RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 SPATA31A1Q5TZJ5 1347 aa13.89□□□□□ -0.19
RHO-201ENST00000296271 LOC102724428A0A0B4J2F2 783 aa13.89□□□□□ -0.19
RHO-201ENST00000296271 ADD1P35611 737 aaKnown RBP13.89□□□□□ -0.19
RHO-201ENST00000296271 SIK1P57059 783 aa13.89□□□□□ -0.19
RHO-201ENST00000296271 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.89□□□□□ -0.19
RHO-201ENST00000296271 AGXT2Q9BYV1 514 aa13.89□□□□□ -0.19
RHO-201ENST00000296271 ZNF532Q9HCE3 1301 aa13.88□□□□□ -0.19
RHO-201ENST00000296271 PRC1O43663 620 aa13.88□□□□□ -0.19
RHO-201ENST00000296271 PHF14O94880 888 aa13.88□□□□□ -0.19
RHO-201ENST00000296271 APPP05067 770 aa13.88□□□□□ -0.19
RHO-201ENST00000296271 ILDR1Q86SU0 546 aaPredicted RBP13.88□□□□□ -0.19
RHO-201ENST00000296271 TBC1D10CQ8IV04 446 aa13.88□□□□□ -0.19
RHO-201ENST00000296271 ADD2P35612 726 aa13.88□□□□□ -0.19
RHO-201ENST00000296271 FAM182BQ5T319 152 aa13.88□□□□□ -0.19
RHO-201ENST00000296271 C3orf67Q6ZVT6 689 aa13.88□□□□□ -0.19
RHO-201ENST00000296271 CCDC87Q9NVE4 849 aa13.88□□□□□ -0.19
RHO-201ENST00000296271 MYH3P11055 1940 aa13.88□□□□□ -0.19
RHO-201ENST00000296271 ERCC4Q92889 916 aaPredicted RBP13.87□□□□□ -0.19
RHO-201ENST00000296271 HPS5Q9UPZ3 1129 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 TACC3Q9Y6A5 838 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 EP400Q96L91 3159 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 KLF18A0A0U1RQI7 1052 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 UBE2Q2LH0YL09 131 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 SMIM22K7EJ46 135 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 CAMTA2O94983 1202 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 ADCY5O95622 1261 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 HMGB1P09429 215 aaKnown RBP13.87□□□□□ -0.19
RHO-201ENST00000296271 MSNP26038 577 aaKnown RBP13.87□□□□□ -0.19
RHO-201ENST00000296271 BCAMP50895 628 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 RASGRF1Q13972 1273 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 IMMTQ16891 758 aaKnown RBP13.87□□□□□ -0.19
RHO-201ENST00000296271 CYB5R4Q7L1T6 521 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 CCDC144CPQ8IYA2 1237 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 MB21D2Q8IYB1 491 aaPredicted RBP13.87□□□□□ -0.19
RHO-201ENST00000296271 C17orf53Q8N3J3 647 aaPredicted RBP13.87□□□□□ -0.19
RHO-201ENST00000296271 CCDC24Q8N4L8 307 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 AIFM3Q96NN9 605 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 USP28Q96RU2 1077 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
RHO-201ENST00000296271 TAF1P21675 1872 aa13.87□□□□□ -0.19
RHO-201ENST00000296271 PDE6AP16499 860 aa13.86□□□□□ -0.19
RHO-201ENST00000296271 BICD2Q8TD16 824 aa13.86□□□□□ -0.19
RHO-201ENST00000296271 FBXO3Q9UK99 471 aa13.86□□□□□ -0.19
RHO-201ENST00000296271 NOL7Q9UMY1 257 aaKnown RBP13.86□□□□□ -0.19
RHO-201ENST00000296271 ANKRD36CQ5JPF3 1778 aa13.86□□□□□ -0.19
RHO-201ENST00000296271 SALL1Q9NSC2 1324 aa13.86□□□□□ -0.19
RHO-201ENST00000296271 GOLGA6L4A6NEF3 574 aa13.86□□□□□ -0.19
RHO-201ENST00000296271 ERVV-1B6SEH8 477 aa13.86□□□□□ -0.19
RHO-201ENST00000296271 PRKAB2O43741 272 aa13.86□□□□□ -0.19
RHO-201ENST00000296271 BICDL1Q6ZP65 573 aa13.86□□□□□ -0.19
RHO-201ENST00000296271 NUP62CLQ9H1M0 184 aa13.86□□□□□ -0.19
RHO-201ENST00000296271 GOLGB1Q14789 3259 aaKnown RBP13.86□□□□□ -0.19
RHO-201ENST00000296271 ZNF213O14771 459 aa13.85□□□□□ -0.19
RHO-201ENST00000296271 PTMAP06454 111 aaKnown RBP13.85□□□□□ -0.19
RHO-201ENST00000296271 FGFR2P21802 821 aa13.85□□□□□ -0.19
RHO-201ENST00000296271 SLC51AQ86UW1 340 aa13.85□□□□□ -0.19
RHO-201ENST00000296271 LUZP1Q86V48 1076 aa13.85□□□□□ -0.19
RHO-201ENST00000296271 MYL10Q9BUA6 226 aa13.85□□□□□ -0.19
RHO-201ENST00000296271 GOLGA8BA8MQT2 603 aa13.85□□□□□ -0.19
RHO-201ENST00000296271 CTDSPL2Q05D32 466 aa13.85□□□□□ -0.19
RHO-201ENST00000296271 FAM98CQ17RN3 349 aaKnown RBP13.85□□□□□ -0.19
RHO-201ENST00000296271 CSPP1Q1MSJ5 1256 aa13.85□□□□□ -0.19
RHO-201ENST00000296271 SCAND2PQ9GZW5 306 aaPredicted RBP13.85□□□□□ -0.19
RHO-201ENST00000296271 GOLPH3LQ9H4A5 285 aa13.85□□□□□ -0.19
RHO-201ENST00000296271 TTC12Q9H892 705 aaPredicted RBP13.85□□□□□ -0.19
RHO-201ENST00000296271 ARMT1Q9H993 441 aa13.85□□□□□ -0.19
RHO-201ENST00000296271 MRVI1Q9Y6F6 885 aa13.85□□□□□ -0.19
RHO-201ENST00000296271 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.85□□□□□ -0.19
RHO-201ENST00000296271 MYH7P12883 1935 aa13.85□□□□□ -0.19
RHO-201ENST00000296271 ELP1O95163 1332 aa13.85□□□□□ -0.19
RHO-201ENST00000296271 TCRBV5S4A2TA0A5A2 114 aa13.84□□□□□ -0.19
RHO-201ENST00000296271 B4E1Z4 1266 aa13.84□□□□□ -0.19
RHO-201ENST00000296271 POLR3DP05423 398 aaPredicted RBP13.84□□□□□ -0.19
RHO-201ENST00000296271 ZFYP08048 801 aaPredicted RBP13.84□□□□□ -0.19
RHO-201ENST00000296271 MAGEB6Q8N7X4 407 aa13.84□□□□□ -0.19
RHO-201ENST00000296271 UTP14AQ9BVJ6 771 aaKnown RBP13.84□□□□□ -0.19
RHO-201ENST00000296271 EPB41L4AQ9HCS5 686 aaPredicted RBP13.84□□□□□ -0.19
RHO-201ENST00000296271 CARMIL3Q8ND23 1372 aa13.84□□□□□ -0.19
RHO-201ENST00000296271 PLCH1Q4KWH8 1693 aa13.84□□□□□ -0.19
RHO-201ENST00000296271 PUM3Q15397 648 aaKnown RBP13.84□□□□□ -0.19
RHO-201ENST00000296271 MPHOSPH8Q99549 860 aa13.84□□□□□ -0.19
RHO-201ENST00000296271 TNMDQ9H2S6 317 aa13.84□□□□□ -0.19
RHO-201ENST00000296271 ZKSCAN5Q9Y2L8 839 aa13.84□□□□□ -0.19
RHO-201ENST00000296271 SPEF2Q9C093 1822 aa13.84□□□□□ -0.19
RHO-201ENST00000296271 NEDD4P46934 1319 aa13.84□□□□□ -0.19
RHO-201ENST00000296271 TYRO3Q06418 890 aa13.83□□□□□ -0.19
RHO-201ENST00000296271 MIGA1Q8NAN2 632 aa13.83□□□□□ -0.19
RHO-201ENST00000296271 SPATA5Q8NB90 893 aa13.83□□□□□ -0.19
RHO-201ENST00000296271 ZNF274Q96GC6 653 aaPredicted RBP13.83□□□□□ -0.19
RHO-201ENST00000296271 MBD4O95243 580 aa13.83□□□□□ -0.2
RHO-201ENST00000296271 NTSR2O95665 410 aa13.83□□□□□ -0.2
RHO-201ENST00000296271 ARID4AP29374 1257 aaPredicted RBP13.83□□□□□ -0.2
RHO-201ENST00000296271 MCM5P33992 734 aa13.83□□□□□ -0.2
RHO-201ENST00000296271 MAP3K11Q16584 847 aa13.83□□□□□ -0.2
RHO-201ENST00000296271 SPC24Q8NBT2 197 aa13.83□□□□□ -0.2
RHO-201ENST00000296271 LPIN2Q92539 896 aa13.83□□□□□ -0.2
RHO-201ENST00000296271 FBXW7Q969H0 707 aa13.83□□□□□ -0.2
RHO-201ENST00000296271 LLPHQ9BRT6 129 aaKnown RBP13.83□□□□□ -0.2
RHO-201ENST00000296271 CTNNA3Q9UI47 895 aa13.83□□□□□ -0.2
RHO-201ENST00000296271 ANO6Q4KMQ2 910 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms