RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 SLC3A2P08195 630 aaKnown RBP12.69□□□□□ -0.38
ACTC1-201ENST00000290378 GCKRQ14397 625 aa12.69□□□□□ -0.38
ACTC1-201ENST00000290378 KIF2AO00139 706 aaPredicted RBP12.69□□□□□ -0.38
ACTC1-201ENST00000290378 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
ACTC1-201ENST00000290378 ANKRD1Q15327 319 aa12.69□□□□□ -0.38
ACTC1-201ENST00000290378 LRRFIP1Q32MZ4 808 aaKnown RBP12.69□□□□□ -0.38
ACTC1-201ENST00000290378 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
ACTC1-201ENST00000290378 TPCN1Q9ULQ1 816 aa12.69□□□□□ -0.38
ACTC1-201ENST00000290378 NEMFO60524 1076 aa12.68□□□□□ -0.38
ACTC1-201ENST00000290378 CLCN6P51797 869 aa12.68□□□□□ -0.38
ACTC1-201ENST00000290378 UBASH3AP57075 661 aa12.68□□□□□ -0.38
ACTC1-201ENST00000290378 SLC4A8Q2Y0W8 1093 aa12.68□□□□□ -0.38
ACTC1-201ENST00000290378 CREB3L3Q68CJ9 461 aa12.68□□□□□ -0.38
ACTC1-201ENST00000290378 DZIP3Q86Y13 1208 aaKnown RBP12.68□□□□□ -0.38
ACTC1-201ENST00000290378 DBNDD2Q9BQY9 259 aa12.68□□□□□ -0.38
ACTC1-201ENST00000290378 METTL22Q9BUU2 404 aaPredicted RBP12.68□□□□□ -0.38
ACTC1-201ENST00000290378 NCOA5Q9HCD5 579 aaKnown RBP12.68□□□□□ -0.38
ACTC1-201ENST00000290378 OVOS2A0A0J9YW53 1432 aa12.68□□□□□ -0.38
ACTC1-201ENST00000290378 OVOS2Q6IE36 1432 aa12.68□□□□□ -0.38
ACTC1-201ENST00000290378 NMIQ13287 307 aaPredicted RBP12.68□□□□□ -0.38
ACTC1-201ENST00000290378 DNAJC21Q5F1R6 531 aaKnown RBP12.68□□□□□ -0.38
ACTC1-201ENST00000290378 RASSF8Q8NHQ8 419 aa12.68□□□□□ -0.38
ACTC1-201ENST00000290378 RAI14Q9P0K7 980 aa12.68□□□□□ -0.38
ACTC1-201ENST00000290378 MYO1CO00159 1063 aa12.67□□□□□ -0.38
ACTC1-201ENST00000290378 GSDMDP57764 484 aa12.67□□□□□ -0.38
ACTC1-201ENST00000290378 XPO4Q9C0E2 1151 aaKnown RBP12.67□□□□□ -0.38
ACTC1-201ENST00000290378 HIP1O00291 1037 aa12.67□□□□□ -0.38
ACTC1-201ENST00000290378 SMC1AQ14683 1233 aaKnown RBP12.67□□□□□ -0.38
ACTC1-201ENST00000290378 CCDC129Q6ZRS4 1044 aa12.67□□□□□ -0.38
ACTC1-201ENST00000290378 Q6ZUG5 572 aa12.67□□□□□ -0.38
ACTC1-201ENST00000290378 CAGE1Q8TC20 777 aa12.67□□□□□ -0.38
ACTC1-201ENST00000290378 CLSTN2Q9H4D0 955 aa12.67□□□□□ -0.38
ACTC1-201ENST00000290378 NEURL1BA8MQ27 555 aa12.67□□□□□ -0.38
ACTC1-201ENST00000290378 EP400NLQ6ZTU2 488 aa12.67□□□□□ -0.38
ACTC1-201ENST00000290378 EVI5LQ96CN4 794 aa12.67□□□□□ -0.38
ACTC1-201ENST00000290378 SPATA31A3Q5VYP0 1347 aa12.66□□□□□ -0.38
ACTC1-201ENST00000290378 PCMTD1Q96MG8 357 aaPredicted RBP12.66□□□□□ -0.38
ACTC1-201ENST00000290378 TMX4Q9H1E5 349 aaPredicted RBP12.66□□□□□ -0.38
ACTC1-201ENST00000290378 LRP2BPQ9P2M1 347 aa12.66□□□□□ -0.38
ACTC1-201ENST00000290378 NIP7Q9Y221 180 aaKnown RBP eCLIP12.66□□□□□ -0.38
ACTC1-201ENST00000290378 CDC42BPGQ6DT37 1551 aa12.66□□□□□ -0.38
ACTC1-201ENST00000290378 MORC2Q9Y6X9 1032 aaPredicted RBP12.66□□□□□ -0.38
ACTC1-201ENST00000290378 ANKRD18BA2A2Z9 1011 aa12.66□□□□□ -0.38
ACTC1-201ENST00000290378 JAG2Q9Y219 1238 aa12.66□□□□□ -0.38
ACTC1-201ENST00000290378 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.66□□□□□ -0.38
ACTC1-201ENST00000290378 USP31Q70CQ4 1352 aa12.66□□□□□ -0.38
ACTC1-201ENST00000290378 MYOM1P52179 1685 aa12.66□□□□□ -0.38
ACTC1-201ENST00000290378 ANKARQ7Z5J8 1434 aa12.66□□□□□ -0.38
ACTC1-201ENST00000290378 DLC1Q96QB1 1528 aa12.65□□□□□ -0.38
ACTC1-201ENST00000290378 ST5P78524 1137 aa12.65□□□□□ -0.38
ACTC1-201ENST00000290378 MAP2P11137 1827 aaKnown RBP12.65□□□□□ -0.38
ACTC1-201ENST00000290378 HOXB7P09629 217 aa12.65□□□□□ -0.38
ACTC1-201ENST00000290378 IGHMBP2P38935 993 aaKnown RBP12.65□□□□□ -0.38
ACTC1-201ENST00000290378 EAF2Q96CJ1 260 aaPredicted RBP12.65□□□□□ -0.38
ACTC1-201ENST00000290378 MED14O60244 1454 aa12.65□□□□□ -0.38
ACTC1-201ENST00000290378 RIMS1Q86UR5 1692 aaKnown RBP12.65□□□□□ -0.38
ACTC1-201ENST00000290378 APOBRQ0VD83 1088 aa12.65□□□□□ -0.38
ACTC1-201ENST00000290378 WWC3Q9ULE0 1092 aa12.65□□□□□ -0.38
ACTC1-201ENST00000290378 ZPR1O75312 459 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 EIF3JO75822 258 aaKnown RBP12.64□□□□□ -0.39
ACTC1-201ENST00000290378 PNMA6AP0CW24 399 aaPredicted RBP12.64□□□□□ -0.39
ACTC1-201ENST00000290378 DESI2Q9BSY9 194 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 FAM107BQ9H098 131 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 TLR7Q9NYK1 1049 aaKnown RBP12.64□□□□□ -0.39
ACTC1-201ENST00000290378 TPM1P09493 284 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 PLBD2Q8NHP8 589 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 NEK1Q96PY6 1258 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 BABAM1Q9NWV8 329 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 DIP2AQ14689 1571 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 A0A1B0GUL7 405 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 PPP2R3AQ06190 1150 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 VPS53Q5VIR6 699 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 SSH3Q8TE77 659 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 SMARCE1Q969G3 411 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
ACTC1-201ENST00000290378 RRP15Q9Y3B9 282 aaKnown RBP12.64□□□□□ -0.39
ACTC1-201ENST00000290378 IQSEC2Q5JU85 1478 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 TECPR2O15040 1411 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 IRS4O14654 1257 aaPredicted RBP12.64□□□□□ -0.39
ACTC1-201ENST00000290378 ZSCAN12O43309 604 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 DNA2P51530 1060 aa12.64□□□□□ -0.39
ACTC1-201ENST00000290378 PTCH1Q13635 1447 aa12.63□□□□□ -0.39
ACTC1-201ENST00000290378 CCP110O43303 1012 aa12.63□□□□□ -0.39
ACTC1-201ENST00000290378 ERLIN1O75477 346 aa12.63□□□□□ -0.39
ACTC1-201ENST00000290378 RDXP35241 583 aaKnown RBP12.63□□□□□ -0.39
ACTC1-201ENST00000290378 TRIM29Q14134 588 aa12.63□□□□□ -0.39
ACTC1-201ENST00000290378 PPFIBP1Q86W92 1011 aa12.63□□□□□ -0.39
ACTC1-201ENST00000290378 RGS22Q8NE09 1264 aa12.63□□□□□ -0.39
ACTC1-201ENST00000290378 MYCBPQ99417 103 aaPredicted RBP12.63□□□□□ -0.39
ACTC1-201ENST00000290378 C1orf167Q5SNV9 1468 aa12.63□□□□□ -0.39
ACTC1-201ENST00000290378 WDR17Q8IZU2 1322 aa12.63□□□□□ -0.39
ACTC1-201ENST00000290378 SAMD1Q6SPF0 538 aaPredicted RBP12.63□□□□□ -0.39
ACTC1-201ENST00000290378 TEX13AQ9BXU3 409 aaPredicted RBP12.63□□□□□ -0.39
ACTC1-201ENST00000290378 JRKLQ9Y4A0 524 aa12.63□□□□□ -0.39
ACTC1-201ENST00000290378 MINDY4BA8MYZ0 360 aa12.62□□□□□ -0.39
ACTC1-201ENST00000290378 TSR1Q2NL82 804 aaKnown RBP12.62□□□□□ -0.39
ACTC1-201ENST00000290378 WWC2Q6AWC2 1192 aa12.62□□□□□ -0.39
ACTC1-201ENST00000290378 LONRF3Q496Y0 759 aa12.62□□□□□ -0.39
ACTC1-201ENST00000290378 CT47A1Q5JQC4 288 aaPredicted RBP12.62□□□□□ -0.39
ACTC1-201ENST00000290378 C8orf76Q96K31 380 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms