RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 RAD50Q92878 1312 aa29.75■■■□□ 2.35
GTF2A1-201ENST00000298173 C6orf229H3BNL8 230 aa29.74■■■□□ 2.35
GTF2A1-201ENST00000298173 EPB41L2O43491 1005 aaKnown RBP29.74■■■□□ 2.35
GTF2A1-201ENST00000298173 RBM25P49756 843 aaKnown RBP29.74■■■□□ 2.35
GTF2A1-201ENST00000298173 ZFYP08048 801 aaPredicted RBP29.73■■■□□ 2.35
GTF2A1-201ENST00000298173 LRRFIP1Q32MZ4 808 aaKnown RBP29.73■■■□□ 2.35
GTF2A1-201ENST00000298173 ZMYM1Q5SVZ6 1142 aa29.73■■■□□ 2.35
GTF2A1-201ENST00000298173 ZNF804AQ7Z570 1209 aa29.73■■■□□ 2.35
GTF2A1-201ENST00000298173 RTFDC1Q9BY42 306 aaPredicted RBP29.72■■■□□ 2.35
GTF2A1-201ENST00000298173 IL1R1P14778 569 aa29.72■■■□□ 2.35
GTF2A1-201ENST00000298173 HELLSQ9NRZ9 838 aa29.72■■■□□ 2.35
GTF2A1-201ENST00000298173 BRCA1P38398 1863 aaKnown RBP29.71■■■□□ 2.35
GTF2A1-201ENST00000298173 SLFNL1Q499Z3 407 aa29.71■■■□□ 2.35
GTF2A1-201ENST00000298173 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.71■■■□□ 2.35
GTF2A1-201ENST00000298173 CD209Q9NNX6 404 aa29.71■■■□□ 2.35
GTF2A1-201ENST00000298173 MCMDC2Q4G0Z9 681 aa29.7■■■□□ 2.35
GTF2A1-201ENST00000298173 LSG1Q9H089 658 aaKnown RBP29.7■■■□□ 2.35
GTF2A1-201ENST00000298173 ADD2P35612 726 aa29.69■■■□□ 2.34
GTF2A1-201ENST00000298173 GRIPAP1Q4V328 841 aa29.69■■■□□ 2.34
GTF2A1-201ENST00000298173 ZSCAN25Q6NSZ9 544 aa29.69■■■□□ 2.34
GTF2A1-201ENST00000298173 SEC62Q99442 399 aaKnown RBP29.69■■■□□ 2.34
GTF2A1-201ENST00000298173 ANO2Q9NQ90 1003 aa29.69■■■□□ 2.34
GTF2A1-201ENST00000298173 PIM2Q9P1W9 311 aa29.69■■■□□ 2.34
GTF2A1-201ENST00000298173 C21orf2O43822 256 aa29.68■■■□□ 2.34
GTF2A1-201ENST00000298173 FRAT2O75474 233 aaPredicted RBP29.68■■■□□ 2.34
GTF2A1-201ENST00000298173 IDH1O75874 414 aaKnown RBP29.68■■■□□ 2.34
GTF2A1-201ENST00000298173 UBE3CQ15386 1083 aa29.68■■■□□ 2.34
GTF2A1-201ENST00000298173 SLC9C2Q5TAH2 1124 aa29.68■■■□□ 2.34
GTF2A1-201ENST00000298173 ZNF589Q86UQ0 364 aaPredicted RBP29.68■■■□□ 2.34
GTF2A1-201ENST00000298173 ZC3H12CQ9C0D7 883 aaKnown RBP29.68■■■□□ 2.34
GTF2A1-201ENST00000298173 SPON1Q9HCB6 807 aa29.68■■■□□ 2.34
GTF2A1-201ENST00000298173 ZNF219Q9P2Y4 722 aaPredicted RBP29.68■■■□□ 2.34
GTF2A1-201ENST00000298173 WASHC4Q2M389 1173 aa29.67■■■□□ 2.34
GTF2A1-201ENST00000298173 WWC3Q9ULE0 1092 aa29.67■■■□□ 2.34
GTF2A1-201ENST00000298173 TCRBV5S4A2TA0A5A2 114 aa29.66■■■□□ 2.34
GTF2A1-201ENST00000298173 MAP3K12Q12852 859 aa29.66■■■□□ 2.34
GTF2A1-201ENST00000298173 APPBP2Q92624 585 aa29.66■■■□□ 2.34
GTF2A1-201ENST00000298173 OSBP2Q969R2 916 aa29.66■■■□□ 2.34
GTF2A1-201ENST00000298173 EYA3Q99504 573 aa29.66■■■□□ 2.34
GTF2A1-201ENST00000298173 COA1Q9GZY4 146 aa29.66■■■□□ 2.34
GTF2A1-201ENST00000298173 CHD4Q14839 1912 aa29.66■■■□□ 2.34
GTF2A1-201ENST00000298173 PDE6AP16499 860 aa29.66■■■□□ 2.34
GTF2A1-201ENST00000298173 KIAA1211Q6ZU35 1233 aa29.66■■■□□ 2.34
GTF2A1-201ENST00000298173 SALL1Q9NSC2 1324 aa29.65■■■□□ 2.34
GTF2A1-201ENST00000298173 RIMBP2O15034 1052 aa29.65■■■□□ 2.34
GTF2A1-201ENST00000298173 PTH1RQ03431 593 aa29.64■■■□□ 2.34
GTF2A1-201ENST00000298173 LRP2BPQ9P2M1 347 aa29.64■■■□□ 2.34
GTF2A1-201ENST00000298173 MAST3O60307 1309 aa29.64■■■□□ 2.33
GTF2A1-201ENST00000298173 WDR66Q8TBY9 1149 aa29.63■■■□□ 2.33
GTF2A1-201ENST00000298173 KIF2CQ99661 725 aa29.63■■■□□ 2.33
GTF2A1-201ENST00000298173 PPP1R1BQ9UD71 204 aaPredicted RBP29.63■■■□□ 2.33
GTF2A1-201ENST00000298173 ABCF2Q9UG63 623 aa29.63■■■□□ 2.33
GTF2A1-201ENST00000298173 CCDC171Q6TFL3 1326 aa29.63■■■□□ 2.33
GTF2A1-201ENST00000298173 ZNF532Q9HCE3 1301 aa29.63■■■□□ 2.33
GTF2A1-201ENST00000298173 CCDC93Q567U6 631 aa29.63■■■□□ 2.33
GTF2A1-201ENST00000298173 RTKN2Q8IZC4 609 aa29.63■■■□□ 2.33
GTF2A1-201ENST00000298173 MAP4K1Q92918 833 aa29.63■■■□□ 2.33
GTF2A1-201ENST00000298173 PUS7LQ9H0K6 701 aaKnown RBP29.63■■■□□ 2.33
GTF2A1-201ENST00000298173 IGSF3O75054 1194 aa29.62■■■□□ 2.33
GTF2A1-201ENST00000298173 CHAF1AQ13111 956 aaPredicted RBP29.62■■■□□ 2.33
GTF2A1-201ENST00000298173 CCDC129Q6ZRS4 1044 aa29.62■■■□□ 2.33
GTF2A1-201ENST00000298173 M0R2C6 588 aa29.61■■■□□ 2.33
GTF2A1-201ENST00000298173 DALRD3Q5D0E6 543 aaKnown RBP29.61■■■□□ 2.33
GTF2A1-201ENST00000298173 MAGEB6Q8N7X4 407 aa29.61■■■□□ 2.33
GTF2A1-201ENST00000298173 FAM205AQ6ZU69 1335 aa29.61■■■□□ 2.33
GTF2A1-201ENST00000298173 SUPT20HQ8NEM7 779 aa29.6■■■□□ 2.33
GTF2A1-201ENST00000298173 PSMD1Q99460 953 aa29.6■■■□□ 2.33
GTF2A1-201ENST00000298173 HSPA4P34932 840 aa29.6■■■□□ 2.33
GTF2A1-201ENST00000298173 SOGA3Q5TF21 947 aa29.6■■■□□ 2.33
GTF2A1-201ENST00000298173 ZGPATQ8N5A5 531 aaKnown RBP29.6■■■□□ 2.33
GTF2A1-201ENST00000298173 ZNF384Q8TF68 577 aa29.6■■■□□ 2.33
GTF2A1-201ENST00000298173 ERICH6Q7L0X2 663 aa29.59■■■□□ 2.33
GTF2A1-201ENST00000298173 IL17RAQ96F46 866 aa29.59■■■□□ 2.33
GTF2A1-201ENST00000298173 CCDC88AQ3V6T2 1871 aa29.59■■■□□ 2.33
GTF2A1-201ENST00000298173 KIAA2012Q0VF49 1180 aa29.58■■■□□ 2.33
GTF2A1-201ENST00000298173 RAI14Q9P0K7 980 aa29.58■■■□□ 2.33
GTF2A1-201ENST00000298173 JAG2Q9Y219 1238 aa29.58■■■□□ 2.33
GTF2A1-201ENST00000298173 ANP32AP39687 249 aaKnown RBP29.57■■■□□ 2.32
GTF2A1-201ENST00000298173 DOK7Q18PE1 504 aa29.57■■■□□ 2.32
GTF2A1-201ENST00000298173 TMED8Q6PL24 325 aaPredicted RBP29.57■■■□□ 2.32
GTF2A1-201ENST00000298173 PODNQ7Z5L7 613 aa29.57■■■□□ 2.32
GTF2A1-201ENST00000298173 KLHL34Q8N239 644 aa29.57■■■□□ 2.32
GTF2A1-201ENST00000298173 NSUN4Q96CB9 384 aaKnown RBP29.57■■■□□ 2.32
GTF2A1-201ENST00000298173 PRDX5P30044 214 aa29.56■■■□□ 2.32
GTF2A1-201ENST00000298173 NECTIN1Q15223 517 aa29.56■■■□□ 2.32
GTF2A1-201ENST00000298173 SPTY2D1Q68D10 685 aaPredicted RBP29.56■■■□□ 2.32
GTF2A1-201ENST00000298173 KCNB2Q92953 911 aa29.56■■■□□ 2.32
GTF2A1-201ENST00000298173 MCCP23508 829 aa29.55■■■□□ 2.32
GTF2A1-201ENST00000298173 NLGN2Q8NFZ4 835 aa29.55■■■□□ 2.32
GTF2A1-201ENST00000298173 DSCC1Q9BVC3 393 aa29.55■■■□□ 2.32
GTF2A1-201ENST00000298173 FER1L6Q2WGJ9 1857 aa29.55■■■□□ 2.32
GTF2A1-201ENST00000298173 GPAA1O43292 621 aa29.54■■■□□ 2.32
GTF2A1-201ENST00000298173 HSPD1P10809 573 aaKnown RBP29.54■■■□□ 2.32
GTF2A1-201ENST00000298173 ANAPC15P60006 121 aa29.54■■■□□ 2.32
GTF2A1-201ENST00000298173 MECOMQ03112 1051 aa29.54■■■□□ 2.32
GTF2A1-201ENST00000298173 VPS53Q5VIR6 699 aa29.54■■■□□ 2.32
GTF2A1-201ENST00000298173 TBC1D22AQ8WUA7 517 aa29.54■■■□□ 2.32
GTF2A1-201ENST00000298173 VPS33BQ9H267 617 aa29.54■■■□□ 2.32
GTF2A1-201ENST00000298173 PALD1Q9ULE6 856 aa29.54■■■□□ 2.32
GTF2A1-201ENST00000298173 RBM8AQ9Y5S9 174 aaKnown RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms