202ENST00000299543 ZNF213O14771 459 aa15.64■□□□□ 0.09
CTDP1-202ENST00000299543 MARCKSP29966 332 aaPredicted RBP15.64■□□□□ 0.09
CTDP1-202ENST00000299543 STX1AQ16623 288 aa15.64■□□□□ 0.09
CTDP1-202ENST00000299543 CADPS2Q86UW7 1296 aa15.64■□□□□ 0.09
CTDP1-202ENST00000299543 HELBQ8NG08 1087 aaPredicted RBP15.64■□□□□ 0.09
CTDP1-202ENST00000299543 TDRD7Q8NHU6 1098 aaKnown RBP15.64■□□□□ 0.09
CTDP1-202ENST00000299543 DENND2AQ9ULE3 1009 aa15.64■□□□□ 0.09
CTDP1-202ENST00000299543 CLIC4Q9Y696 253 aa15.64■□□□□ 0.09
CTDP1-202ENST00000299543 DNAJC10Q8IXB1 793 aa15.64■□□□□ 0.09
CTDP1-202ENST00000299543 PCDHA7Q9UN72 937 aa15.64■□□□□ 0.09
CTDP1-202ENST00000299543 SLIT3O75094 1523 aa15.63■□□□□ 0.09
CTDP1-202ENST00000299543 FEZ1Q99689 392 aa15.63■□□□□ 0.09
CTDP1-202ENST00000299543 TRDNQ13061 729 aa15.63■□□□□ 0.09
CTDP1-202ENST00000299543 KIF18AQ8NI77 898 aa15.63■□□□□ 0.09
CTDP1-202ENST00000299543 TOMM22Q9NS69 142 aa15.63■□□□□ 0.09
CTDP1-202ENST00000299543 TMOD3Q9NYL9 352 aa15.63■□□□□ 0.09
CTDP1-202ENST00000299543 ASAP1Q9ULH1 1129 aa15.63■□□□□ 0.09
CTDP1-202ENST00000299543 FDPSP14324 419 aaKnown RBP15.62■□□□□ 0.09
CTDP1-202ENST00000299543 KIF6Q6ZMV9 814 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 AIFM3Q96NN9 605 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 FAM160A1Q05DH4 1040 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 PCDH11XQ9BZA7 1347 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 PCDH11YQ9BZA8 1340 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 GPAA1O43292 621 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 SMC2O95347 1197 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 NDUFA8P51970 172 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 GABPB1Q06547 395 aaPredicted RBP15.62■□□□□ 0.09
CTDP1-202ENST00000299543 SLC9C2Q5TAH2 1124 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 PLA2G4DQ86XP0 818 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 RGS22Q8NE09 1264 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 ANO10Q9NW15 660 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 AKAP2Q9Y2D5 859 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 CARMIL3Q8ND23 1372 aa15.62■□□□□ 0.09
CTDP1-202ENST00000299543 CRYBG1Q9Y4K1 1723 aa15.61■□□□□ 0.09
CTDP1-202ENST00000299543 LRRFIP1Q32MZ4 808 aaKnown RBP15.61■□□□□ 0.09
CTDP1-202ENST00000299543 KMT5BQ4FZB7 885 aa15.61■□□□□ 0.09
CTDP1-202ENST00000299543 CEP57L1Q8IYX8 460 aa15.61■□□□□ 0.09
CTDP1-202ENST00000299543 MRPS27Q92552 414 aaKnown RBP15.61■□□□□ 0.09
CTDP1-202ENST00000299543 JCADQ9P266 1359 aa15.61■□□□□ 0.09
CTDP1-202ENST00000299543 IL2RBP14784 551 aa15.61■□□□□ 0.09
CTDP1-202ENST00000299543 HNRNPH2P55795 449 aaKnown RBP15.61■□□□□ 0.09
CTDP1-202ENST00000299543 TCIRG1Q13488 830 aa15.61■□□□□ 0.09
CTDP1-202ENST00000299543 SNW1Q13573 536 aaKnown RBP15.61■□□□□ 0.09
CTDP1-202ENST00000299543 NFXL1Q6ZNB6 911 aa15.61■□□□□ 0.09
CTDP1-202ENST00000299543 CCDC82Q8N4S0 544 aa15.61■□□□□ 0.09
CTDP1-202ENST00000299543 ZNF274Q96GC6 653 aaPredicted RBP15.61■□□□□ 0.09
CTDP1-202ENST00000299543 ILDR1Q86SU0 546 aaPredicted RBP15.61■□□□□ 0.09
CTDP1-202ENST00000299543 MICU3Q86XE3 530 aa15.61■□□□□ 0.09
CTDP1-202ENST00000299543 INCENPQ9NQS7 918 aa15.61■□□□□ 0.09
CTDP1-202ENST00000299543 CTAGE5O15320 804 aa15.6■□□□□ 0.09
CTDP1-202ENST00000299543 SKILP12757 684 aa15.6■□□□□ 0.09
CTDP1-202ENST00000299543 GYS2P54840 703 aa15.6■□□□□ 0.09
CTDP1-202ENST00000299543 IQCB1Q15051 598 aa15.6■□□□□ 0.09
CTDP1-202ENST00000299543 RBM43Q6ZSC3 357 aaKnown RBP15.6■□□□□ 0.09
CTDP1-202ENST00000299543 NCOA7Q8NI08 942 aa15.6■□□□□ 0.09
CTDP1-202ENST00000299543 MYL10Q9BUA6 226 aa15.6■□□□□ 0.09
CTDP1-202ENST00000299543 C5P01031 1676 aa15.6■□□□□ 0.09
CTDP1-202ENST00000299543 SPATA31A3Q5VYP0 1347 aa15.6■□□□□ 0.09
CTDP1-202ENST00000299543 SNAP23O00161 211 aa15.6■□□□□ 0.09
CTDP1-202ENST00000299543 USP54Q70EL1 1684 aa15.6■□□□□ 0.09
CTDP1-202ENST00000299543 PALLDQ8WX93 1383 aa15.6■□□□□ 0.09
CTDP1-202ENST00000299543 PHKBQ93100 1093 aa15.59■□□□□ 0.09
CTDP1-202ENST00000299543 GPR108Q9NPR9 543 aa15.59■□□□□ 0.09
CTDP1-202ENST00000299543 SPTLC2O15270 562 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms