RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 WWC3Q9ULE0 1092 aa8.4□□□□□ -1.06
TSC1-201ENST00000298552 CCPG1Q9ULG6 757 aa8.4□□□□□ -1.06
TSC1-201ENST00000298552 C4BPBP20851 252 aa8.4□□□□□ -1.06
TSC1-201ENST00000298552 LRRC23Q53EV4 343 aaPredicted RBP8.4□□□□□ -1.06
TSC1-201ENST00000298552 GGT6Q6P531 493 aa8.4□□□□□ -1.06
TSC1-201ENST00000298552 CCDC88BA6NC98 1476 aa8.4□□□□□ -1.06
TSC1-201ENST00000298552 VPS8Q8N3P4 1428 aa8.4□□□□□ -1.06
TSC1-201ENST00000298552 LRRC37BQ96QE4 947 aa8.4□□□□□ -1.06
TSC1-201ENST00000298552 PLCB1Q9NQ66 1216 aa8.4□□□□□ -1.06
TSC1-201ENST00000298552 CCDC194A0A1B0GVG4 234 aa8.4□□□□□ -1.06
TSC1-201ENST00000298552 SYCE3A1L190 88 aa8.4□□□□□ -1.06
TSC1-201ENST00000298552 KCNA4P22459 653 aa8.4□□□□□ -1.06
TSC1-201ENST00000298552 PPP2R5AQ15172 486 aa8.4□□□□□ -1.06
TSC1-201ENST00000298552 PPME1Q9Y570 386 aa8.4□□□□□ -1.06
TSC1-201ENST00000298552 ABCC8Q09428 1581 aa8.4□□□□□ -1.07
TSC1-201ENST00000298552 ACTN4O43707 911 aaKnown RBP8.4□□□□□ -1.07
TSC1-201ENST00000298552 TBCCQ15814 346 aa8.4□□□□□ -1.07
TSC1-201ENST00000298552 RNF10Q8N5U6 811 aaKnown RBP8.4□□□□□ -1.07
TSC1-201ENST00000298552 VTI1AQ96AJ9 217 aa8.4□□□□□ -1.07
TSC1-201ENST00000298552 EFCAB2Q5VUJ9 269 aa8.4□□□□□ -1.07
TSC1-201ENST00000298552 LARP1BQ659C4 914 aaKnown RBP8.4□□□□□ -1.07
TSC1-201ENST00000298552 BBOF1Q8ND07 529 aa8.4□□□□□ -1.07
TSC1-201ENST00000298552 FAM204AQ9H8W3 233 aa8.4□□□□□ -1.07
TSC1-201ENST00000298552 CCDC26Q8TAB7 109 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 ZNF212Q9UDV6 495 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 ATP6V0A2Q9Y487 856 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 MYCNP04198 464 aaPredicted RBP8.39□□□□□ -1.07
TSC1-201ENST00000298552 DDX42Q86XP3 938 aaKnown RBP eCLIP8.39□□□□□ -1.07
TSC1-201ENST00000298552 TRIM56Q9BRZ2 755 aaKnown RBP8.39□□□□□ -1.07
TSC1-201ENST00000298552 MKNK2Q9HBH9 465 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 PPP1R12AO14974 1030 aaPredicted RBP8.39□□□□□ -1.07
TSC1-201ENST00000298552 RFWD2Q8NHY2 731 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 TSPYL4Q9UJ04 414 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 CCT4P50991 539 aaKnown RBP8.39□□□□□ -1.07
TSC1-201ENST00000298552 BLOC1S2Q6QNY1 142 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 BEGAINQ9BUH8 593 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 SMCO2A6NFE2 343 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 FIBPO43427 364 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 TTC4O95801 387 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 CEP57Q86XR8 500 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 CCDC18Q5T9S5 1454 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 ELL2O00472 640 aaPredicted RBP8.39□□□□□ -1.07
TSC1-201ENST00000298552 STX10O60499 249 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 CATIPQ7Z7H3 387 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 SPDL1Q96EA4 605 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 NAP1L4Q99733 375 aaKnown RBP8.39□□□□□ -1.07
TSC1-201ENST00000298552 NACA2Q9H009 215 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 SCINQ9Y6U3 715 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 FANCIQ9NVI1 1328 aa8.39□□□□□ -1.07
TSC1-201ENST00000298552 PLIN1O60240 522 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 PPP1R2P41236 205 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 ZGPATQ8N5A5 531 aaKnown RBP8.38□□□□□ -1.07
TSC1-201ENST00000298552 HAUS1Q96CS2 278 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 BCL11BQ9C0K0 894 aaPredicted RBP8.38□□□□□ -1.07
TSC1-201ENST00000298552 TYW5A2RUC4 315 aaKnown RBP8.38□□□□□ -1.07
TSC1-201ENST00000298552 TMEM57Q8N5G2 664 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 TTC25Q96NG3 672 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 CABP5Q9NP86 173 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 PLEKHO1Q53GL0 409 aaPredicted RBP8.38□□□□□ -1.07
TSC1-201ENST00000298552 CXorf38Q8TB03 319 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 PIP4K2CQ8TBX8 421 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 GCC1Q96CN9 775 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 NEK1Q96PY6 1258 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 BAG1Q99933 345 aaPredicted RBP8.38□□□□□ -1.07
TSC1-201ENST00000298552 LRP2BPQ9P2M1 347 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 SAMM50Q9Y512 469 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 GSNP06396 782 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 TNNC1P63316 161 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 TCERG1LQ5VWI1 586 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 EXOC1Q9NV70 894 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 TOP2AP11388 1531 aaKnown RBP8.38□□□□□ -1.07
TSC1-201ENST00000298552 UBXN8O00124 270 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 LAMC2Q13753 1193 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 AMOTL2Q9Y2J4 779 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 TEX28O15482 410 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 TUBB2AQ13885 445 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 CCDC93Q567U6 631 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 HDXQ7Z353 690 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.38□□□□□ -1.074e-6■■□□□ 11.7
TSC1-201ENST00000298552 IFT20Q8IY31 132 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 RPS6KC1Q96S38 1066 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 EFHD1Q9BUP0 239 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 TUBB2BQ9BVA1 445 aa8.38□□□□□ -1.07
TSC1-201ENST00000298552 MTRF1O75570 445 aaKnown RBP8.37□□□□□ -1.07
TSC1-201ENST00000298552 LCA5Q86VQ0 697 aa8.37□□□□□ -1.07
TSC1-201ENST00000298552 AIDAQ96BJ3 306 aa8.37□□□□□ -1.07
TSC1-201ENST00000298552 RABEP2Q9H5N1 569 aa8.37□□□□□ -1.07
TSC1-201ENST00000298552 TRAK2O60296 914 aa8.37□□□□□ -1.07
TSC1-201ENST00000298552 NR1I2O75469 434 aa8.37□□□□□ -1.07
TSC1-201ENST00000298552 BAG3O95817 575 aa8.37□□□□□ -1.07
TSC1-201ENST00000298552 GNAI2P04899 355 aa8.37□□□□□ -1.07
TSC1-201ENST00000298552 TTF1Q15361 905 aaPredicted RBP8.37□□□□□ -1.07
TSC1-201ENST00000298552 SEL1L2Q5TEA6 688 aa8.37□□□□□ -1.07
TSC1-201ENST00000298552 ENAHQ8N8S7 591 aaPredicted RBP8.37□□□□□ -1.07
TSC1-201ENST00000298552 MIS12Q9H081 205 aa8.37□□□□□ -1.07
TSC1-201ENST00000298552 MAFGO15525 162 aa8.37□□□□□ -1.07
TSC1-201ENST00000298552 EVI5O60447 810 aa8.37□□□□□ -1.07
TSC1-201ENST00000298552 ANKRD20A4Q4UJ75 823 aa8.37□□□□□ -1.07
TSC1-201ENST00000298552 ANKRD20A8PQ5CZ79 823 aa8.37□□□□□ -1.07
TSC1-201ENST00000298552 ANKRD20A2Q5SQ80 823 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms